Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G2873 Salvia bowleyana HOM05D005699 ORTHO05D007496 5.5e-240 833.9 436 100.0
Migut.M00694 Erythranthe guttata HOM05D005699 ORTHO05D007496 4.7e-106 389.0 306 71.9
SGA_v2.0_scaffold73G24389 Striga asiatica HOM05D005699 ORTHO05D007496 4.8e-103 379.0 322 66.5
Dinv13365 Davidia involucrata HOM05D005699 ORTHO05D007496 5.3e-102 375.6 243 79.0
Oeu010029.1 Olea europaea HOM05D005699 ORTHO05D007496 5.9e-101 372.1 245 79.6
Lj8A146G72 Lonicera japonica HOM05D005699 ORTHO05D007496 1.3e-100 370.9 303 68.6
MSTRG.6687 Avicennia marina HOM05D005699 ORTHO05D007496 1.7e-100 370.5 296 68.9
Nitab4.5_0000347g0060 Nicotiana tabacum HOM05D005699 ORTHO05D007496 1.5e-99 367.5 293 70.0
Hma1.2p1_0050F.1_g028850 Hydrangea macrophylla HOM05D005699 ORTHO05D007496 5.5e-99 365.5 243 77.0
Peaxi162Scf00111g01334 Petunia axillaris HOM05D005699 ORTHO05D007496 1.8e-97 360.5 280 72.1
Cc05_g10740 Coffea canephora HOM05D005699 ORTHO05D007496 3.0e-97 359.8 246 77.6
DCAR_013779 Daucus carota HOM05D005699 ORTHO05D007496 4.0e-97 359.4 298 66.1
EL10Ac4g08415 Beta vulgaris HOM05D005699 ORTHO05D007496 5.2e-97 359.0 311 68.5
HanXRQChr14g0439361 Helianthus annuus HOM05D005699 ORTHO05D007496 1.5e-96 357.5 274 69.7
Ciclev10021126m.g Citrus clementina HOM05D005699 ORTHO05D007496 3.4e-96 356.3 231 79.7
Atru.chr2.2008 Acer truncatum HOM05D005699 ORTHO05D007496 4.4e-96 355.9 319 63.6
Potri.001G384300 Populus trichocarpa HOM05D005699 ORTHO05D007496 9.8e-96 354.8 233 77.3
Solyc07g062180.4 Solanum lycopersicum HOM05D005699 ORTHO05D007496 1.7e-95 354.0 280 70.4
Cpa.g.sc77.58 Carica papaya HOM05D005699 ORTHO05D007496 3.7e-95 352.8 287 67.9
Potri.011G105700 Populus trichocarpa HOM05D005699 ORTHO05D007496 3.7e-95 352.8 233 77.3
CAN.G375.48 Capsicum annuum HOM05D005699 ORTHO05D007496 4.8e-95 352.4 314 65.6
Actinidia12601 Actinidia chinensis HOM05D005699 ORTHO05D007496 6.3e-95 352.1 292 67.5
MD03G1247900 Malus domestica HOM05D005699 ORTHO05D007496 8.3e-95 351.7 261 69.0
Sabra11G0074900 Salix brachista HOM05D005699 ORTHO05D007496 1.1e-94 351.3 233 76.8
Sabra11G0080500 Salix brachista HOM05D005699 ORTHO05D007496 1.1e-94 351.3 233 77.3
MD11G1269700 Malus domestica HOM05D005699 ORTHO05D007496 1.4e-94 350.9 261 69.3
TAR629G2232 Trochodendron aralioides HOM05D005699 ORTHO05D007496 1.4e-94 350.9 289 67.5
CSS0029451 Camellia sinensis var. sinensis HOM05D005699 ORTHO05D007496 1.8e-94 350.5 309 63.1
Eucgr.F01366 Eucalyptus grandis HOM05D005699 ORTHO05D007496 1.8e-94 350.5 233 79.0
Nitab4.5_0003230g0020 Nicotiana tabacum HOM05D005699 ORTHO05D007496 5.4e-94 349.0 323 63.8
SalBow7G3647 Salvia bowleyana HOM05D005699 ORTHO05D007496 5.4e-94 349.0 238 74.8
Cfa019514 Carpinus fangiana HOM05D005699 ORTHO05D007496 7.0e-94 348.6 234 75.6
AUR62019646 Chenopodium quinoa HOM05D005699 ORTHO05D007496 7.0e-94 348.6 307 66.4
