Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G2833 Salvia bowleyana HOM05D003606 ORTHO05D004650 6.3e-86 321.2 166 100.0
Ah.10g038660 Amaranthus hybridus HOM05D003606 ORTHO05D004650 1.2e-41 174.1 319 37.0
SalBow4G1900 Salvia bowleyana HOM05D003606 ORTHO05D004650 8.1e-41 171.4 298 44.6
C09p42410 Brassica napus HOM05D003606 ORTHO05D004650 2.9e-38 162.9 215 42.8
SGA_v2.0_scaffold138G35254 Striga asiatica HOM05D003606 ORTHO05D004650 8.3e-38 161.4 292 43.5
Ciclev10015115m.g Citrus clementina HOM05D003606 ORTHO05D004650 2.7e-36 156.4 300 41.0
Actinidia02534 Actinidia chinensis HOM05D000009 ORTHO05D004650 1.3e-35 154.1 299 40.5
BolC9t57121H Brassica oleracea HOM05D003606 ORTHO05D004650 3.9e-35 152.5 242 38.0
arahy.Tifrunner.gnm1.ann1.ZXEF1Z Arachis hypogaea HOM05D003606 ORTHO05D004650 7.3e-34 148.3 283 36.7
FvH4_7g01500 Fragaria vesca HOM05D003606 ORTHO05D004650 1.4e-32 144.1 300 39.0
FAN01G0800 Fragaria x ananassa HOM05D003606 ORTHO05D004650 1.4e-32 144.1 300 39.0
FAN03G2659 Fragaria x ananassa HOM05D003606 ORTHO05D004650 1.4e-32 144.1 300 39.0
FAN06G2132 Fragaria x ananassa HOM05D003606 ORTHO05D004650 1.4e-32 144.1 300 39.0
FAN10G3084 Fragaria x ananassa HOM05D003606 ORTHO05D004650 3.1e-32 142.9 300 38.7
Dinv09318 Davidia involucrata HOM05D003606 ORTHO05D004650 4.0e-32 142.5 303 39.6
SEGI_00890 Sequoiadendron giganteum HOM05D003606 ORTHO05D004650 5.2e-32 142.1 299 37.1
ClCG10G012220 Citrullus lanatus HOM05D003606 ORTHO05D004650 3.4e-31 139.4 314 37.9
Lj3A990T71 Lonicera japonica HOM05D003606 ORTHO05D004650 4.4e-31 139.0 303 38.9
A10p29890 Brassica napus HOM05D003606 ORTHO05D004650 5.8e-31 138.7 284 36.6
BcaC04g20537 Brassica carinata HOM05D003606 ORTHO05D004650 7.6e-31 138.3 266 39.5
ATR0626G036 Amborella trichopoda HOM05D003606 ORTHO05D004650 1.7e-30 137.1 295 39.0
PGR031G1688 Punica granatum HOM05D003606 ORTHO05D004650 1.7e-30 137.1 294 38.4
RcHm_v2.0_Chr1g0317321 Rosa chinensis HOM05D003606 ORTHO05D004650 1.7e-30 137.1 295 39.0
COL.COLO4_04879 Corchorus olitorius HOM05D003606 ORTHO05D004650 1.9e-29 133.7 304 38.2
Glyma.16G165100 Glycine max HOM05D003606 ORTHO05D004650 1.9e-29 133.7 299 38.8
Sc23g0005910 Simmondsia chinensis HOM05D003606 ORTHO05D004650 2.4e-29 133.3 303 38.3
Peaxi162Scf00089g01530 Petunia axillaris HOM05D003606 ORTHO05D004650 3.2e-29 132.9 299 39.5
Migut.D00412 Erythranthe guttata HOM05D003606 ORTHO05D004650 5.4e-29 132.1 300 38.7
Oeu025828.1 Olea europaea HOM05D003606 ORTHO05D004650 7.1e-29 131.7 235 37.0
