Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G3219 Salvia bowleyana HOM05D006101 ORTHO05D007422 2.6e-256 888.3 458 100.0
MSTRG.21091 Avicennia marina HOM05D006101 ORTHO05D007422 1.3e-167 593.6 458 66.4
Migut.D02287 Erythranthe guttata HOM05D006101 ORTHO05D007422 4.2e-166 588.6 464 65.7
SGA_v2.0_scaffold27G11561 Striga asiatica HOM05D006101 ORTHO05D007422 1.2e-160 570.5 461 63.1
Oeu007313.2 Olea europaea HOM05D006101 ORTHO05D007422 3.6e-141 505.8 491 56.0
CSS0020443 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 8.6e-127 458.0 463 54.0
Dinv16214 Davidia involucrata HOM05D006101 ORTHO05D007422 1.5e-126 457.2 457 54.7
TAR636G3121 Trochodendron aralioides HOM05D006101 ORTHO05D007422 6.8e-124 448.4 466 52.6
Solyc11g066340.2 Solanum lycopersicum HOM05D006101 ORTHO05D007422 8.3e-122 441.4 461 50.5
Cc01_g10370 Coffea canephora HOM05D006101 ORTHO05D007422 1.9e-121 440.3 466 50.6
CAN.G546.34 Capsicum annuum HOM05D006101 ORTHO05D007422 3.2e-121 439.5 457 51.2
Sopen11g026080 Solanum pennellii HOM05D006101 ORTHO05D007422 5.4e-121 438.7 461 50.1
PGSC0003DMG400000413 Solanum tuberosum HOM05D006101 ORTHO05D007422 4.6e-120 435.6 456 51.5
GSVIVG01031479001 Vitis vinifera HOM05D006101 ORTHO05D007422 1.7e-119 433.7 460 50.4
Nitab4.5_0000329g0130 Nicotiana tabacum HOM05D006101 ORTHO05D007422 3.0e-119 433.0 448 49.8
CSS0026133 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 1.1e-118 431.0 416 55.0
Peaxi162Scf00086g01114 Petunia axillaris HOM05D006101 ORTHO05D007422 3.3e-118 429.5 437 51.3
QL01p015279 Quercus lobata HOM05D006101 ORTHO05D007422 9.5e-118 427.9 461 50.8
Cfa010291 Carpinus fangiana HOM05D006101 ORTHO05D007422 4.4e-115 419.1 461 50.3
Lj2C1009G5 Lonicera japonica HOM05D006101 ORTHO05D007422 9.2e-113 411.4 485 47.8
Hma1.2p1_0051F.1_g029390 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 1.6e-112 410.6 435 51.5
Sed0008610 Sechium edule HOM05D006101 ORTHO05D007422 2.7e-112 409.8 453 47.9
Actinidia03696 Actinidia chinensis HOM05D006101 ORTHO05D007422 4.6e-112 409.1 462 51.3
Potri.009G006200 Populus trichocarpa HOM05D006101 ORTHO05D007422 6.0e-112 408.7 456 48.5
Haze_23705 Corylus avellana HOM05D006101 ORTHO05D007422 7.8e-112 408.3 449 50.6
CiPaw.13G123600 Carya illinoinensis HOM05D006101 ORTHO05D007422 1.0e-111 407.9 453 49.2
Lsat_1_v5_gn_6_44300 Lactuca sativa HOM05D006101 ORTHO05D007422 1.3e-111 407.5 458 48.3
Manes.04G013700 Manihot esculenta HOM05D006101 ORTHO05D007422 1.3e-111 407.5 461 49.0
CsaV3_1G013150 Cucumis sativus L. HOM05D006101 ORTHO05D007422 5.1e-111 405.6 453 47.5
Atru.chr3.3528 Acer truncatum HOM05D006101 ORTHO05D007422 9.5e-110 401.4 451 49.0
