Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G3111 Salvia bowleyana HOM05D007808 ORTHO05D009895 1.9e-245 852.0 429 100.0
Migut.D00468 Erythranthe guttata HOM05D007808 ORTHO05D009895 4.1e-139 498.8 445 59.1
SGA_v2.0_scaffold1G00644 Striga asiatica HOM05D007808 ORTHO05D009895 1.2e-114 417.5 413 54.5
Lj2C1144T6 Lonicera japonica HOM05D007808 ORTHO05D009895 1.5e-109 400.6 439 47.4
Actinidia37545 Actinidia chinensis HOM05D007808 ORTHO05D009895 7.6e-109 398.3 436 50.5
Oeu039657.1 Olea europaea HOM05D007808 ORTHO05D009895 1.4e-102 377.5 471 45.0
GSVIVG01028406001 Vitis vinifera HOM05D007808 ORTHO05D009895 1.8e-102 377.1 434 46.1
Hma1.2p1_0273F.1_g109280 Hydrangea macrophylla HOM05D007808 ORTHO05D009895 6.9e-102 375.2 446 46.4
Thecc.01G251900 Theobroma cacao HOM05D007808 ORTHO05D009895 2.6e-101 373.2 439 46.7
Duzib138G1393 Durio zibethinus HOM05D007808 ORTHO05D009895 2.9e-100 369.8 449 45.2
Manes.13G040600 Manihot esculenta HOM05D007808 ORTHO05D009895 4.9e-100 369.0 440 44.8
QL09p041160 Quercus lobata HOM05D007808 ORTHO05D009895 7.1e-99 365.2 441 44.2
Peaxi162Scf00415g00913 Petunia axillaris HOM05D007808 ORTHO05D009895 1.1e-96 357.8 437 44.9
Solyc09g072860.2 Solanum lycopersicum HOM05D007808 ORTHO05D009895 1.1e-96 357.8 440 44.3
Potri.014G192200 Populus trichocarpa HOM05D007808 ORTHO05D009895 2.5e-96 356.7 446 43.7
Sopen09g028660 Solanum pennellii HOM05D007808 ORTHO05D009895 3.3e-96 356.3 442 45.0
Gohir.A07G151000 Gossypium hirsutum HOM05D007808 ORTHO05D009895 1.6e-95 354.0 437 43.5
Gohir.D07G157600 Gossypium hirsutum HOM05D007808 ORTHO05D009895 3.6e-95 352.8 437 43.2
Nn1g02938 Nelumbo nucifera HOM05D007808 ORTHO05D009895 4.8e-95 352.4 475 42.3
Atru.chr5.1818 Acer truncatum HOM05D007808 ORTHO05D009895 5.3e-94 349.0 446 43.9
DCAR_018515 Daucus carota HOM05D007808 ORTHO05D009895 2.0e-93 347.1 440 45.0
Aqoxy5G00155 Aquilegia oxysepala HOM05D007808 ORTHO05D009895 5.8e-93 345.5 431 43.4
TWI18G1304 Tripterygium wilfordii HOM05D007808 ORTHO05D009895 1.3e-92 344.4 457 43.1
COL.COLO4_10584 Corchorus olitorius HOM05D007808 ORTHO05D009895 1.7e-92 344.0 457 42.7
Ciclev10020041m.g Citrus clementina HOM05D007808 ORTHO05D009895 3.8e-92 342.8 446 43.3
PSO832G1361 Papaver somniferum HOM05D007808 ORTHO05D009895 8.4e-92 341.7 437 43.0
RcHm_v2.0_Chr6g0286881 Rosa chinensis HOM05D007808 ORTHO05D009895 8.4e-92 341.7 437 42.8
FAN20G2653 Fragaria x ananassa HOM05D007808 ORTHO05D009895 1.1e-91 341.3 438 41.6
TAR633G0330 Trochodendron aralioides HOM05D007808 ORTHO05D009895 1.4e-91 340.9 476 42.4
CANSAT01G0990 Cannabis sativa HOM05D007808 ORTHO05D009895 1.9e-91 340.5 442 43.4
FAN27G2486 Fragaria x ananassa HOM05D007808 ORTHO05D009895 2.7e-90 336.7 439 41.5
FvH4_2g20710 Fragaria vesca HOM05D007808 ORTHO05D009895 1.8e-89 334.0 436 41.7
PGR031G1809 Punica granatum HOM05D007808 ORTHO05D009895 2.3e-89 333.6 432 40.7
Nitab4.5_0010039g0030 Nicotiana tabacum HOM05D007808 ORTHO05D009895 1.9e-88 330.5 441 42.0
HanXRQChr04g0111341 Helianthus annuus HOM05D007808 ORTHO05D009895 7.4e-88 328.6 436 42.7
Cc01_g17900 Coffea canephora HOM05D007808 ORTHO05D009895 3.7e-87 326.2 427 43.6
MBI10_g30718_MAGBIO Magnolia biondii HOM05D007808 ORTHO05D009895 1.8e-86 323.9 458 41.0
Nitab4.5_0000845g0040 Nicotiana tabacum HOM05D007808 ORTHO05D009895 1.8e-86 323.9 443 41.8
Prupe.8G216500 Prunus persica HOM05D007808 ORTHO05D009895 9.0e-86 321.6 431 41.5
FAN15G3261 Fragaria x ananassa HOM05D007808 ORTHO05D009895 4.5e-85 319.3 424 41.7
Gorai.001G180500 Gossypium raimondii HOM05D007808 ORTHO05D009895 1.7e-84 317.4 398 43.2