Manes.10G139000 Manihot esculenta HOM05D003606 ORTHO05D004650 1.6e-28 130.6 299 38.5
Sabra09G0042600 Salix brachista HOM05D003606 ORTHO05D004650 1.6e-28 130.6 299 38.5
MSTRG.2635 Avicennia marina HOM05D003606 ORTHO05D004650 2.1e-28 130.2 299 38.8
unitig_26.g10141 Utricularia gibba HOM05D003606 ORTHO05D004650 2.1e-28 130.2 240 45.0
Prupe.2G020500 Prunus persica HOM05D003606 ORTHO05D004650 2.7e-28 129.8 299 38.5
Nitab4.5_0012005g0010 Nicotiana tabacum HOM05D003606 ORTHO05D004650 3.5e-28 129.4 273 40.7
AT5G52820 Arabidopsis thaliana HOM05D003606 ORTHO05D004650 6.0e-28 128.6 297 36.0
Thecc.01G407200 Theobroma cacao HOM05D003606 ORTHO05D004650 7.8e-28 128.3 298 37.6
Phvul.004G092500 Phaseolus vulgaris HOM05D003606 ORTHO05D004650 1.0e-27 127.9 299 38.5
GSVIVG01032166001 Vitis vinifera HOM05D003606 ORTHO05D004650 1.0e-27 127.9 299 38.1
THA.LOC104819092 Tarenaya hassleriana HOM05D003606 ORTHO05D004650 1.3e-27 127.5 298 35.9
vmacro13693 Vaccinium macrocarpon HOM05D003606 ORTHO05D004650 1.7e-27 127.1 299 37.8
Hund21610 Selenicereus undatus HOM05D003606 ORTHO05D004650 2.3e-27 126.7 282 39.7
TWI32G0899 Tripterygium wilfordii HOM05D003606 ORTHO05D004650 2.3e-27 126.7 299 37.8
Lj5g0022697 Lotus japonicus HOM05D003606 ORTHO05D004650 3.0e-27 126.3 299 38.1
Cpa.g.sc19.249 Carica papaya HOM05D003606 ORTHO05D004650 3.9e-27 125.9 292 37.7
Gohir.A08G142700 Gossypium hirsutum HOM05D003606 ORTHO05D004650 6.6e-27 125.2 298 37.6
Gohir.D08G163700 Gossypium hirsutum HOM05D003606 ORTHO05D004650 6.6e-27 125.2 298 37.6
Manes.07G008500 Manihot esculenta HOM05D003606 ORTHO05D004650 6.6e-27 125.2 305 36.7
Solyc03g112530.3 Solanum lycopersicum HOM05D003606 ORTHO05D004650 6.6e-27 125.2 299 38.5
Sopen03g031590 Solanum pennellii HOM05D003606 ORTHO05D004650 6.6e-27 125.2 299 38.5
PGSC0003DMG400018107 Solanum tuberosum HOM05D003606 ORTHO05D004650 6.6e-27 125.2 299 38.5
TWI34G0860 Tripterygium wilfordii HOM05D003606 ORTHO05D004650 6.6e-27 125.2 303 37.6
MELO3C023992.2 Cucumis melo HOM05D003606 ORTHO05D004650 8.7e-27 124.8 299 37.5
CsaV3_3G031990 Cucumis sativus L. HOM05D003606 ORTHO05D004650 8.7e-27 124.8 299 37.5
Dinv43413 Davidia involucrata HOM05D003606 ORTHO05D004650 8.7e-27 124.8 299 37.5
BcaB05g21983 Brassica carinata HOM05D003606 ORTHO05D004650 1.5e-26 124.0 293 36.2
BcaC03g14497 Brassica carinata HOM05D003606 ORTHO05D004650 1.5e-26 124.0 293 36.2
A02p11600 Brassica napus HOM05D003606 ORTHO05D004650 1.5e-26 124.0 293 36.2
C02p19350 Brassica napus HOM05D003606 ORTHO05D004650 1.5e-26 124.0 293 36.2