THA.LOC104800579 Tarenaya hassleriana HOM05D006101 ORTHO05D007422 9.5e-110 401.4 458 47.2
ClCG03G002470 Citrullus lanatus HOM05D006101 ORTHO05D007422 6.2e-109 398.7 453 46.6
Carub.0004s0893 Capsella rubella HOM05D006101 ORTHO05D007422 6.8e-108 395.2 456 46.1
Aqoxy1G01111 Aquilegia oxysepala HOM05D006101 ORTHO05D007422 8.9e-108 394.8 461 46.9
TWI75G1238 Tripterygium wilfordii HOM05D006101 ORTHO05D007422 1.5e-107 394.0 454 47.4
COL.COLO4_11107 Corchorus olitorius HOM05D006101 ORTHO05D007422 2.0e-107 393.7 460 48.0
Thecc.09G350300 Theobroma cacao HOM05D006101 ORTHO05D007422 3.4e-107 392.9 462 46.5
MD11G1147300 Malus domestica HOM05D006101 ORTHO05D007422 5.8e-107 392.1 452 47.8
unitig_747.g21973 Utricularia gibba HOM05D006101 ORTHO05D007422 9.9e-107 391.3 368 53.8
Duzib150G0708 Durio zibethinus HOM05D006101 ORTHO05D007422 1.3e-106 391.0 460 46.5
AT2G28130 Arabidopsis thaliana HOM05D006101 ORTHO05D007422 4.9e-106 389.0 460 45.2
Gohir.D03G139000 Gossypium hirsutum HOM05D006101 ORTHO05D007422 6.4e-106 388.7 464 45.9
Aa31LG5G8010 Aethionema arabicum HOM05D006101 ORTHO05D007422 1.4e-105 387.5 453 45.0
Gohir.A03G029500 Gossypium hirsutum HOM05D006101 ORTHO05D007422 4.1e-105 386.0 464 45.5
Prupe.6G111800 Prunus persica HOM05D006101 ORTHO05D007422 4.1e-105 386.0 461 46.6
Medtr4g057493 Medicago truncatula HOM05D006101 ORTHO05D007422 3.5e-104 382.9 457 46.0
Gorai.003G145800 Gossypium raimondii HOM05D006101 ORTHO05D007422 6.0e-104 382.1 464 45.7
Ca_02469_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 1.0e-103 381.3 449 47.0
RcHm_v2.0_Chr5g0056961 Rosa chinensis HOM05D006101 ORTHO05D007422 1.0e-103 381.3 462 47.2
HanXRQChr13g0396251 Helianthus annuus HOM05D006101 ORTHO05D007422 6.6e-103 378.6 458 46.9
Ca_30122_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 1.9e-102 377.1 456 46.5
Phvul.011G085500 Phaseolus vulgaris HOM05D006101 ORTHO05D007422 5.6e-102 375.6 459 45.1
Rhsim01G0211100 Rhododendron simsii HOM05D006101 ORTHO05D007422 5.6e-102 375.6 457 48.4
PGR102G2892 Punica granatum HOM05D006101 ORTHO05D007422 2.1e-101 373.6 454 45.2
Lalb_Chr19g0136961 Lupinus albus HOM05D006101 ORTHO05D007422 2.8e-101 373.2 458 46.9
Glyma.11G193400 Glycine max HOM05D006101 ORTHO05D007422 4.7e-101 372.5 460 45.9
VMungo1127G1509 Vigna mungo HOM05D006101 ORTHO05D007422 4.7e-101 372.5 462 45.0
BcaB02g10150 Brassica carinata HOM05D006101 ORTHO05D007422 6.2e-101 372.1 451 43.5
Sp4g10940 Schrenkiella parvula HOM05D006101 ORTHO05D007422 6.2e-101 372.1 455 43.7
Psat0s1387g0080 Pisum sativum HOM05D006101 ORTHO05D007422 8.1e-101 371.7 455 45.7
