Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G3036 Salvia bowleyana HOM05D002916 ORTHO05D003152 5.7e-130 467.6 239 100.0
Oeu056929.1 Olea europaea HOM05D002916 ORTHO05D003152 4.9e-25 119.0 100 65.0
Oeu047865.1 Olea europaea HOM05D002916 ORTHO05D003152 1.4e-24 117.5 101 63.4
RcHm_v2.0_Chr3g0473821 Rosa chinensis HOM05D002916 ORTHO05D003152 7.1e-24 115.2 102 60.8
Dinv31688 Davidia involucrata HOM05D004140 ORTHO05D006116 1.6e-23 114.0 104 59.6
Prupe.7G109500 Prunus persica HOM05D002916 ORTHO05D003152 2.1e-23 113.6 102 58.8
Rhsim03G0074900 Rhododendron simsii HOM05D002916 ORTHO05D003152 4.6e-23 112.5 104 58.7
Atru.chr8.1530 Acer truncatum HOM05D002916 ORTHO05D003152 1.0e-22 111.3 104 60.6
COL.COLO4_29727 Corchorus olitorius HOM05D002916 ORTHO05D003152 2.3e-22 110.2 102 56.9
Atru.chr8.1528 Acer truncatum HOM05D002916 ORTHO05D003152 3.9e-22 109.4 105 59.0
Migut.L01781 Erythranthe guttata HOM05D002916 ORTHO05D003152 3.9e-22 109.4 111 60.4
FAN05G3486 Fragaria x ananassa HOM05D002916 ORTHO05D003152 3.9e-22 109.4 102 58.8
FAN05G4254 Fragaria x ananassa HOM05D002916 ORTHO05D003152 3.9e-22 109.4 102 58.8
Manes.09G055000 Manihot esculenta HOM05D002916 ORTHO05D003152 8.7e-22 108.2 102 62.7
Migut.J01032 Erythranthe guttata HOM05D002916 ORTHO05D003152 1.1e-21 107.8 121 55.4
FAN02G4366 Fragaria x ananassa HOM05D002916 ORTHO05D003152 1.5e-21 107.5 102 57.8
Peaxi162Scf00404g00102 Petunia axillaris HOM05D002916 ORTHO05D003152 2.5e-21 106.7 88 60.2
MD12G1036700 Malus domestica HOM05D002916 ORTHO05D003152 4.3e-21 105.9 104 58.7
Manes.08G025700 Manihot esculenta HOM05D002916 ORTHO05D003152 4.3e-21 105.9 101 59.4
MSTRG.26638 Avicennia marina HOM05D002916 ORTHO05D003152 5.6e-21 105.5 107 58.9
Nn6g34891 Nelumbo nucifera HOM05D002916 ORTHO05D003152 5.6e-21 105.5 102 56.9
Cpa.g.sc5.15 Carica papaya HOM05D002916 ORTHO05D003152 7.4e-21 105.1 101 58.4
FvH4_6g18810 Fragaria vesca HOM05D002916 ORTHO05D003152 2.1e-20 103.6 102 57.8
FAN14G1204 Fragaria x ananassa HOM05D002916 ORTHO05D003152 2.1e-20 103.6 102 57.8
Potri.006G213100 Populus trichocarpa HOM05D002916 ORTHO05D003152 2.1e-20 103.6 105 56.2
Ciclev10012941m.g Citrus clementina HOM05D002916 ORTHO05D003152 3.7e-20 102.8 102 52.0
SGA_v2.0_scaffold184G39965 Striga asiatica HOM05D002916 ORTHO05D003152 3.7e-20 102.8 102 56.9
Potri.016G079700 Populus trichocarpa HOM05D002916 ORTHO05D003152 6.2e-20 102.1 103 58.3
QL05p034193 Quercus lobata HOM05D002916 ORTHO05D003152 8.2e-20 101.7 102 58.8
SGA_v2.0_scaffold35G14068 Striga asiatica HOM05D002916 ORTHO05D003152 8.2e-20 101.7 133 49.6
TWI53G0172 Tripterygium wilfordii HOM05D002916 ORTHO05D003152 1.8e-19 100.5 104 57.7