BolC2t08070H Brassica oleracea HOM05D003606 ORTHO05D004650 1.5e-26 124.0 293 36.2
BraA02t06222Z Brassica rapa HOM05D003606 ORTHO05D004650 1.5e-26 124.0 293 36.2
Eucgr.G03357 Eucalyptus grandis HOM05D003606 ORTHO05D004650 1.5e-26 124.0 299 37.1
Thhalv10013442m.g Eutrema salsugineum HOM05D003606 ORTHO05D004650 1.5e-26 124.0 293 36.2
Gorai.004G170600 Gossypium raimondii HOM05D003606 ORTHO05D004650 1.5e-26 124.0 298 37.2
Nitab4.5_0001284g0090 Nicotiana tabacum HOM05D003606 ORTHO05D004650 1.5e-26 124.0 299 38.1
VMungo0464G1676 Vigna mungo HOM05D003606 ORTHO05D004650 1.5e-26 124.0 299 37.5
CiPaw.05G024300 Carya illinoinensis HOM05D003606 ORTHO05D004650 2.5e-26 123.2 299 37.5
DCAR_003761 Daucus carota HOM05D003606 ORTHO05D004650 2.5e-26 123.2 77 72.7
Duzib138G0203 Durio zibethinus HOM05D003606 ORTHO05D004650 4.3e-26 122.5 298 36.9
Rhsim07G0058400 Rhododendron simsii HOM05D003606 ORTHO05D004650 4.3e-26 122.5 299 36.8
AL8G27260 Arabidopsis lyrata HOM05D003606 ORTHO05D004650 5.6e-26 122.1 294 35.4
arahy.Tifrunner.gnm1.ann1.F9F3MK Arachis hypogaea HOM05D003606 ORTHO05D004650 5.6e-26 122.1 299 37.1
arahy.Tifrunner.gnm1.ann1.GAUK41 Arachis hypogaea HOM05D003606 ORTHO05D004650 5.6e-26 122.1 299 37.1
arahy.Tifrunner.gnm1.ann1.V59V4E Arachis hypogaea HOM05D003606 ORTHO05D004650 5.6e-26 122.1 299 37.1
Sp6g14980 Schrenkiella parvula HOM05D003606 ORTHO05D004650 7.3e-26 121.7 294 35.4
MD09G1280700 Malus domestica HOM05D003606 ORTHO05D004650 1.3e-25 120.9 71 78.9
PSO675G6796 Papaver somniferum HOM05D003606 ORTHO05D004650 1.3e-25 120.9 298 35.9
Potri.009G058000 Populus trichocarpa HOM05D003606 ORTHO05D004650 1.3e-25 120.9 299 37.1
Atru.chr11.2590 Acer truncatum HOM05D003606 ORTHO05D004650 1.6e-25 120.6 299 37.5
Lalb_Chr21g0315701 Lupinus albus HOM05D003606 ORTHO05D004650 1.6e-25 120.6 299 36.8
HanXRQChr16g0524861 Helianthus annuus HOM05D003606 ORTHO05D004650 2.1e-25 120.2 299 37.1
Aa31LG3G9060 Aethionema arabicum HOM05D003606 ORTHO05D004650 2.8e-25 119.8 296 35.1
Carub.0008s1298 Capsella rubella HOM05D003606 ORTHO05D004650 2.8e-25 119.8 293 35.5
AagrBONN_evm.TU.Sc2ySwM_344.4930 Anthoceros agrestis HOM05D003606 ORTHO05D004650 3.6e-25 119.4 303 35.0
AUR62009405 Chenopodium quinoa HOM05D003606 ORTHO05D004650 3.6e-25 119.4 298 36.6
CDE02G3858 Ceratophyllum demersum HOM05D003606 ORTHO05D004650 4.8e-25 119.0 299 36.5
HPP92_026819 Vanilla planifolia HOM05D003606 ORTHO05D004650 6.2e-25 118.6 275 30.9
BcaB08g35635 Brassica carinata HOM05D003606 ORTHO05D004650 1.4e-24 117.5 255 32.2
