Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G3280 Salvia bowleyana HOM05D006369 ORTHO05D007764 4.1e-128 461.5 242 100.0
Migut.F00102 Erythranthe guttata HOM05D006369 ORTHO05D007764 1.7e-81 306.6 242 69.0
MSTRG.8579 Avicennia marina HOM05D006369 ORTHO05D007764 6.6e-78 294.7 237 67.1
SGA_v2.0_scaffold18G08505 Striga asiatica HOM05D006369 ORTHO05D007764 1.8e-67 260.0 242 60.7
Dinv29169 Davidia involucrata HOM05D006369 ORTHO05D007764 2.6e-58 229.6 237 53.2
Manes.08G163800 Manihot esculenta HOM05D006369 ORTHO05D007764 2.6e-58 229.6 238 55.5
Atru.chr7.1119 Acer truncatum HOM05D006369 ORTHO05D007764 5.0e-57 225.3 239 51.5
Lj1A1033G61 Lonicera japonica HOM05D006369 ORTHO05D007764 7.9e-55 218.0 245 51.4
Cc02_g00390 Coffea canephora HOM05D006369 ORTHO05D007764 1.5e-53 213.8 241 50.2
Oeu005324.1 Olea europaea HOM05D006369 ORTHO05D007764 3.3e-53 212.6 170 68.2
CiPaw.05G237500 Carya illinoinensis HOM05D006369 ORTHO05D007764 2.2e-52 209.9 247 51.0
Ciclev10021854m.g Citrus clementina HOM05D006369 ORTHO05D007764 2.2e-52 209.9 200 54.5
Nitab4.5_0000820g0010 Nicotiana tabacum HOM05D006369 ORTHO05D007764 4.8e-52 208.8 209 55.5
MELO3C024871.2 Cucumis melo HOM05D006369 ORTHO05D007764 6.3e-52 208.4 232 54.7
TAR365G0740 Trochodendron aralioides HOM05D006369 ORTHO05D007764 6.3e-52 208.4 238 52.1
Nitab4.5_0000001g0150 Nicotiana tabacum HOM05D006369 ORTHO05D007764 2.6e-50 203.0 208 54.8
ClCG10G009050 Citrullus lanatus HOM05D006369 ORTHO05D007764 5.9e-50 201.8 230 52.2
CAN.G317.12 Capsicum annuum HOM05D006369 ORTHO05D007764 7.7e-50 201.4 207 56.0
Thecc.03G000800 Theobroma cacao HOM05D006369 ORTHO05D007764 7.7e-50 201.4 227 50.2
CsaV3_4G008720 Cucumis sativus L. HOM05D006369 ORTHO05D007764 1.3e-49 200.7 238 51.3
CARHR196110 Cardamine hirsuta HOM05D006369 ORTHO05D007764 1.7e-49 200.3 224 54.0
Gohir.A07G176900 Gossypium hirsutum HOM05D006369 ORTHO05D007764 2.2e-49 199.9 236 51.3
Cfa015892 Carpinus fangiana HOM05D006369 ORTHO05D007764 3.8e-49 199.1 245 50.2
Potri.019G052400 Populus trichocarpa HOM05D006369 ORTHO05D007764 5.0e-49 198.7 234 49.1
C02p08760 Brassica napus HOM05D006369 ORTHO05D007764 1.4e-48 197.2 191 58.1
CiPaw.06G019700 Carya illinoinensis HOM05D006369 ORTHO05D007764 1.4e-48 197.2 221 50.7
Gorai.001G204600 Gossypium raimondii HOM05D006369 ORTHO05D007764 1.9e-48 196.8 234 50.9
Solyc03g062680.3 Solanum lycopersicum HOM05D006369 ORTHO05D007764 3.2e-48 196.1 203 55.2
GSVIVG01024423001 Vitis vinifera HOM05D006369 ORTHO05D007764 3.2e-48 196.1 206 53.9