CsaV3_4G008250 Cucumis sativus L. HOM05D005699 ORTHO05D007496 9.1e-94 348.2 232 77.6
CSS0007542 Camellia sinensis var. sinensis HOM05D005699 ORTHO05D007496 1.2e-93 347.8 246 74.4
ECA240G3195 Erigeron canadensis HOM05D005699 ORTHO05D007496 1.2e-93 347.8 297 66.0
FAN21G2533 Fragaria x ananassa HOM05D005699 ORTHO05D007496 1.2e-93 347.8 294 64.6
Manes.15G097700 Manihot esculenta HOM05D005699 ORTHO05D007496 1.2e-93 347.8 273 70.3
Ah.04g164050 Amaranthus hybridus HOM05D005699 ORTHO05D007496 3.5e-93 346.3 297 64.6
Thecc.07G132200 Theobroma cacao HOM05D005699 ORTHO05D007496 3.5e-93 346.3 233 74.7
Gohir.A11G289100 Gossypium hirsutum HOM05D005699 ORTHO05D007496 7.7e-93 345.1 232 74.6
Lsat_1_v5_gn_9_100441 Lactuca sativa HOM05D005699 ORTHO05D007496 1.7e-92 344.0 306 62.7
PSO541G1284 Papaver somniferum HOM05D005699 ORTHO05D007496 1.7e-92 344.0 303 63.4
FAN25G0494 Fragaria x ananassa HOM05D005699 ORTHO05D007496 2.2e-92 343.6 294 63.9
COL.COLO4_17478 Corchorus olitorius HOM05D005699 ORTHO05D007496 2.9e-92 343.2 232 74.1
FAN16G3421 Fragaria x ananassa HOM05D005699 ORTHO05D007496 2.9e-92 343.2 298 64.1
FAN11G1539 Fragaria x ananassa HOM05D005699 ORTHO05D007496 3.8e-92 342.8 293 65.5
Gohir.D11G303400 Gossypium hirsutum HOM05D005699 ORTHO05D007496 3.8e-92 342.8 297 63.3
HanXRQChr13g0389711 Helianthus annuus HOM05D005699 ORTHO05D007496 5.0e-92 342.4 294 64.6
Gorai.007G331300 Gossypium raimondii HOM05D005699 ORTHO05D007496 8.5e-92 341.7 297 63.3
Sed0019309 Sechium edule HOM05D005699 ORTHO05D007496 1.5e-91 340.9 232 75.9
Lj1A824T64 Lonicera japonica HOM05D005699 ORTHO05D007496 1.9e-91 340.5 235 76.6
RcHm_v2.0_Chr5g0029561 Rosa chinensis HOM05D005699 ORTHO05D007496 1.9e-91 340.5 293 66.6
AUR62039586 Chenopodium quinoa HOM05D005699 ORTHO05D007496 4.2e-91 339.3 307 65.1
unitig_37.g12557 Utricularia gibba HOM05D005699 ORTHO05D007496 5.5e-91 339.0 295 63.7
CiPaw.12G110500 Carya illinoinensis HOM05D005699 ORTHO05D007496 7.2e-91 338.6 231 74.9
Glyma.12G233800 Glycine max HOM05D005699 ORTHO05D007496 7.2e-91 338.6 228 77.2
MSTRG.14252 Avicennia marina HOM05D005699 ORTHO05D007496 9.4e-91 338.2 262 69.8
PGR083G0120 Punica granatum HOM05D005699 ORTHO05D007496 4.7e-90 335.9 301 62.1
Ca_03931_v3 Cicer arietinum L. HOM05D005699 ORTHO05D007496 6.1e-90 335.5 266 68.8
GSVIVG01014100001 Vitis vinifera HOM05D005699 ORTHO05D007496 6.1e-90 335.5 290 65.5
MBI06_g08519_MAGBIO Magnolia biondii HOM05D005699 ORTHO05D007496 8.0e-90 335.1 230 73.0
Glyma.13G265200 Glycine max HOM05D005699 ORTHO05D007496 1.0e-89 334.7 313 63.9
Haze_09244 Corylus avellana HOM05D005699 ORTHO05D007496 1.4e-89 334.3 231 75.8
Lj3g0018973 Lotus japonicus HOM05D005699 ORTHO05D007496 1.8e-89 334.0 271 66.4
Nn3g21006 Nelumbo nucifera HOM05D005699 ORTHO05D007496 2.3e-89 333.6 298 62.8
Aqoxy1G01911 Aquilegia oxysepala HOM05D005699 ORTHO05D007496 3.0e-89 333.2 233 72.1