Sed0024972 Sechium edule HOM05D003606 ORTHO05D004650 1.4e-24 117.5 107 59.8
Ca_19553_v3 Cicer arietinum L. HOM05D003606 ORTHO05D004650 2.4e-24 116.7 293 37.2
Psat6g110240 Pisum sativum HOM05D003606 ORTHO05D004650 2.4e-24 116.7 297 36.7
Cc02_g29020 Coffea canephora HOM05D003606 ORTHO05D004650 4.0e-24 115.9 294 37.1
Glyma.02G080600 Glycine max HOM05D003606 ORTHO05D004650 4.0e-24 115.9 294 37.1
Os11g0594200 Oryza sativa ssp. japonica HOM05D003606 ORTHO05D004650 4.0e-24 115.9 294 36.4
TAR633G2243 Trochodendron aralioides HOM05D003606 ORTHO05D004650 5.3e-24 115.5 295 36.6
ECA234G3512 Erigeron canadensis HOM05D003606 ORTHO05D004650 6.9e-24 115.2 72 77.8
HanXRQChr17g0563081 Helianthus annuus HOM05D003606 ORTHO05D004650 6.9e-24 115.2 72 77.8
Lsat_1_v5_gn_4_31941 Lactuca sativa HOM05D003606 ORTHO05D004650 6.9e-24 115.2 299 36.5
AUR62034729 Chenopodium quinoa HOM05D003606 ORTHO05D004650 9.0e-24 114.8 107 58.9
SGA_v2.0_scaffold1G00601 Striga asiatica HOM05D003606 ORTHO05D004650 9.0e-24 114.8 291 37.5
TPR.G14490 Trifolium pratense HOM05D003606 ORTHO05D004650 9.0e-24 114.8 292 36.6
CBR_g38286 Chara braunii HOM05D003606 ORTHO05D004650 1.2e-23 114.4 293 33.8
AUR62023088 Chenopodium quinoa HOM05D003606 ORTHO05D004650 1.2e-23 114.4 106 60.4
AUR62029807 Chenopodium quinoa HOM05D003606 ORTHO05D004650 1.2e-23 114.4 106 60.4
Zm00001eb297740 Zea mays HOM05D003606 ORTHO05D004650 1.2e-23 114.4 294 35.4
Haze_03155 Corylus avellana HOM05D003606 ORTHO05D004650 1.5e-23 114.0 296 36.1
Nn5g28763 Nelumbo nucifera HOM05D003606 ORTHO05D004650 1.5e-23 114.0 295 36.3
CSS0009389 Camellia sinensis var. sinensis HOM05D003606 ORTHO05D004650 2.0e-23 113.6 72 75.0
CSS0037178 Camellia sinensis var. sinensis HOM05D003606 ORTHO05D004650 2.0e-23 113.6 72 75.0
CiPaw.05G162700 Carya illinoinensis HOM05D003606 ORTHO05D004650 2.0e-23 113.6 72 76.4
CARHR265750 Cardamine hirsuta HOM05D003606 ORTHO05D004650 2.6e-23 113.2 292 34.6
MD17G1287700 Malus domestica HOM05D003606 ORTHO05D004650 2.6e-23 113.2 299 36.5
Manes.07G009860 Manihot esculenta HOM05D003606 ORTHO05D004650 2.6e-23 113.2 72 75.0
Medtr1g054300 Medicago truncatula HOM05D003606 ORTHO05D004650 2.6e-23 113.2 293 36.9
Os10g0104500 Oryza sativa ssp. japonica HOM05D003606 ORTHO05D004650 2.6e-23 113.2 294 35.7
BcaC06g33533 Brassica carinata HOM05D003606 ORTHO05D004650 3.4e-23 112.8 290 33.8
CAN.G338.7 Capsicum annuum HOM05D003606 ORTHO05D004650 3.4e-23 112.8 72 76.4