Glyma.10G072400 Glycine max HOM05D002916 ORTHO05D003152 3.1e-19 99.8 105 52.4
Sabra06G0164100 Salix brachista HOM05D002916 ORTHO05D003152 3.1e-19 99.8 107 58.9
Thecc.05G089800 Theobroma cacao HOM05D002916 ORTHO05D003152 5.3e-19 99.0 102 54.9
Hma1.2p1_0084F.1_g043850 Hydrangea macrophylla HOM05D002916 ORTHO05D003152 6.9e-19 98.6 107 53.3
Hma1.2p1_0820F.1_g223855 Hydrangea macrophylla HOM05D002916 ORTHO05D003152 6.9e-19 98.6 107 53.3
Nn2g14164 Nelumbo nucifera HOM05D002916 ORTHO05D003152 9.0e-19 98.2 102 51.0
Actinidia31270 Actinidia chinensis HOM05D002916 ORTHO05D003152 1.5e-18 97.4 102 52.0
Lj1g0017693 Lotus japonicus HOM05D002916 ORTHO05D003152 4.5e-18 95.9 104 51.0
Haze_16636 Corylus avellana HOM05D002916 ORTHO05D003152 5.8e-18 95.5 107 56.1
Glyma.03G196300 Glycine max HOM05D002916 ORTHO05D003152 7.6e-18 95.1 103 52.4
Sabra16G0087700 Salix brachista HOM05D002916 ORTHO05D003152 7.6e-18 95.1 103 53.4
TWI74G0225 Tripterygium wilfordii HOM05D002916 ORTHO05D003152 1.0e-17 94.7 104 56.7
Haze_16634 Corylus avellana HOM05D002916 ORTHO05D003152 1.3e-17 94.4 107 55.1
Aqoxy4G02773 Aquilegia oxysepala HOM05D002916 ORTHO05D003152 1.7e-17 94.0 102 52.9
Lalb_Chr01g0018131 Lupinus albus HOM05D002916 ORTHO05D003152 1.7e-17 94.0 101 50.5
Duzib093G0112 Durio zibethinus HOM05D002916 ORTHO05D003152 2.2e-17 93.6 101 53.5
Duzib128G0442 Durio zibethinus HOM05D002916 ORTHO05D003152 2.9e-17 93.2 101 50.5
Sabra16G0085600 Salix brachista HOM05D002916 ORTHO05D003152 3.8e-17 92.8 103 52.4
Cfa001906 Carpinus fangiana HOM05D002916 ORTHO05D003152 4.9e-17 92.4 103 52.4
Ca_09009_v3 Cicer arietinum L. HOM05D002916 ORTHO05D003152 6.5e-17 92.0 102 51.0
Gohir.A09G139400 Gossypium hirsutum HOM05D002916 ORTHO05D003152 6.5e-17 92.0 93 51.6
Ciclev10013433m.g Citrus clementina HOM05D002916 ORTHO05D003152 8.4e-17 91.7 105 49.5
Gohir.A11G003500 Gossypium hirsutum HOM05D002916 ORTHO05D003152 8.4e-17 91.7 99 48.5
Nitab4.5_0001712g0010 Nicotiana tabacum HOM05D002916 ORTHO05D003152 1.1e-16 91.3 114 50.0
CiPaw.01G252200 Carya illinoinensis HOM05D002916 ORTHO05D003152 1.9e-16 90.5 103 51.5
Gohir.A05G000100 Gossypium hirsutum HOM05D002916 ORTHO05D003152 2.5e-16 90.1 99 47.5
Gohir.A07G134900 Gossypium hirsutum HOM05D002916 ORTHO05D003152 2.5e-16 90.1 99 48.5
AUR62006186 Chenopodium quinoa HOM05D002916 ORTHO05D003152 3.2e-16 89.7 102 49.0
Gohir.D09G135200 Gossypium hirsutum HOM05D002916 ORTHO05D003152 3.2e-16 89.7 99 48.5
Gorai.002G239800 Gossypium raimondii HOM05D002916 ORTHO05D003152 3.2e-16 89.7 102 46.1
Gorai.006G155100 Gossypium raimondii HOM05D002916 ORTHO05D003152 3.2e-16 89.7 99 48.5
AUR62028520 Chenopodium quinoa HOM05D002916 ORTHO05D003152 5.5e-16 89.0 100 49.0
