Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G3018 Salvia bowleyana HOM05D011761 ORTHO05D013885 2.6e-253 878.2 454 100.0
SalBow4G2523 Salvia bowleyana HOM05D011761 ORTHO05D013885 2.3e-249 865.1 454 98.7
Zm00001eb374420 Zea mays HOM05D011761 ORTHO05D013885 1.0e-79 301.6 349 54.2
Os02g0791450 Oryza sativa ssp. japonica HOM05D011761 ORTHO05D013885 6.6e-79 298.9 401 49.6
Zm00001eb317530 Zea mays HOM05D011761 ORTHO05D013885 1.3e-58 231.5 368 45.4
Os08g0526150 Oryza sativa ssp. japonica HOM05D011761 ORTHO05D013885 3.5e-56 223.4 341 44.3
SGA_v2.0_scaffold2G01169 Striga asiatica HOM05D011761 ORTHO05D013885 3.5e-48 196.8 221 53.8
Nn3g20081 Nelumbo nucifera HOM05D011761 ORTHO05D013885 2.4e-28 131.0 264 36.7
FAN22G0735 Fragaria x ananassa HOM05D011761 ORTHO05D013885 8.8e-23 112.5 180 47.2
Nn2g12532 Nelumbo nucifera HOM05D011761 ORTHO05D013885 4.7e-16 90.1 159 38.4
Nn5g30672 Nelumbo nucifera HOM05D011761 ORTHO05D013885 8.8e-15 85.9 128 42.2
Potri.002G116750 Populus trichocarpa HOM05D011761 ORTHO05D013885 9.7e-14 82.4 122 39.3
Nn1g08187 Nelumbo nucifera HOM05D011761 ORTHO05D013885 3.2e-09 67.4 100 42.0
Nn8g40217 Nelumbo nucifera HOM05D011761 ORTHO05D013885 8.8e-07 59.3 75 40.0


User provided reference genes

Program Settings