Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow5G0179 Salvia bowleyana HOM05D005747 ORTHO05D007159 6.1e-52 207.2 106 100.0
SalBow5G1412 Salvia bowleyana HOM05D005747 ORTHO05D007159 6.1e-52 207.2 106 100.0
Migut.L01698 Erythranthe guttata HOM05D005747 ORTHO05D007159 3.0e-43 178.3 106 80.2
vmacro07288 Vaccinium macrocarpon HOM05D005747 ORTHO05D007159 2.6e-42 175.3 106 79.2
Actinidia28901 Actinidia chinensis HOM05D005747 ORTHO05D007159 5.7e-42 174.1 106 78.3
MSTRG.19175 Avicennia marina HOM05D005747 ORTHO05D007159 5.7e-42 174.1 106 79.2
Actinidia08777 Actinidia chinensis HOM05D005747 ORTHO05D007159 7.5e-42 173.7 106 78.3
CSS0033757 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 4.9e-41 171.0 106 78.3
Rhsim03G0092400 Rhododendron simsii HOM05D005747 ORTHO05D007159 1.1e-40 169.9 106 77.4
Hma1.2p1_0205F.1_g087080 Hydrangea macrophylla HOM05D005747 ORTHO05D007159 2.0e-39 165.6 104 76.0
TWI74G1168 Tripterygium wilfordii HOM05D005747 ORTHO05D007159 2.7e-39 165.2 105 76.2
Haze_20552 Corylus avellana HOM05D005747 ORTHO05D007159 3.5e-39 164.9 105 73.3
Cfa020071 Carpinus fangiana HOM05D005747 ORTHO05D007159 4.5e-39 164.5 105 72.4
Haze_20124 Corylus avellana HOM05D005747 ORTHO05D007159 7.8e-39 163.7 105 72.4
CSS0022084 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 1.0e-38 163.3 106 74.5
Cc06_g04180 Coffea canephora HOM05D005747 ORTHO05D007159 1.0e-38 163.3 106 73.6
Atru.chr8.1820 Acer truncatum HOM05D005747 ORTHO05D007159 1.3e-38 162.9 105 73.3
arahy.Tifrunner.gnm1.ann1.548B55 Arachis hypogaea HOM05D005747 ORTHO05D007159 1.3e-38 162.9 105 73.3
QL07p043606 Quercus lobata HOM05D005747 ORTHO05D007159 1.3e-38 162.9 105 74.3
arahy.Tifrunner.gnm1.ann1.GC88CS Arachis hypogaea HOM05D005747 ORTHO05D007159 1.7e-38 162.5 105 72.4
arahy.Tifrunner.gnm1.ann1.47U1LD Arachis hypogaea HOM05D005747 ORTHO05D007159 2.9e-38 161.8 105 72.4
arahy.Tifrunner.gnm1.ann1.W5J3RK Arachis hypogaea HOM05D005747 ORTHO05D007159 3.8e-38 161.4 105 73.3
SGA_v2.0_scaffold75G24844 Striga asiatica HOM05D005747 ORTHO05D007159 3.8e-38 161.4 103 74.8
CSS0033637 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 5.0e-38 161.0 106 73.6
Psat0s2933g0080 Pisum sativum HOM05D005747 ORTHO05D007159 5.0e-38 161.0 105 72.4
Thecc.05G065200 Theobroma cacao HOM05D005747 ORTHO05D007159 6.6e-38 160.6 105 71.4
unitig_578.g16384 Utricularia gibba HOM05D005747 ORTHO05D007159 1.1e-37 159.8 101 75.2
Manes.08G009800 Manihot esculenta HOM05D005747 ORTHO05D007159 1.5e-37 159.5 105 70.5
GSVIVG01025728001 Vitis vinifera HOM05D005747 ORTHO05D007159 1.9e-37 159.1 105 72.4
Nn7g38309 Nelumbo nucifera HOM05D005747 ORTHO05D007159 4.3e-37 157.9 105 71.4
PGR004G0006 Punica granatum HOM05D005747 ORTHO05D007159 4.3e-37 157.9 105 72.4
Aqoxy1G01163 Aquilegia oxysepala HOM05D005747 ORTHO05D007159 5.6e-37 157.5 105 70.5
THA.LOC104826911 Tarenaya hassleriana HOM05D005747 ORTHO05D007159 5.6e-37 157.5 105 73.3