TPR.G7603 Trifolium pratense HOM05D003606 ORTHO05D004650 3.4e-23 112.8 310 35.5
CANSAT01G2566 Cannabis sativa HOM05D003606 ORTHO05D004650 7.6e-23 111.7 294 34.0
HanXRQChr15g0491881 Helianthus annuus HOM05D003606 ORTHO05D004650 1.3e-22 110.9 72 76.4
Cfa010803 Carpinus fangiana HOM05D003606 ORTHO05D004650 1.7e-22 110.5 295 36.3
SHI00285 Sapria himalayana HOM05D003606 ORTHO05D004650 2.2e-22 110.2 331 32.3
BcaNung04849 Brassica carinata HOM05D003606 ORTHO05D004650 8.4e-22 108.2 304 33.2
C09p70260 Brassica napus HOM05D003606 ORTHO05D004650 8.4e-22 108.2 304 33.2
BolC9t59770H Brassica oleracea HOM05D003606 ORTHO05D004650 8.4e-22 108.2 304 33.2
PSO541G2647 Papaver somniferum HOM05D003606 ORTHO05D004650 1.9e-21 107.1 293 34.5
GSVIVG01032170001 Vitis vinifera HOM05D003606 ORTHO05D004650 1.9e-21 107.1 58 82.8
Ca_22822_v3 Cicer arietinum L. HOM05D003606 ORTHO05D000002 3.2e-21 106.3 209 34.9
QL06p005531 Quercus lobata HOM05D011240 ORTHO05D014254 5.4e-21 105.5 49 93.9
A10p10270 Brassica napus HOM05D003606 ORTHO05D004650 1.2e-20 104.4 113 59.3
BraA10t43107Z Brassica rapa HOM05D003606 ORTHO05D004650 1.2e-20 104.4 113 59.3
TAR636G2756 Trochodendron aralioides HOM05D003606 ORTHO05D004650 1.6e-20 104.0 50 90.0
COL.COLO4_24393 Corchorus olitorius HOM05D003606 ORTHO05D004650 2.1e-20 103.6 51 88.2
MD02G1305600 Malus domestica HOM05D003606 ORTHO05D004650 3.5e-20 102.8 293 34.8
Oeu060950.1 Olea europaea HOM05D003606 ORTHO05D016710 4.6e-20 102.4 151 41.1
SMO259G0032 Selaginella moellendorffii HOM05D003606 ORTHO05D004650 1.7e-19 100.5 312 26.6
BcaC06g33525 Brassica carinata HOM05D003606 ORTHO05D004650 5.1e-19 99.0 76 61.8
BcaNung04664 Brassica carinata HOM05D003606 ORTHO05D004650 5.1e-19 99.0 76 61.8
Aqoxy2G00153 Aquilegia oxysepala HOM05D003606 ORTHO05D004650 1.5e-18 97.4 66 72.7
PSO541G4704 Papaver somniferum HOM05D003606 ORTHO05D004650 1.5e-18 97.4 180 42.8
C07p48580 Brassica napus HOM05D003606 ORTHO05D004650 1.9e-18 97.1 301 31.2
Eucgr.G03346 Eucalyptus grandis HOM05D003606 ORTHO05D004650 1.9e-18 97.1 51 82.4
BolC7t45366H Brassica oleracea HOM05D003606 ORTHO05D004650 2.5e-18 96.7 301 31.2
Thhalv10025051m.g Eutrema salsugineum HOM05D003606 ORTHO05D004650 2.1e-17 93.6 310 30.6
MCO05G213 Micromonas commoda HOM05D003606 ORTHO05D004650 2.8e-17 93.2 178 42.7
Pp3c1_35350 Physcomitrium patens HOM05D003606 ORTHO05D004650 3.6e-17 92.8 67 67.2
Hund00229 Selenicereus undatus HOM05D003606 ORTHO05D004650 3.6e-17 92.8 46 87.0
BraA10t45028Z Brassica rapa HOM05D003606 ORTHO05D004650 1.1e-16 91.3 72 62.5