Ah.15g090860 Amaranthus hybridus HOM05D002916 ORTHO05D003152 7.1e-16 88.6 98 46.9
Glyma.19G194943 Glycine max HOM05D002916 ORTHO05D003152 7.1e-16 88.6 103 50.5
Gohir.D04G099400 Gossypium hirsutum HOM05D002916 ORTHO05D003152 1.6e-15 87.4 104 47.1
Gorai.009G402300 Gossypium raimondii HOM05D002916 ORTHO05D003152 1.6e-15 87.4 104 47.1
Phvul.001G190500 Phaseolus vulgaris HOM05D002916 ORTHO05D003152 1.6e-15 87.4 101 48.5
Glyma.13G153800 Glycine max HOM05D002916 ORTHO05D003152 2.1e-15 87.0 104 50.0
Cc06_g05820 Coffea canephora HOM05D002916 ORTHO05D003152 2.7e-15 86.7 102 46.1
Gohir.A04G062400 Gossypium hirsutum HOM05D002916 ORTHO05D003152 2.7e-15 86.7 104 47.1
Gohir.A01G206200 Gossypium hirsutum HOM05D002916 ORTHO05D003152 3.5e-15 86.3 102 45.1
Gohir.D01G195600 Gossypium hirsutum HOM05D002916 ORTHO05D003152 4.6e-15 85.9 102 45.1
CsaV3_6G040690 Cucumis sativus L. HOM05D002916 ORTHO05D003152 2.3e-14 83.6 101 48.5
Dinv21202 Davidia involucrata HOM05D002916 ORTHO05D003152 5.1e-14 82.4 78 60.3
MELO3C024547.2 Cucumis melo HOM05D002916 ORTHO05D003152 6.7e-14 82.0 104 48.1
Sed0018474 Sechium edule HOM05D002916 ORTHO05D003152 8.7e-14 81.6 104 44.2
DCAR_007755 Daucus carota HOM05D002916 ORTHO05D003152 1.1e-13 81.3 102 50.0
VMungo1383G0514 Vigna mungo HOM05D002916 ORTHO05D003152 2.5e-13 80.1 106 46.2
MD14G1023400 Malus domestica HOM05D002916 ORTHO05D003152 3.3e-13 79.7 105 48.6
DCAR_009166 Daucus carota HOM05D002916 ORTHO05D003152 7.4e-13 78.6 103 44.7
Oeu061453.3 Olea europaea HOM05D005414 ORTHO05D006844 9.7e-13 78.2 75 60.0
Actinidia05426 Actinidia chinensis HOM05D002916 ORTHO05D003152 1.3e-12 77.8 101 44.6
Lsat_1_v5_gn_5_164861 Lactuca sativa HOM05D002916 ORTHO05D003152 8.2e-12 75.1 106 46.2
ClCG04G010060 Citrullus lanatus HOM05D002916 ORTHO05D003152 1.8e-11 73.9 101 41.6
DCAR_013390 Daucus carota HOM05D002916 ORTHO05D003152 1.8e-11 73.9 102 43.1
TAR623G0367 Trochodendron aralioides HOM05D002916 ORTHO05D003152 6.9e-11 72.0 89 48.3
PGR004G1189 Punica granatum HOM05D002916 ORTHO05D003152 9.0e-11 71.6 100 45.0
BcaNung06240 Brassica carinata HOM05D002916 ORTHO05D003152 1.5e-10 70.9 103 42.7
THA.LOC104816397 Tarenaya hassleriana HOM05D002916 ORTHO05D003152 2.6e-10 70.1 121 35.5
A05p38970 Brassica napus HOM05D002916 ORTHO05D003152 5.9e-10 68.9 103 41.7
BolC5t34456H Brassica oleracea HOM05D002916 ORTHO05D003152 5.9e-10 68.9 103 41.7
C05p58000 Brassica napus HOM05D002916 ORTHO05D003152 7.7e-10 68.6 103 40.8
Eucgr.K02033 Eucalyptus grandis HOM05D002916 ORTHO05D003152 7.7e-10 68.6 114 43.9
BraA05t22688Z Brassica rapa HOM05D002916 ORTHO05D003152 1.0e-09 68.2 103 40.8