TWI77G0618 Tripterygium wilfordii HOM05D005747 ORTHO05D007159 5.6e-37 157.5 105 73.3
Dinv37311 Davidia involucrata HOM05D005747 ORTHO05D007159 7.3e-37 157.1 106 72.6
Potri.006G125300 Populus trichocarpa HOM05D005747 ORTHO05D007159 7.3e-37 157.1 104 69.2
Duzib093G2107 Durio zibethinus HOM05D005747 ORTHO05D007159 9.5e-37 156.8 105 69.5
TPR.G9369 Trifolium pratense HOM05D005747 ORTHO05D007159 9.5e-37 156.8 105 72.4
Duzib128G1360 Durio zibethinus HOM05D005747 ORTHO05D007159 1.6e-36 156.0 105 70.5
Medtr7g101880 Medicago truncatula HOM05D005747 ORTHO05D007159 1.6e-36 156.0 99 74.7
Peaxi162Scf00701g00029 Petunia axillaris HOM05D005747 ORTHO05D007159 1.6e-36 156.0 106 69.8
Glyma.10G057000 Glycine max HOM05D005747 ORTHO05D007159 2.1e-36 155.6 105 68.6
Glyma.13G143500 Glycine max HOM05D005747 ORTHO05D007159 2.1e-36 155.6 105 69.5
Lj5g0010104 Lotus japonicus HOM05D005747 ORTHO05D007159 2.1e-36 155.6 104 69.2
MD04G1094200 Malus domestica HOM05D005747 ORTHO05D007159 2.1e-36 155.6 105 67.6
VMungo1383G0680 Vigna mungo HOM05D005747 ORTHO05D007159 2.1e-36 155.6 105 68.6
Lalb_Chr02g0155891 Lupinus albus HOM05D005747 ORTHO05D007159 2.8e-36 155.2 104 70.2
TPR.G25697 Trifolium pratense HOM05D005747 ORTHO05D007159 3.6e-36 154.8 101 71.3
Glyma.19G183500 Glycine max HOM05D005747 ORTHO05D007159 4.7e-36 154.5 105 68.6
Solyc09g008140.3 Solanum lycopersicum HOM05D005747 ORTHO05D007159 4.7e-36 154.5 106 68.9
Sopen09g002940 Solanum pennellii HOM05D005747 ORTHO05D007159 4.7e-36 154.5 106 68.9
Medtr1g063370 Medicago truncatula HOM05D005747 ORTHO05D007159 6.1e-36 154.1 105 68.6
Psat6g073040 Pisum sativum HOM05D005747 ORTHO05D007159 8.0e-36 153.7 105 70.5
Ca_11494_v3 Cicer arietinum L. HOM05D005747 ORTHO05D007159 1.0e-35 153.3 105 70.5
MD12G1113800 Malus domestica HOM05D005747 ORTHO05D007159 1.0e-35 153.3 105 65.7
PSO063G6473 Papaver somniferum HOM05D005747 ORTHO05D007159 1.0e-35 153.3 105 66.7
PSO339G2391 Papaver somniferum HOM05D005747 ORTHO05D007159 1.0e-35 153.3 105 66.7
CAN.G900.40 Capsicum annuum HOM05D005747 ORTHO05D007159 1.4e-35 152.9 106 67.9
Thhalv10015093m.g Eutrema salsugineum HOM05D005747 ORTHO05D007159 1.4e-35 152.9 103 69.9
FAN05G2010 Fragaria x ananassa HOM05D005747 ORTHO05D007159 1.4e-35 152.9 104 68.3
Ciclev10013173m.g Citrus clementina HOM05D005747 ORTHO05D007159 1.8e-35 152.5 105 68.6
FAN02G1695 Fragaria x ananassa HOM05D005747 ORTHO05D007159 1.8e-35 152.5 104 67.3
FvH4_6g16280 Fragaria vesca HOM05D005747 ORTHO05D007159 2.3e-35 152.1 104 67.3
FAN14G5754 Fragaria x ananassa HOM05D005747 ORTHO05D007159 2.3e-35 152.1 104 67.3
RcHm_v2.0_Chr3g0470141 Rosa chinensis HOM05D005747 ORTHO05D007159 2.3e-35 152.1 104 68.3
TAR369G0407 Trochodendron aralioides HOM05D005747 ORTHO05D007159 2.3e-35 152.1 105 67.6
C02p00970 Brassica napus HOM05D001005 ORTHO05D000836 3.0e-35 151.8 103 69.9