CSS0017675 Camellia sinensis var. sinensis HOM05D007808 ORTHO05D009895 2.1e-82 310.5 353 49.3
CSS0046569 Camellia sinensis var. sinensis HOM05D007808 ORTHO05D009895 2.1e-82 310.5 353 49.3
FAN24G0750 Fragaria x ananassa HOM05D007808 ORTHO05D009895 1.3e-81 307.8 417 41.5
AL8G16070 Arabidopsis lyrata HOM05D007808 ORTHO05D009895 2.5e-75 287.0 429 38.0
AT5G44010 Arabidopsis thaliana HOM05D007808 ORTHO05D009895 2.3e-73 280.4 429 37.8
BcaB07g30982 Brassica carinata HOM05D007808 ORTHO05D009895 3.9e-73 279.6 429 37.8
Carub.0008s0453 Capsella rubella HOM05D007808 ORTHO05D009895 6.7e-73 278.9 436 36.9
THA.LOC104801132 Tarenaya hassleriana HOM05D007808 ORTHO05D009895 2.5e-72 276.9 428 38.8
ATR0736G152 Amborella trichopoda HOM05D007808 ORTHO05D009895 1.6e-71 274.2 455 37.1
A09p20750 Brassica napus HOM05D007808 ORTHO05D009895 4.1e-70 269.6 427 36.3
BraA09t37679Z Brassica rapa HOM05D007808 ORTHO05D009895 5.3e-70 269.2 427 36.3
CARHR179280 Cardamine hirsuta HOM05D007808 ORTHO05D009895 2.0e-69 267.3 393 37.9
Sc05g0003060 Simmondsia chinensis HOM05D007808 ORTHO05D009895 2.6e-69 266.9 384 40.9
BcaC04g21876 Brassica carinata HOM05D007808 ORTHO05D009895 6.5e-68 262.3 427 35.6
C09p26260 Brassica napus HOM05D007808 ORTHO05D009895 6.5e-68 262.3 427 35.6
PSO764G0215 Papaver somniferum HOM05D007808 ORTHO05D009895 7.2e-67 258.8 429 36.6
Lsat_1_v5_gn_8_92100 Lactuca sativa HOM05D007808 ORTHO05D009895 2.0e-64 250.8 405 37.8
HPP92_025831 Vanilla planifolia HOM05D007808 ORTHO05D009895 1.3e-63 248.1 447 33.8
Zm00001eb191560 Zea mays HOM05D007808 ORTHO05D009895 1.0e-60 238.4 440 34.3
Os02g0814600 Oryza sativa ssp. japonica HOM05D007808 ORTHO05D009895 2.2e-60 237.3 438 33.6
Sabra14G0143900 Salix brachista HOM05D007808 ORTHO05D009895 2.5e-59 233.8 320 40.6
BolC9t55528H Brassica oleracea HOM05D007808 ORTHO05D009895 1.2e-58 231.5 390 34.4
CAN.G1395.2 Capsicum annuum HOM05D007808 ORTHO05D009895 4.7e-58 229.6 301 43.2
Eucgr.A01321 Eucalyptus grandis HOM05D007808 ORTHO05D009895 1.4e-57 228.0 352 38.6
Thhalv10003421m.g Eutrema salsugineum HOM05D007808 ORTHO05D009895 5.0e-52 209.5 429 32.9
Cpa.g.sc87.15 Carica papaya HOM05D007808 ORTHO05D009895 3.3e-48 196.8 226 46.5
BcaC04g21877 Brassica carinata HOM05D007808 ORTHO05D009895 2.4e-46 190.7 365 33.2
CiPaw.04G189500 Carya illinoinensis HOM05D007808 ORTHO05D009895 5.0e-44 183.0 184 48.4
Haze_24684 Corylus avellana HOM05D007808 ORTHO05D009895 1.9e-43 181.0 225 41.3
CDE02G3651 Ceratophyllum demersum HOM05D007808 ORTHO05D009895 3.4e-40 170.2 290 36.6
Gorai.002G091900 Gossypium raimondii HOM05D007808 ORTHO05D009895 1.0e-33 148.7 211 38.9
ECA236G2323 Erigeron canadensis HOM05D000728 ORTHO05D001586 4.4e-32 143.3 229 37.6
CiPaw.04G189400 Carya illinoinensis HOM05D007808 ORTHO05D009895 8.3e-23 112.5 90 55.6
SEGI_27571 Sequoiadendron giganteum HOM05D007808 ORTHO05D009895 4.3e-19 100.1 230 33.5
AagrBONN_evm.TU.Sc2ySwM_117.2846 Anthoceros agrestis HOM05D007808 ORTHO05D009895 8.9e-17 92.4 423 22.2
PGSC0003DMG400003825 Solanum tuberosum HOM05D007808 ORTHO05D009895 1.2e-16 92.0 56 67.9
Sp2g08850 Schrenkiella parvula HOM05D007808 ORTHO05D009895 4.9e-15 86.7 338 23.1
Pp3c1_42330 Physcomitrium patens HOM05D007808 ORTHO05D009895 9.2e-14 82.4 418 22.7
FAN27G0174 Fragaria x ananassa HOM05D007808 ORTHO05D009895 2.7e-13 80.9 54 57.4
Gohir.D11G218200 Gossypium hirsutum HOM05D007808 ORTHO05D009895 1.2e-10 72.0 160 28.8
CANSAT56G3388 Cannabis sativa HOM05D007808 ORTHO05D009895 2.2e-07 61.2 41 63.4


User provided reference genes

Program Settings