A02p03940 Brassica napus HOM05D006369 ORTHO05D007764 4.2e-48 195.7 214 54.2
FAN03G1142 Fragaria x ananassa HOM05D006369 ORTHO05D007764 4.2e-48 195.7 204 52.0
FAN03G2967 Fragaria x ananassa HOM05D006369 ORTHO05D007764 4.2e-48 195.7 204 52.0
Phvul.011G021200 Phaseolus vulgaris HOM05D006369 ORTHO05D007764 5.5e-48 195.3 203 52.7
Prupe.2G324400 Prunus persica HOM05D006369 ORTHO05D007764 5.5e-48 195.3 229 48.9
Actinidia00694 Actinidia chinensis HOM05D006369 ORTHO05D007764 1.2e-47 194.1 236 47.9
BcaC03g18532 Brassica carinata HOM05D006369 ORTHO05D007764 1.2e-47 194.1 214 54.2
BolC2t06790H Brassica oleracea HOM05D006369 ORTHO05D007764 1.2e-47 194.1 214 54.2
Gohir.D07G184401 Gossypium hirsutum HOM05D006369 ORTHO05D007764 1.6e-47 193.7 235 51.1
Nn3g21321 Nelumbo nucifera HOM05D006369 ORTHO05D007764 1.6e-47 193.7 256 48.0
Sopen03g015000 Solanum pennellii HOM05D006369 ORTHO05D007764 2.1e-47 193.4 203 55.2
RcHm_v2.0_Chr1g0383921 Rosa chinensis HOM05D006369 ORTHO05D007764 2.7e-47 193.0 226 48.2
FAN10G1961 Fragaria x ananassa HOM05D006369 ORTHO05D007764 3.6e-47 192.6 228 48.2
FAN10G2535 Fragaria x ananassa HOM05D006369 ORTHO05D007764 3.6e-47 192.6 228 48.2
MD07G1306400 Malus domestica HOM05D006369 ORTHO05D007764 6.1e-47 191.8 197 53.8
BcaB01g04960 Brassica carinata HOM05D006369 ORTHO05D007764 7.9e-47 191.4 204 55.4
MD01G1234200 Malus domestica HOM05D006369 ORTHO05D007764 7.9e-47 191.4 239 49.4
PGR042G2784 Punica granatum HOM05D006369 ORTHO05D007764 7.9e-47 191.4 241 48.5
BraA02t05358Z Brassica rapa HOM05D006369 ORTHO05D007764 1.0e-46 191.0 215 54.0
Thhalv10014449m.g Eutrema salsugineum HOM05D006369 ORTHO05D007764 1.0e-46 191.0 227 51.5
FAN01G2653 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.0e-46 191.0 228 47.8
FvH4_7g33790 Fragaria vesca HOM05D006369 ORTHO05D007764 1.4e-46 190.7 228 47.8
VMungo1127G0993 Vigna mungo HOM05D006369 ORTHO05D007764 1.4e-46 190.7 222 51.4
CANSAT21G0373 Cannabis sativa HOM05D006369 ORTHO05D007764 3.9e-46 189.1 222 48.6
Sp6g27090 Schrenkiella parvula HOM05D006369 ORTHO05D007764 3.9e-46 189.1 205 51.7
Carub.0006s1525 Capsella rubella HOM05D006369 ORTHO05D007764 5.1e-46 188.7 216 51.4
HanXRQChr17g0541681 Helianthus annuus HOM05D006369 ORTHO05D007764 5.1e-46 188.7 248 48.0
Hund18049 Selenicereus undatus HOM05D006369 ORTHO05D007764 8.8e-46 188.0 234 49.6
AL6G28090 Arabidopsis lyrata HOM05D006369 ORTHO05D007764 5.7e-45 185.3 187 55.1
BcaNung00427 Brassica carinata HOM05D006369 ORTHO05D007764 9.7e-45 184.5 220 52.7
Duzib211G0044 Durio zibethinus HOM05D006369 ORTHO05D007764 2.2e-44 183.3 233 45.9