Phvul.001G178800 Phaseolus vulgaris HOM05D005747 ORTHO05D007159 5.2e-35 151.0 105 66.7
Prupe.6G232700 Prunus persica HOM05D005747 ORTHO05D007159 5.2e-35 151.0 103 65.0
CANSAT80G0760 Cannabis sativa HOM05D005747 ORTHO05D007159 6.8e-35 150.6 105 68.6
CARHR210000 Cardamine hirsuta HOM05D005747 ORTHO05D007159 6.8e-35 150.6 103 69.9
Eucgr.A01688 Eucalyptus grandis HOM05D005747 ORTHO05D007159 6.8e-35 150.6 105 64.8
BcaC03g13014 Brassica carinata HOM05D005747 ORTHO05D007159 8.9e-35 150.2 103 68.9
FAN09G1333 Fragaria x ananassa HOM05D005747 ORTHO05D007159 2.0e-34 149.1 104 66.3
Zm00001eb136890 Zea mays HOM05D005747 ORTHO05D007159 2.0e-34 149.1 104 66.3
TAR633G0139 Trochodendron aralioides HOM05D005747 ORTHO05D007159 2.6e-34 148.7 105 68.6
Aa31LG3G2310 Aethionema arabicum HOM05D005747 ORTHO05D007159 3.4e-34 148.3 105 65.7
Gohir.D09G143100 Gossypium hirsutum HOM05D005747 ORTHO05D007159 3.4e-34 148.3 105 68.6
Gorai.006G164600 Gossypium raimondii HOM05D005747 ORTHO05D007159 3.4e-34 148.3 105 68.6
Potri.016G091900 Populus trichocarpa HOM05D005747 ORTHO05D007159 3.4e-34 148.3 104 66.3
Sp6g39390 Schrenkiella parvula HOM05D005747 ORTHO05D007159 4.4e-34 147.9 103 67.0
AL6G12680 Arabidopsis lyrata HOM05D005747 ORTHO05D007159 5.7e-34 147.5 103 68.9
Zm00001eb028740 Zea mays HOM05D005747 ORTHO05D007159 7.5e-34 147.1 105 64.8
EL10Ac1g00026 Beta vulgaris HOM05D005747 ORTHO05D007159 1.7e-33 146.0 105 66.7
MELO3C009353.2 Cucumis melo HOM05D005747 ORTHO05D007159 1.7e-33 146.0 105 64.8
Gohir.A09G147500 Gossypium hirsutum HOM05D005747 ORTHO05D007159 1.7e-33 146.0 105 67.6
CsaV3_3G035950 Cucumis sativus L. HOM05D005747 ORTHO05D007159 2.9e-33 145.2 105 64.8
ClCG10G020160 Citrullus lanatus HOM05D005747 ORTHO05D007159 3.7e-33 144.8 105 64.8
AT5G03345 Arabidopsis thaliana HOM05D005747 ORTHO05D007159 4.9e-33 144.4 103 68.0
Lalb_Chr20g0112621 Lupinus albus HOM05D005747 ORTHO05D007159 4.9e-33 144.4 105 62.9
Os12g0566400 Oryza sativa ssp. japonica HOM05D005747 ORTHO05D007159 4.9e-33 144.4 105 61.9
Manes.09G066900 Manihot esculenta HOM05D005747 ORTHO05D007159 6.4e-33 144.1 104 65.4
Carub.0006s0216 Capsella rubella HOM05D005747 ORTHO05D007159 1.1e-32 143.3 103 66.0
Sed0019850 Sechium edule HOM05D005747 ORTHO05D007159 1.4e-32 142.9 105 62.9
Sc02g0001670 Simmondsia chinensis HOM05D005747 ORTHO05D007159 1.4e-32 142.9 105 61.0
ECA233G4120 Erigeron canadensis HOM05D005747 ORTHO05D007159 4.1e-32 141.4 105 65.7
Nitab4.5_0000578g0140 Nicotiana tabacum HOM05D005747 ORTHO05D007159 4.6e-31 137.9 106 64.2
Nitab4.5_0002632g0020 Nicotiana tabacum HOM05D005747 ORTHO05D007159 4.6e-31 137.9 106 64.2
Ah.05g172440 Amaranthus hybridus HOM05D005747 ORTHO05D007159 5.9e-31 137.5 105 63.8
Lsat_1_v5_gn_6_25181 Lactuca sativa HOM05D005747 ORTHO05D007159 7.8e-31 137.1 105 62.9
Phvul.007G149300 Phaseolus vulgaris HOM05D005747 ORTHO05D007159 7.8e-31 137.1 104 62.5
