Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G3148 Salvia bowleyana HOM05D007649 ORTHO05D009668 1.0e-46 189.9 105 100.0
Migut.N01074 Erythranthe guttata HOM05D007649 ORTHO05D009668 1.6e-23 112.8 92 64.1
GSVIVG01035747001 Vitis vinifera HOM05D007649 ORTHO05D009668 3.2e-21 105.1 102 53.9
Nn2g11782 Nelumbo nucifera HOM05D007649 ORTHO05D009668 6.8e-19 97.4 87 58.6
QL12p031020 Quercus lobata HOM05D007649 ORTHO05D009668 1.2e-18 96.7 95 57.9
Gohir.D07G028200 Gossypium hirsutum HOM05D007649 ORTHO05D009668 2.0e-18 95.9 98 56.1
Gorai.001G029500 Gossypium raimondii HOM05D007649 ORTHO05D009668 2.0e-18 95.9 98 56.1
Cpa.g.sc205.32 Carica papaya HOM05D007649 ORTHO05D009668 2.6e-18 95.5 92 55.4
CiPaw.08G016800 Carya illinoinensis HOM05D007649 ORTHO05D009668 5.7e-18 94.4 95 55.8
Dinv30235 Davidia involucrata HOM05D007649 ORTHO05D009668 1.3e-17 93.2 102 52.0
TAR383G0510 Trochodendron aralioides HOM05D007649 ORTHO05D009668 1.7e-17 92.8 83 59.0
Duzib150G1676 Durio zibethinus HOM05D007649 ORTHO05D009668 2.2e-17 92.4 97 56.7
THA.LOC104799213 Tarenaya hassleriana HOM05D007649 ORTHO05D009668 6.3e-17 90.9 77 59.7
Haze_21646 Corylus avellana HOM05D007649 ORTHO05D009668 8.3e-17 90.5 95 55.8
ECA233G5733 Erigeron canadensis HOM05D007649 ORTHO05D009668 8.3e-17 90.5 85 56.5
A06p36270 Brassica napus HOM05D007649 ORTHO05D009668 1.4e-16 89.7 94 51.1
BraA06t26549Z Brassica rapa HOM05D007649 ORTHO05D009668 1.4e-16 89.7 94 51.1
Prupe.1G464700 Prunus persica HOM05D007649 ORTHO05D009668 1.8e-16 89.4 78 57.7
Nitab4.5_0012591g0010 Nicotiana tabacum HOM05D007649 ORTHO05D009668 4.1e-16 88.2 79 55.7
TPR.G12493 Trifolium pratense HOM05D007649 ORTHO05D009668 4.1e-16 88.2 86 55.8
HanXRQChr10g0313021 Helianthus annuus HOM05D007649 ORTHO05D009668 5.4e-16 87.8 85 55.3
Atru.chr7.2308 Acer truncatum HOM05D007649 ORTHO05D009668 9.1e-16 87.0 77 57.1
Peaxi162Scf00105g01010 Petunia axillaris HOM05D007649 ORTHO05D009668 9.1e-16 87.0 79 54.4
Sp2g21960 Schrenkiella parvula HOM05D007649 ORTHO05D009668 9.1e-16 87.0 97 48.5
CAN.G1384.1 Capsicum annuum HOM05D007649 ORTHO05D009668 1.2e-15 86.7 79 53.2
Duzib168G0100 Durio zibethinus HOM05D007649 ORTHO05D009668 1.6e-15 86.3 97 54.6
Thhalv10005188m.g Eutrema salsugineum HOM05D007649 ORTHO05D009668 1.6e-15 86.3 97 47.4
Manes.16G069200 Manihot esculenta HOM05D007649 ORTHO05D009668 1.6e-15 86.3 94 52.1
TWI63G0355 Tripterygium wilfordii HOM05D007649 ORTHO05D009668 1.6e-15 86.3 80 53.8