PSO339G3309 Papaver somniferum HOM05D006101 ORTHO05D007422 1.4e-100 370.9 467 45.4
Eucgr.B03934 Eucalyptus grandis HOM05D006101 ORTHO05D007422 3.1e-100 369.8 457 46.4
PSO063G0796 Papaver somniferum HOM05D006101 ORTHO05D007422 3.1e-100 369.8 467 45.0
AL4G22020 Arabidopsis lyrata HOM05D006101 ORTHO05D007422 5.2e-100 369.0 460 43.5
FAN21G1086 Fragaria x ananassa HOM05D006101 ORTHO05D007422 5.2e-100 369.0 454 45.6
FAN11G1700 Fragaria x ananassa HOM05D002446 ORTHO05D007422 2.6e-99 366.7 458 45.4
FAN16G0923 Fragaria x ananassa HOM05D006101 ORTHO05D007422 5.8e-99 365.5 452 45.4
Lj3g0002990 Lotus japonicus HOM05D006101 ORTHO05D007422 7.6e-99 365.2 457 45.7
FvH4_3g30770 Fragaria vesca HOM05D006101 ORTHO05D007422 2.9e-98 363.2 461 45.1
C04p23380 Brassica napus HOM05D006101 ORTHO05D007422 4.9e-98 362.5 446 43.7
FAN25G1259 Fragaria x ananassa HOM05D006101 ORTHO05D007422 4.9e-98 362.5 451 45.2
Ciclev10028403m.g Citrus clementina HOM05D006101 ORTHO05D007422 8.4e-98 361.7 461 44.7
Sc06g0010850 Simmondsia chinensis HOM05D006101 ORTHO05D007422 1.1e-97 361.3 459 44.7
BcaC02g10947 Brassica carinata HOM05D006101 ORTHO05D007422 9.3e-97 358.2 453 43.3
BolC4t23840H Brassica oleracea HOM05D006101 ORTHO05D007422 9.3e-97 358.2 446 43.5
MELO3C004994.2 Cucumis melo HOM05D006101 ORTHO05D007422 2.7e-96 356.7 497 41.6
BraA07t29579Z Brassica rapa HOM05D006101 ORTHO05D007422 1.0e-95 354.8 450 43.1
vmacro14396 Vaccinium macrocarpon HOM05D006101 ORTHO05D007422 3.0e-95 353.2 448 45.5
CARHR120970 Cardamine hirsuta HOM05D006101 ORTHO05D007422 8.7e-95 351.7 459 42.3
CANSAT56G2622 Cannabis sativa HOM05D006101 ORTHO05D007422 7.3e-94 348.6 435 45.5
ECA233G2185 Erigeron canadensis HOM05D006101 ORTHO05D007422 3.6e-93 346.3 460 42.8
EL10Ac9g22610 Beta vulgaris HOM05D006101 ORTHO05D007422 4.8e-93 345.9 468 41.2
Sabra09G0003500 Salix brachista HOM05D006101 ORTHO05D007422 5.3e-92 342.4 378 47.9
A07p18660 Brassica napus HOM05D006101 ORTHO05D007422 3.4e-91 339.7 464 40.9
Nn2g13844 Nelumbo nucifera HOM05D006101 ORTHO05D007422 1.9e-89 334.0 398 44.7
Thhalv10016576m.g Eutrema salsugineum HOM05D006101 ORTHO05D007422 2.1e-88 330.5 468 40.8
AUR62029180 Chenopodium quinoa HOM05D006101 ORTHO05D007422 3.0e-87 326.6 447 41.8
ATR0088G017 Amborella trichopoda HOM05D006101 ORTHO05D007422 1.5e-86 324.3 435 42.3
CDE09G0605 Ceratophyllum demersum HOM05D006101 ORTHO05D007422 3.3e-86 323.2 448 41.7
DCAR_018770 Daucus carota HOM05D006101 ORTHO05D007422 2.8e-85 320.1 361 47.4
Os01g0241100 Oryza sativa ssp. japonica HOM05D006101 ORTHO05D007422 6.9e-84 315.5 460 42.0