Prupe.4G156800 Prunus persica HOM05D005699 ORTHO05D007496 3.0e-89 333.2 298 62.8
Phvul.005G076800 Phaseolus vulgaris HOM05D005699 ORTHO05D007496 4.0e-89 332.8 296 62.8
TWI39G0441 Tripterygium wilfordii HOM05D005699 ORTHO05D007496 4.0e-89 332.8 233 71.2
QL08p037175 Quercus lobata HOM05D005699 ORTHO05D007496 6.8e-89 332.0 228 75.9
QL08p037250 Quercus lobata HOM05D005699 ORTHO05D007496 6.8e-89 332.0 228 75.9
Lalb_Chr20g0109131 Lupinus albus HOM05D005699 ORTHO05D007496 8.8e-89 331.6 290 64.8
AL2G39020 Arabidopsis lyrata HOM05D005699 ORTHO05D007496 1.5e-88 330.9 233 72.1
Carub.0002s2547 Capsella rubella HOM05D005699 ORTHO05D007496 1.5e-88 330.9 233 72.1
THA.LOC104813995 Tarenaya hassleriana HOM05D005699 ORTHO05D007496 1.5e-88 330.9 238 69.7
Aa31LG4G2340 Aethionema arabicum HOM05D005699 ORTHO05D007496 2.6e-88 330.1 234 72.6
CARHR072140 Cardamine hirsuta HOM05D005699 ORTHO05D007496 2.6e-88 330.1 233 71.2
DCAR_019613 Daucus carota HOM05D005699 ORTHO05D007496 2.6e-88 330.1 237 72.2
PGSC0003DMG400007091 Solanum tuberosum HOM05D005699 ORTHO05D007496 2.6e-88 330.1 359 57.9
arahy.Tifrunner.gnm1.ann1.EKI9R8 Arachis hypogaea HOM05D005699 ORTHO05D007496 4.4e-88 329.3 304 64.1
Rhsim06G0211500 Rhododendron simsii HOM05D005699 ORTHO05D007496 5.7e-88 328.9 307 61.6
AT1G78620 Arabidopsis thaliana HOM05D005699 ORTHO05D007496 7.5e-88 328.6 301 61.8
CSS0028539 Camellia sinensis var. sinensis HOM05D005699 ORTHO05D007496 7.5e-88 328.6 265 68.7
ATR0213G027 Amborella trichopoda HOM05D005699 ORTHO05D007496 3.1e-86 323.2 234 69.2
Medtr2g073380 Medicago truncatula HOM05D005699 ORTHO05D007496 3.1e-86 323.2 294 64.3
Thhalv10018838m.g Eutrema salsugineum HOM05D005699 ORTHO05D007496 5.4e-86 322.4 300 61.7
VMungo1080G0954 Vigna mungo HOM05D005699 ORTHO05D007496 5.4e-86 322.4 298 62.1
BcaC08g47425 Brassica carinata HOM05D005699 ORTHO05D007496 9.1e-86 321.6 294 61.2
BraA07t31896Z Brassica rapa HOM05D005699 ORTHO05D007496 9.1e-86 321.6 294 60.9
A07p43890 Brassica napus HOM05D005699 ORTHO05D007496 1.2e-85 321.2 294 60.9
BcaC08g47427 Brassica carinata HOM05D005699 ORTHO05D007496 2.0e-85 320.5 292 61.6
ClCG07G010100 Citrullus lanatus HOM05D005699 ORTHO05D007496 3.5e-85 319.7 342 55.3
C06p52520 Brassica napus HOM05D005699 ORTHO05D007496 5.9e-85 318.9 294 60.5
Os01g0729100 Oryza sativa ssp. japonica HOM05D005699 ORTHO05D007496 1.0e-84 318.2 222 73.0
unitig_746.g26834 Utricularia gibba HOM05D005699 ORTHO05D007496 3.8e-84 316.2 243 66.7
Psat5g233280 Pisum sativum HOM05D005699 ORTHO05D007496 5.0e-84 315.8 233 69.5
Sp5g33710 Schrenkiella parvula HOM05D005699 ORTHO05D007496 1.1e-83 314.7 310 57.4
BolC6t40271H Brassica oleracea HOM05D005699 ORTHO05D007496 5.5e-83 312.4 304 58.9
Hma1.2p1_0050F.1_g028840 Hydrangea macrophylla HOM05D005699 ORTHO05D007496 1.0e-81 308.1 257 68.1
Sc16g0007730 Simmondsia chinensis HOM05D005699 ORTHO05D007496 2.9e-79 300.1 236 69.1