HanXRQChr13g0401071 Helianthus annuus HOM05D005747 ORTHO05D007159 1.0e-30 136.7 106 63.2
PGSC0003DMG400003860 Solanum tuberosum HOM05D005747 ORTHO05D007159 6.6e-30 134.0 134 53.7
CDE06G0870 Ceratophyllum demersum HOM05D005747 ORTHO05D007159 4.3e-29 131.3 101 61.4
HPP92_009808 Vanilla planifolia HOM05D005747 ORTHO05D007159 2.8e-28 128.6 92 66.3
Oeu053677.1 Olea europaea HOM05D005747 ORTHO05D007159 3.6e-28 128.3 78 79.5
HanXRQChr02g0051611 Helianthus annuus HOM05D005747 ORTHO05D007159 1.0e-27 126.7 106 57.5
Glyma.03G182900 Glycine max HOM05D005747 ORTHO05D007159 2.3e-27 125.6 134 50.0
Lj2A1109T71 Lonicera japonica HOM05D005747 ORTHO05D007159 4.0e-27 124.8 91 67.0
Hma1.2p1_0205F.1_g087090 Hydrangea macrophylla HOM05D005747 ORTHO05D007159 6.8e-27 124.0 98 64.3
Gorai.006G061900 Gossypium raimondii HOM05D005747 ORTHO05D007159 8.9e-27 123.6 107 60.7
SEGI_15519 Sequoiadendron giganteum HOM05D005747 ORTHO05D007159 8.9e-27 123.6 100 58.0
Mapoly0011s0153 Marchantia polymorpha HOM05D005747 ORTHO05D007159 4.4e-26 121.3 99 59.6
Oeu045224.1 Olea europaea HOM05D005747 ORTHO05D007159 4.9e-25 117.9 86 68.6
Pp3c5_16080 Physcomitrium patens HOM05D005747 ORTHO05D007159 6.4e-25 117.5 96 60.4
SMO137G0056 Selaginella moellendorffii HOM05D005747 ORTHO05D007159 6.4e-25 117.5 97 59.8
DCAR_020822 Daucus carota HOM05D005747 ORTHO05D007159 1.9e-24 115.9 76 73.7
AagrBONN_evm.TU.Sc2ySwM_362.1648 Anthoceros agrestis HOM05D005747 ORTHO05D007159 2.0e-23 112.5 84 59.5
Hund20347 Selenicereus undatus HOM05D005747 ORTHO05D007159 3.5e-23 111.7 77 67.5
CSS0043170 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 1.3e-22 109.8 71 74.6
CSS0041044 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 1.7e-22 109.4 71 74.6
Pp3c6_8930 Physcomitrium patens HOM05D005747 ORTHO05D007159 1.7e-22 109.4 90 58.9
ATR0104G002 Amborella trichopoda HOM05D005747 ORTHO05D007159 8.1e-20 100.5 79 60.8
AUR62023620 Chenopodium quinoa HOM05D005747 ORTHO05D007159 1.1e-19 100.1 113 53.1
Sabra16G0097500 Salix brachista HOM05D005747 ORTHO05D007159 2.3e-19 99.0 75 61.3
CiPaw.09G219400 Carya illinoinensis HOM05D005747 ORTHO05D007159 5.2e-19 97.8 104 51.9
AUR62004704 Chenopodium quinoa HOM05D005747 ORTHO05D007159 9.8e-18 93.6 111 46.8
Sed0003931 Sechium edule HOM05D005747 ORTHO05D007159 1.7e-17 92.8 66 65.2
Lalb_Chr02g0156001 Lupinus albus HOM05D005747 ORTHO05D007159 2.1e-12 75.9 80 55.0
Dinv35784 Davidia involucrata HOM05D005747 ORTHO05D007159 2.8e-12 75.5 50 72.0
COL.COLO4_26972 Corchorus olitorius HOM05D005747 ORTHO05D007159 6.8e-11 70.9 45 71.1
MCO03G507 Micromonas commoda HOM05D005747 ORTHO05D007159 1.3e-09 66.6 89 38.2
Lalb_Chr25g0289001 Lupinus albus HOM05D005747 ORTHO05D007159 2.7e-07 58.9 43 65.1
Os11g0568633 Oryza sativa ssp. japonica HOM05D005747 ORTHO05D007159 2.7e-07 58.9 42 57.1


User provided reference genes

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