CARHR187800 Cardamine hirsuta HOM05D007649 ORTHO05D009668 2.0e-15 85.9 96 47.9
PGR044G0128 Punica granatum HOM05D007649 ORTHO05D009668 2.0e-15 85.9 95 50.5
CANSAT25G0191 Cannabis sativa HOM05D007649 ORTHO05D009668 2.7e-15 85.5 77 59.7
FvH4_7g03290 Fragaria vesca HOM05D007649 ORTHO05D009668 2.7e-15 85.5 97 49.5
Psat5g025760 Pisum sativum HOM05D007649 ORTHO05D009668 2.7e-15 85.5 87 55.2
AL6G37400 Arabidopsis lyrata HOM05D007649 ORTHO05D009668 4.5e-15 84.7 98 51.0
Lsat_1_v5_gn_6_8481 Lactuca sativa HOM05D007649 ORTHO05D009668 4.5e-15 84.7 90 51.1
C02p59430 Brassica napus HOM05D007649 ORTHO05D009668 1.3e-14 83.2 94 47.9
Carub.0006s2344 Capsella rubella HOM05D007649 ORTHO05D009668 1.3e-14 83.2 95 49.5
Medtr3g108310 Medicago truncatula HOM05D007649 ORTHO05D009668 1.3e-14 83.2 88 53.4
Nitab4.5_0000250g0070 Nicotiana tabacum HOM05D007649 ORTHO05D009668 1.3e-14 83.2 79 50.6
AT5G25570 Arabidopsis thaliana HOM05D007649 ORTHO05D009668 1.7e-14 82.8 98 50.0
arahy.Tifrunner.gnm1.ann1.0NF80D Arachis hypogaea HOM05D007649 ORTHO05D009668 1.7e-14 82.8 84 58.3
arahy.Tifrunner.gnm1.ann1.3N1A5Y Arachis hypogaea HOM05D007649 ORTHO05D009668 1.7e-14 82.8 84 58.3
MELO3C003657.2 Cucumis melo HOM05D007649 ORTHO05D009668 3.8e-14 81.6 78 53.8
Lj1g0000027 Lotus japonicus HOM05D007649 ORTHO05D009668 5.0e-14 81.3 82 54.9
Sopen08g021900 Solanum pennellii HOM05D007649 ORTHO05D009668 5.0e-14 81.3 75 52.0
Actinidia13297 Actinidia chinensis HOM05D007649 ORTHO05D009668 8.5e-14 80.5 95 49.5
CsaV3_3G046810 Cucumis sativus L. HOM05D007649 ORTHO05D009668 8.5e-14 80.5 77 53.2
Glyma.04G073400 Glycine max HOM05D007649 ORTHO05D009668 8.5e-14 80.5 86 51.2
Glyma.06G074500 Glycine max HOM05D007649 ORTHO05D009668 8.5e-14 80.5 80 55.0
Aqoxy7G01751 Aquilegia oxysepala HOM05D007649 ORTHO05D009668 1.5e-13 79.7 85 50.6
ClCG05G017300 Citrullus lanatus HOM05D007649 ORTHO05D009668 1.5e-13 79.7 77 53.2
MD08G1134800 Malus domestica HOM05D007649 ORTHO05D009668 1.5e-13 79.7 74 55.4
Aa31LG11G4690 Aethionema arabicum HOM05D007649 ORTHO05D009668 1.9e-13 79.3 94 48.9
EL10Ac2g02528 Beta vulgaris HOM05D007649 ORTHO05D009668 2.5e-13 79.0 76 52.6
Cc08_g08160 Coffea canephora HOM05D007649 ORTHO05D009668 4.2e-13 78.2 84 47.6
Ciclev10010030m.g Citrus clementina HOM05D007649 ORTHO05D009668 7.2e-13 77.4 96 51.0
Phvul.009G099200 Phaseolus vulgaris HOM05D007649 ORTHO05D009668 7.2e-13 77.4 81 54.3
RcHm_v2.0_Chr1g0325561 Rosa chinensis HOM05D007649 ORTHO05D009668 9.5e-13 77.0 99 45.5