Glyma.11G092500 Glycine max HOM05D006369 ORTHO05D007764 2.8e-44 183.0 223 49.8
THA.LOC104820876 Tarenaya hassleriana HOM05D006369 ORTHO05D007764 6.3e-44 181.8 216 50.5
CSS0035893 Camellia sinensis var. sinensis HOM05D006369 ORTHO05D007764 8.2e-44 181.4 235 46.0
AT5G17070 Arabidopsis thaliana HOM05D006369 ORTHO05D007764 1.1e-43 181.0 202 52.5
Psat7g171520 Pisum sativum HOM05D006369 ORTHO05D007764 3.1e-43 179.5 243 46.1
Glyma.12G018800 Glycine max HOM05D006369 ORTHO05D007764 4.1e-43 179.1 232 47.0
arahy.Tifrunner.gnm1.ann1.WFP97B Arachis hypogaea HOM05D006369 ORTHO05D007764 5.3e-43 178.7 268 46.3
Ca_04928_v3 Cicer arietinum L. HOM05D006369 ORTHO05D007764 1.2e-42 177.6 240 45.4
Lalb_Chr19g0139881 Lupinus albus HOM05D006369 ORTHO05D007764 1.2e-42 177.6 230 46.1
Lsat_1_v5_gn_3_37940 Lactuca sativa HOM05D006369 ORTHO05D007764 1.5e-42 177.2 225 50.7
Aqoxy2G03109 Aquilegia oxysepala HOM05D006369 ORTHO05D007764 2.6e-42 176.4 243 48.6
Haze_00598 Corylus avellana HOM05D006369 ORTHO05D007764 5.9e-42 175.3 179 55.9
Eucgr.A02962 Eucalyptus grandis HOM05D006369 ORTHO05D007764 7.7e-42 174.9 201 49.8
unitig_747.g21708 Utricularia gibba HOM05D006369 ORTHO05D007764 7.7e-42 174.9 291 41.6
Sed0025457 Sechium edule HOM05D006369 ORTHO05D007764 1.0e-41 174.5 233 47.2
EL10Ac7g17391 Beta vulgaris HOM05D006369 ORTHO05D007764 2.9e-41 172.9 244 45.5
vmacro02505 Vaccinium macrocarpon HOM05D006369 ORTHO05D007764 5.0e-41 172.2 249 44.2
MBI06_g08525_MAGBIO Magnolia biondii HOM05D006369 ORTHO05D007764 6.5e-41 171.8 220 50.0
Peaxi162Scf00076g00928 Petunia axillaris HOM05D006369 ORTHO05D007764 8.5e-41 171.4 281 38.8
Sc05g0004440 Simmondsia chinensis HOM05D006369 ORTHO05D007764 1.9e-40 170.2 169 56.8
arahy.Tifrunner.gnm1.ann1.F9R2PF Arachis hypogaea HOM05D006369 ORTHO05D007764 3.2e-40 169.5 283 44.2
ECA246G2850 Erigeron canadensis HOM05D006369 ORTHO05D007764 7.2e-40 168.3 221 48.0
Aa31LG11G12610 Aethionema arabicum HOM05D006369 ORTHO05D007764 1.6e-39 167.2 226 45.6
Ah.08g212670 Amaranthus hybridus HOM05D006369 ORTHO05D007764 2.7e-39 166.4 240 46.2
Medtr4g077610 Medicago truncatula HOM05D006369 ORTHO05D007764 2.7e-39 166.4 206 47.6
PSO170G0520 Papaver somniferum HOM05D006369 ORTHO05D007764 2.0e-37 160.2 235 46.8
Psat1g047200 Pisum sativum HOM05D006369 ORTHO05D007764 2.6e-37 159.8 130 60.8
TPR.G39567 Trifolium pratense HOM05D006369 ORTHO05D007764 2.6e-37 159.8 248 43.1
Lj3g0017971 Lotus japonicus HOM05D006369 ORTHO05D007764 5.7e-37 158.7 226 44.2