Manes.03G092700 Manihot esculenta HOM05D005699 ORTHO05D007496 8.3e-79 298.5 245 68.2
FvH4_3g17770 Fragaria vesca HOM05D005699 ORTHO05D007496 1.3e-76 291.2 220 70.0
MELO3C016111.2 Cucumis melo HOM05D005699 ORTHO05D007496 2.3e-76 290.4 210 73.8
TPR.G13095 Trifolium pratense HOM05D005699 ORTHO05D007496 4.7e-74 282.7 240 65.8
AagrBONN_evm.TU.Sc2ySwM_228.4605 Anthoceros agrestis HOM05D005699 ORTHO05D007496 4.0e-73 279.6 233 61.4
CiPaw.11G155600 Carya illinoinensis HOM05D005699 ORTHO05D007496 1.2e-72 278.1 196 75.0
CDE02G0824 Ceratophyllum demersum HOM05D005699 ORTHO05D007496 1.1e-70 271.6 222 63.5
Pp3c13_15320 Physcomitrium patens HOM05D005699 ORTHO05D007496 7.0e-70 268.9 234 58.5
CBR_g26242 Chara braunii HOM05D005699 ORTHO05D007496 6.6e-68 262.3 220 60.9
SMO331G0093 Selaginella moellendorffii HOM05D005699 ORTHO05D007496 3.6e-66 256.5 234 57.7
Mapoly0056s0015 Marchantia polymorpha HOM05D005699 ORTHO05D007496 1.5e-64 251.1 227 55.5
Pp3c13_3550 Physcomitrium patens HOM05D005699 ORTHO05D007496 3.7e-63 246.5 229 56.8
Sopen07g030460 Solanum pennellii HOM05D005699 ORTHO05D007496 5.1e-60 236.1 153 79.7
SHI27569 Sapria himalayana HOM05D005699 ORTHO05D007496 7.3e-59 232.3 248 54.0
Actinidia37024 Actinidia chinensis HOM05D005699 ORTHO05D007496 8.1e-58 228.8 237 58.2
vmacro11968 Vaccinium macrocarpon HOM05D005699 ORTHO05D007496 2.1e-53 214.2 171 69.6
Zm00001eb361870 Zea mays HOM05D005699 ORTHO05D007496 8.6e-52 208.8 158 69.0
MCO15G637 Micromonas commoda HOM05D005699 ORTHO05D007496 3.4e-48 196.8 226 50.9
SEGI_05295 Sequoiadendron giganteum HOM05D005699 ORTHO05D007496 7.6e-48 195.7 213 51.6
Cre06.g294800 Chlamydomonas reinhardtii HOM05D005699 ORTHO05D007496 3.8e-47 193.4 204 52.9
HPP92_006376 Vanilla planifolia HOM05D005699 ORTHO05D007496 3.0e-44 183.7 220 52.3
PRCOL_00000954 Prasinoderma coloniale HOM05D005699 ORTHO05D007496 4.9e-39 166.4 255 40.8
CDE06G0498 Ceratophyllum demersum HOM05D005699 ORTHO05D007496 3.9e-36 156.8 229 41.5
Medtr7g055620 Medicago truncatula HOM05D005699 ORTHO05D007496 1.7e-23 114.8 87 71.3
Thecc.07G131400 Theobroma cacao HOM05D005699 ORTHO05D007496 8.2e-18 95.9 72 63.9
Thecc.07G131900 Theobroma cacao HOM05D005699 ORTHO05D007496 9.0e-17 92.4 85 55.3
Thecc.07G131100 Theobroma cacao HOM05D005699 ORTHO05D007496 6.5e-15 86.3 72 56.9
MELO3C029615.2 Cucumis melo HOM05D005699 ORTHO05D170539 3.5e-13 80.5 57 73.7
MELO3C032042.2 Cucumis melo HOM05D005699 ORTHO05D000044 6.7e-12 76.3 53 75.5
BcaB02g07173 Brassica carinata HOM05D005699 ORTHO05D091938 5.9e-08 63.2 87 46.0
Actinidia39422 Actinidia chinensis HOM05D005699 ORTHO05D056065 2.2e-07 61.2 42 69.0
FvH4_7g00710 Fragaria vesca HOM05D005699 ORTHO05D046157 5.5e-06 56.6 48 52.1
Mapoly0052s0018 Marchantia polymorpha HOM05D006393 ORTHO05D008088 7.2e-06 56.2 217 30.0


User provided reference genes

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