Mapoly0082s0085 Marchantia polymorpha HOM05D003606 ORTHO05D004650 2.4e-16 90.1 66 62.1
Hund00228 Selenicereus undatus HOM05D003606 ORTHO05D004650 2.4e-16 90.1 175 40.6
Eucgr.G03354 Eucalyptus grandis HOM05D003606 ORTHO05D004650 6.9e-16 88.6 51 76.5
PRCOL_00003575 Prasinoderma coloniale HOM05D003606 ORTHO05D004650 1.2e-15 87.8 320 30.3
Oeu060951.1 Olea europaea HOM05D003606 ORTHO05D004650 1.5e-15 87.4 45 84.4
Haze_26363 Corylus avellana HOM05D003606 ORTHO05D004650 3.8e-14 82.8 177 38.4
BcaC06g32566 Brassica carinata HOM05D003606 ORTHO05D004650 6.4e-14 82.0 224 30.4
BcaNung05838 Brassica carinata HOM05D003606 ORTHO05D004650 8.4e-14 81.6 223 31.4
BcaNung04851 Brassica carinata HOM05D003606 ORTHO05D004650 1.1e-13 81.3 68 58.8
BraA10t45027Z Brassica rapa HOM05D003606 ORTHO05D004650 2.4e-13 80.1 163 42.3
TPR.G8471 Trifolium pratense HOM05D003606 ORTHO05D004650 9.3e-13 78.2 49 73.5
COL.COLO4_04880 Corchorus olitorius HOM05D003606 ORTHO05D004650 1.6e-12 77.4 124 51.6
C03p42670 Brassica napus HOM05D003606 ORTHO05D016710 1.0e-11 74.7 89 41.6
C03p67300 Brassica napus HOM05D003606 ORTHO05D016710 1.0e-11 74.7 89 41.6
BolSC21t60295H Brassica oleracea HOM05D003606 ORTHO05D016710 1.0e-11 74.7 89 41.6
SMO259G0025 Selaginella moellendorffii HOM05D003606 ORTHO05D004650 1.0e-11 74.7 75 50.7
SGA_v2.0_scaffold90G27689 Striga asiatica HOM05D003606 ORTHO05D004650 1.0e-11 74.7 113 55.8
C02p14020 Brassica napus HOM05D003606 ORTHO05D016710 1.3e-11 74.3 89 40.4
Medtr0421s0030 Medicago truncatula HOM05D003606 ORTHO05D004650 3.9e-11 72.8 199 28.1
BolC2t06237H Brassica oleracea HOM05D003606 ORTHO05D016710 6.7e-11 72.0 89 40.4
BcaC01g02187 Brassica carinata HOM05D003606 ORTHO05D016710 8.7e-11 71.6 114 49.1
Cre01.g000600 Chlamydomonas reinhardtii HOM05D003606 ORTHO05D004650 5.6e-10 68.9 64 56.2
MD09G1280600 Malus domestica HOM05D003606 ORTHO05D004650 9.6e-10 68.2 113 53.1
QL06p005538 Quercus lobata HOM05D003606 ORTHO05D004650 9.6e-10 68.2 113 51.3
CSS0038697 Camellia sinensis var. sinensis HOM05D003606 ORTHO05D016710 4.8e-09 65.9 30 86.7
Cfa026891 Carpinus fangiana HOM05D003606 ORTHO05D004650 9.0e-08 61.6 58 56.9
SMO364G0112 Selaginella moellendorffii HOM05D004962 ORTHO05D006249 3.8e-06 56.2 120 28.3
CSS0016432 Camellia sinensis var. sinensis HOM05D043631 ORTHO05D108967 4.9e-06 55.8 74 43.2
CSS0038500 Camellia sinensis var. sinensis HOM05D043631 ORTHO05D016710 4.9e-06 55.8 74 43.2


User provided reference genes

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