Sp3g08400 Schrenkiella parvula HOM05D002916 ORTHO05D003152 1.0e-09 68.2 114 38.6
PGSC0003DMG400008880 Solanum tuberosum HOM05D002916 ORTHO05D003152 1.0e-09 68.2 136 39.0
BcaNung05911 Brassica carinata HOM05D002916 ORTHO05D003152 2.9e-09 66.6 113 38.9
CARHR084600 Cardamine hirsuta HOM05D002916 ORTHO05D003152 2.9e-09 66.6 114 39.5
DCAR_013389 Daucus carota HOM05D002916 ORTHO05D003152 2.9e-09 66.6 102 42.2
AL3G21460 Arabidopsis lyrata HOM05D002916 ORTHO05D003152 3.8e-09 66.2 115 40.0
PSO339G4347 Papaver somniferum HOM05D002916 ORTHO05D003152 5.0e-09 65.9 115 39.1
Carub.0008s0814 Capsella rubella HOM05D002916 ORTHO05D003152 6.5e-09 65.5 118 38.1
CSS0010688 Camellia sinensis var. sinensis HOM05D002916 ORTHO05D003152 1.1e-08 64.7 69 55.1
Sopen09g004570 Solanum pennellii HOM05D002916 ORTHO05D003152 1.1e-08 64.7 63 52.4
AT3G10120 Arabidopsis thaliana HOM05D002916 ORTHO05D003152 1.4e-08 64.3 116 39.7
Solyc09g009810.1 Solanum lycopersicum HOM05D002916 ORTHO05D003152 1.4e-08 64.3 136 36.0
CANSAT64G0492 Cannabis sativa HOM05D002916 ORTHO05D003152 2.5e-08 63.5 131 42.0
DCAR_013392 Daucus carota HOM05D002916 ORTHO05D003152 3.2e-08 63.2 102 41.2
Thhalv10021626m.g Eutrema salsugineum HOM05D002916 ORTHO05D003152 1.2e-07 61.2 122 33.6
PGR142G0380 Punica granatum HOM05D002916 ORTHO05D003152 1.2e-07 61.2 114 39.5
BcaC09g48115 Brassica carinata HOM05D002916 ORTHO05D003152 1.6e-07 60.8 112 37.5
BolC1t05420H Brassica oleracea HOM05D002916 ORTHO05D003152 1.6e-07 60.8 112 37.5
Thhalv10014801m.g Eutrema salsugineum HOM05D002916 ORTHO05D003152 1.6e-07 60.8 123 37.4
DCAR_013391 Daucus carota HOM05D002916 ORTHO05D003152 2.7e-07 60.1 102 39.2
arahy.Tifrunner.gnm1.ann1.1GMW3T Arachis hypogaea HOM05D002916 ORTHO05D003152 3.6e-07 59.7 125 33.6
arahy.Tifrunner.gnm1.ann1.T8X57X Arachis hypogaea HOM05D002916 ORTHO05D003152 3.6e-07 59.7 125 33.6
BcaB04g21229 Brassica carinata HOM05D002916 ORTHO05D003152 3.6e-07 59.7 114 36.8
A03p01480 Brassica napus HOM05D002916 ORTHO05D003152 6.1e-07 58.9 123 38.2
BraA03t09526Z Brassica rapa HOM05D002916 ORTHO05D003152 6.1e-07 58.9 123 38.2
Sp6g38840 Schrenkiella parvula HOM05D002916 ORTHO05D003152 1.8e-06 57.4 121 37.2
Aa31LG3G2650 Aethionema arabicum HOM05D002916 ORTHO05D003152 2.3e-06 57.0 120 36.7
C03p01810 Brassica napus HOM05D002916 ORTHO05D003152 3.0e-06 56.6 123 36.6
AT5G03890 Arabidopsis thaliana HOM05D002916 ORTHO05D003152 6.7e-06 55.5 119 36.1
CARHR209370 Cardamine hirsuta HOM05D002916 ORTHO05D003152 6.7e-06 55.5 118 33.9
SGA_v2.0_scaffold18G08210 Striga asiatica HOM05D005269 ORTHO05D006429 6.7e-06 55.5 59 55.9


User provided reference genes

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