PSO210G6912 Papaver somniferum HOM05D006369 ORTHO05D007764 9.7e-37 157.9 235 46.4
DCAR_020401 Daucus carota HOM05D006369 ORTHO05D007764 1.3e-36 157.5 243 42.8
Psat1g047280 Pisum sativum HOM05D006369 ORTHO05D007764 6.3e-36 155.2 118 63.6
Psat1g047240 Pisum sativum HOM05D006369 ORTHO05D007764 4.1e-35 152.5 116 62.9
HPP92_026820 Vanilla planifolia HOM05D006369 ORTHO05D007764 5.0e-33 145.6 224 44.2
CDE02G3455 Ceratophyllum demersum HOM05D006369 ORTHO05D007764 1.2e-31 141.0 216 43.1
Os06g0300700 Oryza sativa ssp. japonica HOM05D006369 ORTHO05D007764 1.0e-30 137.9 229 42.8
Rhsim13G0016700 Rhododendron simsii HOM05D006369 ORTHO05D007764 2.3e-30 136.7 281 37.0
BraA03t10137Z Brassica rapa HOM05D006369 ORTHO05D007764 4.0e-30 136.0 168 53.6
SEGI_01011 Sequoiadendron giganteum HOM05D006369 ORTHO05D007764 8.8e-30 134.8 172 48.8
Zm00001eb381130 Zea mays HOM05D006369 ORTHO05D007764 1.8e-27 127.1 192 43.8
ATR0213G006 Amborella trichopoda HOM05D006369 ORTHO05D007764 2.2e-25 120.2 173 44.5
AagrBONN_evm.TU.Sc2ySwM_344.1770 Anthoceros agrestis HOM05D006369 ORTHO05D007764 5.2e-22 109.0 168 40.5
Dinv06133 Davidia involucrata HOM05D006369 ORTHO05D007764 3.7e-20 102.8 106 50.9
Mapoly0084s0069 Marchantia polymorpha HOM05D006369 ORTHO05D007764 2.4e-19 100.1 125 43.2
CBR_g17900 Chara braunii HOM05D006369 ORTHO05D007764 4.1e-19 99.4 147 39.5
Pp3c20_5600 Physcomitrium patens HOM05D006369 ORTHO05D007764 2.2e-17 93.6 197 35.5
COL.COLO4_13442 Corchorus olitorius HOM05D006369 ORTHO05D007764 5.5e-16 89.0 180 37.2
SMO141G0301 Selaginella moellendorffii HOM05D006369 ORTHO05D007764 8.8e-14 81.6 154 37.7
Cpa.g.sc39.77 Carica papaya HOM05D006369 ORTHO05D007764 2.0e-13 80.5 50 68.0
C03p09390 Brassica napus HOM05D006369 ORTHO05D007764 2.6e-13 80.1 109 51.4
BcaB01g05232 Brassica carinata HOM05D006369 ORTHO05D007764 4.4e-13 79.3 109 51.4
Lsat_1_v5_gn_5_27580 Lactuca sativa HOM05D005974 ORTHO05D007201 4.9e-12 75.9 51 70.6
RcHm_v2.0_Chr5g0041771 Rosa chinensis HOM05D006369 ORTHO05D007764 3.5e-10 69.7 62 51.6
Sabra19G0056200 Salix brachista HOM05D006369 ORTHO05D007764 1.0e-09 68.2 49 71.4
Hma1.2p1_1235F.1_g269100 Hydrangea macrophylla HOM05D006369 ORTHO05D007764 1.3e-09 67.8 141 37.6
BolC3t13440H Brassica oleracea HOM05D006369 ORTHO05D007764 6.6e-09 65.5 109 43.1
PGSC0003DMG402008641 Solanum tuberosum HOM05D006369 ORTHO05D007764 2.3e-06 57.0 44 52.3
Sabra19G0056300 Salix brachista HOM05D006369 ORTHO05D007764 6.8e-06 55.5 88 37.5


User provided reference genes

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