PSO063G4106 Papaver somniferum HOM05D007649 ORTHO05D009668 1.2e-12 76.6 100 48.0
Hund02998 Selenicereus undatus HOM05D007649 ORTHO05D009668 1.2e-12 76.6 91 45.1
Potri.006G245100 Populus trichocarpa HOM05D007649 ORTHO05D009668 2.7e-12 75.5 74 55.4
Potri.012G125000 Populus trichocarpa HOM05D007649 ORTHO05D009668 3.6e-12 75.1 74 55.4
AUR62032390 Chenopodium quinoa HOM05D007649 ORTHO05D009668 6.1e-12 74.3 79 45.6
AUR62024825 Chenopodium quinoa HOM05D007649 ORTHO05D009668 1.4e-11 73.2 77 45.5
Oeu033993.1 Olea europaea HOM05D007649 ORTHO05D009668 1.8e-11 72.8 64 59.4
Oeu033995.1 Olea europaea HOM05D007649 ORTHO05D009668 1.8e-11 72.8 64 59.4
Rhsim07G0149600 Rhododendron simsii HOM05D007649 ORTHO05D009668 1.8e-11 72.8 84 45.2
BolC7t44754H Brassica oleracea HOM05D007649 ORTHO05D009668 3.0e-11 72.0 66 51.5
BolC2t12006H Brassica oleracea HOM05D007649 ORTHO05D009668 4.0e-11 71.6 66 51.5
Sed0003009 Sechium edule HOM05D007649 ORTHO05D009668 4.0e-11 71.6 74 52.7
FAN10G0583 Fragaria x ananassa HOM05D007649 ORTHO05D009668 5.2e-11 71.2 124 38.7
Sc09g0008910 Simmondsia chinensis HOM05D007649 ORTHO05D009668 5.2e-11 71.2 100 40.0
Eucgr.C02878 Eucalyptus grandis HOM05D007649 ORTHO05D009668 1.2e-10 70.1 64 56.2
Sed0022915 Sechium edule HOM05D007649 ORTHO05D009668 1.2e-10 70.1 72 50.0
CDE05G1266 Ceratophyllum demersum HOM05D007649 ORTHO05D009668 2.0e-10 69.3 82 48.8
MBI04_g10458_MAGBIO Magnolia biondii HOM05D007649 ORTHO05D009668 2.6e-10 68.9 69 52.2
Ah.12g060320 Amaranthus hybridus HOM05D007649 ORTHO05D009668 4.4e-10 68.2 81 44.4
Solyc08g067980.3 Solanum lycopersicum HOM05D007649 ORTHO05D009668 9.8e-10 67.0 86 43.0
CSS0042406 Camellia sinensis var. sinensis HOM05D007649 ORTHO05D009668 1.3e-09 66.6 86 46.5
TWI34G1739 Tripterygium wilfordii HOM05D007649 ORTHO05D009668 1.3e-09 66.6 75 54.7
PGSC0003DMG400014488 Solanum tuberosum HOM05D007649 ORTHO05D009668 1.1e-08 63.5 58 51.7
Sabra06G0191900 Salix brachista HOM05D007649 ORTHO05D009668 2.4e-08 62.4 64 51.6
Gohir.A07G024600 Gossypium hirsutum HOM05D007649 ORTHO05D009668 5.4e-08 61.2 85 45.9
ATR0037G059 Amborella trichopoda HOM05D007649 ORTHO05D009668 7.0e-08 60.8 76 44.7
vmacro05350 Vaccinium macrocarpon HOM05D007649 ORTHO05D009668 2.7e-07 58.9 52 53.8
FAN03G3370 Fragaria x ananassa HOM05D007649 ORTHO05D009668 5.9e-07 57.8 91 40.7
FAN06G3614 Fragaria x ananassa HOM05D007649 ORTHO05D009668 1.7e-06 56.2 56 53.6


User provided reference genes

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