Nitab4.5_0003880g0040 Nicotiana tabacum HOM05D006101 ORTHO05D007422 2.7e-80 303.5 459 39.0
Dinv29372 Davidia involucrata HOM05D006101 ORTHO05D007422 7.9e-80 302.0 327 50.2
MBI13_g39328_MAGBIO Magnolia biondii HOM05D006101 ORTHO05D007422 2.5e-78 297.0 558 35.7
HPP92_020176 Vanilla planifolia HOM05D006101 ORTHO05D007422 7.6e-75 285.4 458 36.5
Zm00001eb118850 Zea mays HOM05D006101 ORTHO05D007422 4.5e-67 259.6 330 44.5
Ah.01g014140 Amaranthus hybridus HOM05D006101 ORTHO05D007422 1.3e-66 258.1 481 35.1
Glyma.12G080600 Glycine max HOM05D006101 ORTHO05D007422 5.1e-63 246.1 368 40.2
arahy.Tifrunner.gnm1.ann1.P58SHS Arachis hypogaea HOM05D006101 ORTHO05D007422 2.8e-61 240.4 476 35.5
arahy.Tifrunner.gnm1.ann1.66BK9V Arachis hypogaea HOM05D006101 ORTHO05D007422 1.4e-60 238.0 447 36.2
Hund08365 Selenicereus undatus HOM05D006101 ORTHO05D007422 1.8e-60 237.7 458 34.9
arahy.Tifrunner.gnm1.ann1.V5BWPF Arachis hypogaea HOM05D006101 ORTHO05D007422 1.1e-57 228.4 465 34.4
Hma1.2p1_0051F.1_g029400 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 3.2e-57 226.9 214 56.5
AUR62014957 Chenopodium quinoa HOM05D006101 ORTHO05D007422 5.5e-57 226.1 376 35.9
HanXRQChr04g0111151 Helianthus annuus HOM05D006101 ORTHO05D007422 1.1e-52 211.8 300 42.3
SHI06228 Sapria himalayana HOM05D006101 ORTHO05D007422 3.3e-38 163.7 192 45.3
VMungo1215G2511 Vigna mungo HOM05D006101 ORTHO05D007422 5.7e-38 162.9 318 33.6
Pp3c4_7040 Physcomitrium patens HOM05D006101 ORTHO05D007422 1.4e-31 141.7 437 27.5
Mapoly0094s0062 Marchantia polymorpha HOM05D006101 ORTHO05D007422 6.3e-29 132.9 327 26.3
arahy.Tifrunner.gnm1.ann1.KM9ELV Arachis hypogaea HOM05D006101 ORTHO05D007422 1.9e-25 121.3 274 33.2
Actinidia20431 Actinidia chinensis HOM05D006101 ORTHO05D007422 1.3e-21 108.6 127 48.8
SEGI_30921 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 4.1e-20 103.6 220 29.5
SEGI_35146 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 3.5e-19 100.5 135 43.0
arahy.Tifrunner.gnm1.ann1.PH2QKZ Arachis hypogaea HOM05D006101 ORTHO05D007422 1.7e-18 98.2 233 31.8
SMO351G0356 Selaginella moellendorffii HOM05D006101 ORTHO05D007422 2.3e-18 97.8 318 26.4
AagrBONN_evm.TU.Sc2ySwM_228.2481 Anthoceros agrestis HOM05D006101 ORTHO05D007422 5.6e-17 93.2 418 24.9
TPR.G36765 Trifolium pratense HOM05D006101 ORTHO05D007422 1.0e-15 89.0 88 50.0
arahy.Tifrunner.gnm1.ann1.EU9JMW Arachis hypogaea HOM05D006101 ORTHO05D007422 8.9e-15 85.9 172 33.7
arahy.Tifrunner.gnm1.ann1.88XJ4T Arachis hypogaea HOM05D006101 ORTHO05D007422 1.2e-14 85.5 113 42.5
SHI06230 Sapria himalayana HOM05D006101 ORTHO05D007422 4.3e-09 67.0 133 33.1


User provided reference genes

Program Settings