Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G2200 Salvia bowleyana HOM05D000135 ORTHO05D000816 6.7e-22 107.5 108 100.0
SalBow4G2877 Salvia bowleyana HOM05D000135 ORTHO05D000816 6.7e-22 107.5 108 100.0
MSTRG.3087 Avicennia marina HOM05D000135 ORTHO05D000816 6.3e-12 74.3 50 74.0
Lsat_1_v5_gn_9_1180 Lactuca sativa HOM05D000135 ORTHO05D000816 1.1e-11 73.6 50 76.0
Rhsim10G0007700 Rhododendron simsii HOM05D000135 ORTHO05D000816 7.7e-10 67.4 50 68.0
Rhsim10G0007800 Rhododendron simsii HOM05D000135 ORTHO05D000816 7.7e-10 67.4 50 68.0
Rhsim10G0007900 Rhododendron simsii HOM05D000135 ORTHO05D000816 7.7e-10 67.4 50 68.0
Rhsim10G0008000 Rhododendron simsii HOM05D000135 ORTHO05D000816 7.7e-10 67.4 50 68.0
Nitab4.5_0002887g0060 Nicotiana tabacum HOM05D000135 ORTHO05D000816 1.3e-09 66.6 51 66.7
ECA246G1426 Erigeron canadensis HOM05D000135 ORTHO05D000816 2.2e-09 65.9 47 74.5
HanXRQChr15g0474941 Helianthus annuus HOM05D000135 ORTHO05D000816 2.2e-09 65.9 47 74.5
Oeu013949.1 Olea europaea HOM05D000135 ORTHO05D000816 2.2e-09 65.9 51 66.7
Peaxi162Scf00700g00017 Petunia axillaris HOM05D000135 ORTHO05D000816 2.2e-09 65.9 51 66.7
Medtr6g023460 Medicago truncatula HOM05D000135 ORTHO05D000816 3.8e-09 65.1 51 62.7
Psat1g085520 Pisum sativum HOM05D000135 ORTHO05D000816 5.0e-09 64.7 51 62.7
PGR083G0560 Punica granatum HOM05D000135 ORTHO05D000816 8.5e-09 63.9 47 70.2
Hma1.2p1_1219F.1_g267950 Hydrangea macrophylla HOM05D000135 ORTHO05D000816 1.5e-08 63.2 52 61.5
unitig_748.g7057 Utricularia gibba HOM05D000135 ORTHO05D000816 1.9e-08 62.8 49 69.4
Hma1.2p1_1219F.1_g267940 Hydrangea macrophylla HOM05D000135 ORTHO05D000816 3.2e-08 62.0 52 61.5
Lsat_1_v5_gn_4_185301 Lactuca sativa HOM05D000135 ORTHO05D000816 3.2e-08 62.0 47 70.2
Lj1g0014603 Lotus japonicus HOM05D000135 ORTHO05D000816 3.2e-08 62.0 48 64.6
Oeu035215.1 Olea europaea HOM05D000135 ORTHO05D000816 3.2e-08 62.0 51 62.7
Peaxi162Scf00420g00047 Petunia axillaris HOM05D000135 ORTHO05D000816 3.2e-08 62.0 51 60.8
vmacro05943 Vaccinium macrocarpon HOM05D000135 ORTHO05D000816 3.2e-08 62.0 50 62.0
Actinidia05909 Actinidia chinensis HOM05D000135 ORTHO05D000816 4.2e-08 61.6 51 60.8
CiPaw.04G035100 Carya illinoinensis HOM05D000135 ORTHO05D000816 4.2e-08 61.6 47 66.0
Rhsim08G0044100 Rhododendron simsii HOM05D000135 ORTHO05D000816 4.2e-08 61.6 52 63.5
Atru.chr6.2532 Acer truncatum HOM05D000135 ORTHO05D000816 5.5e-08 61.2 46 67.4
Phvul.001G095600 Phaseolus vulgaris HOM05D000135 ORTHO05D000816 7.2e-08 60.8 51 58.8
VMungo0464G1988 Vigna mungo HOM05D000135 ORTHO05D000816 7.2e-08 60.8 47 66.0
CiPaw.03G053600 Carya illinoinensis HOM05D000135 ORTHO05D000816 9.4e-08 60.5 48 62.5
Manes.15G159100 Manihot esculenta HOM05D000135 ORTHO05D000816 9.4e-08 60.5 47 68.1
CAN.G473.85 Capsicum annuum HOM05D000135 ORTHO05D000816 2.1e-07 59.3 51 60.8
MBI01_g09380_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D000816 3.6e-07 58.5 48 64.6
MBI01_g44779_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D000816 3.6e-07 58.5 48 64.6
MBI02_g10682_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D000816 3.6e-07 58.5 48 62.5
RcHm_v2.0_Chr2g0175201 Rosa chinensis HOM05D000135 ORTHO05D000816 3.6e-07 58.5 51 58.8
CANSAT64G0052 Cannabis sativa HOM05D000135 ORTHO05D000816 4.7e-07 58.2 49 55.1
vmacro05944 Vaccinium macrocarpon HOM05D000135 ORTHO05D000816 4.7e-07 58.2 46 65.2
Potri.001G332900 Populus trichocarpa HOM05D000135 ORTHO05D000816 6.1e-07 57.8 47 63.8
TAR622G0218 Trochodendron aralioides HOM05D000135 ORTHO05D000816 8.0e-07 57.4 48 62.5
CSS0033756 Camellia sinensis var. sinensis HOM05D000135 ORTHO05D000816 1.0e-06 57.0 50 60.0
FAN02G0421 Fragaria x ananassa HOM05D000135 ORTHO05D000816 1.0e-06 57.0 51 54.9
Gohir.A07G226850 Gossypium hirsutum HOM05D000135 ORTHO05D000816 1.4e-06 56.6 39 64.1
Oeu011957.1 Olea europaea HOM05D000135 ORTHO05D000816 1.4e-06 56.6 48 62.5
FAN09G3833 Fragaria x ananassa HOM05D000135 ORTHO05D000816 2.3e-06 55.8 51 54.9
TAR622G0710 Trochodendron aralioides HOM05D000135 ORTHO05D000816 2.3e-06 55.8 48 60.4
Eucgr.J02318 Eucalyptus grandis HOM05D000135 ORTHO05D000816 3.0e-06 55.5 51 56.9
FvH4_6g53150 Fragaria vesca HOM05D000135 ORTHO05D000816 3.0e-06 55.5 50 56.0
FAN08G0825 Fragaria x ananassa HOM05D000135 ORTHO05D000816 3.0e-06 55.5 51 52.9
FAN14G0778 Fragaria x ananassa HOM05D000135 ORTHO05D000816 3.0e-06 55.5 50 56.0
FAN18G3513 Fragaria x ananassa HOM05D000135 ORTHO05D000816 3.0e-06 55.5 51 52.9
MD06G1143500 Malus domestica HOM05D000135 ORTHO05D000816 4.0e-06 55.1 51 51.0
FvH4_5g08060 Fragaria vesca HOM05D000135 ORTHO05D000816 6.7e-06 54.3 51 51.0
MD17G1014200 Malus domestica HOM05D000135 ORTHO05D000816 6.7e-06 54.3 47 59.6
Prupe.3G303600 Prunus persica HOM05D000135 ORTHO05D000816 6.7e-06 54.3 47 59.6
PGSC0003DMG400013427 Solanum tuberosum HOM05D000135 ORTHO05D000816 6.7e-06 54.3 49 59.2
HPP92_018865 Vanilla planifolia HOM05D000135 ORTHO05D000816 6.7e-06 54.3 51 56.9
FAN04G2593 Fragaria x ananassa HOM05D000135 ORTHO05D000816 8.8e-06 53.9 51 51.0
Gorai.001G269500 Gossypium raimondii HOM05D000135 ORTHO05D000816 8.8e-06 53.9 48 54.2
Prupe.5G152700 Prunus persica HOM05D000135 ORTHO05D000816 8.8e-06 53.9 51 51.0


User provided reference genes

Program Settings