Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G2733 Salvia bowleyana HOM05D002407 ORTHO05D002476 3.0e-255 884.8 489 100.0
Migut.D00304 Erythranthe guttata HOM05D002407 ORTHO05D002476 9.5e-108 394.8 423 63.4
MSTRG.18236 Avicennia marina HOM05D002407 ORTHO05D002476 2.1e-99 367.1 420 56.9
MSTRG.21555 Avicennia marina HOM05D002407 ORTHO05D002476 5.6e-84 315.8 376 55.6
unitig_8.g3722 Utricularia gibba HOM05D002407 ORTHO05D002476 4.4e-52 209.9 391 43.5
Atru.chr5.1448 Acer truncatum HOM05D002407 ORTHO05D002476 2.7e-30 137.5 484 31.8
Thecc.01G277700 Theobroma cacao HOM05D002407 ORTHO05D002476 3.6e-30 137.1 449 37.4
Duzib133G0624 Durio zibethinus HOM05D002407 ORTHO05D002476 1.8e-26 124.8 466 32.0
Ciclev10018523m.g Citrus clementina HOM05D002407 ORTHO05D002476 2.7e-25 120.9 455 34.5
Cfa006148 Carpinus fangiana HOM05D002407 ORTHO05D002476 4.5e-25 120.2 411 36.3
TAR633G0416 Trochodendron aralioides HOM05D002407 ORTHO05D002476 4.5e-25 120.2 471 32.7
Potri.002G052300 Populus trichocarpa HOM05D002407 ORTHO05D002476 3.8e-24 117.1 462 31.4
Duzib138G1894 Durio zibethinus HOM05D002407 ORTHO05D002476 6.5e-24 116.3 455 32.3
TAR636G3152 Trochodendron aralioides HOM05D002407 ORTHO05D002476 2.1e-22 111.3 475 33.1
Potri.005G210200 Populus trichocarpa HOM05D002407 ORTHO05D002476 4.7e-22 110.2 459 30.5
Gorai.008G004200 Gossypium raimondii HOM05D002407 ORTHO05D002476 1.4e-21 108.6 454 32.4
Gohir.D12G004400 Gossypium hirsutum HOM05D002407 ORTHO05D002476 1.8e-21 108.2 452 32.7
COL.COLO4_09085 Corchorus olitorius HOM05D002407 ORTHO05D002476 9.8e-20 102.4 426 32.4
Nn1g02265 Nelumbo nucifera HOM05D002407 ORTHO05D002476 6.3e-19 99.8 509 31.2
Gohir.A12G004800 Gossypium hirsutum HOM05D002407 ORTHO05D002476 1.1e-18 99.0 452 33.2
MELO3C015830.2 Cucumis melo HOM05D002407 ORTHO05D002476 4.1e-18 97.1 462 30.5
Sabra02G0042400 Salix brachista HOM05D002407 ORTHO05D002476 5.4e-18 96.7 470 27.7
GSVIVG01017938001 Vitis vinifera HOM05D002407 ORTHO05D002476 5.9e-17 93.2 321 38.6
GSVIVG01001149001 Vitis vinifera HOM05D002407 ORTHO05D002476 7.8e-17 92.8 476 29.6
Sc25g0004400 Simmondsia chinensis HOM05D002407 ORTHO05D002476 1.7e-16 91.7 470 32.8
TAR362G1005 Trochodendron aralioides HOM05D002407 ORTHO05D002476 2.3e-16 91.3 509 29.5
THA.LOC104805011 Tarenaya hassleriana HOM05D002407 ORTHO05D002476 6.6e-16 89.7 415 30.4
CiPaw.02G096000 Carya illinoinensis HOM05D002407 ORTHO05D002476 8.6e-16 89.4 267 40.1
Sabra05G0160300 Salix brachista HOM05D002407 ORTHO05D002476 8.6e-16 89.4 331 30.5
ClCG09G007080 Citrullus lanatus HOM05D002407 ORTHO05D002476 1.1e-15 89.0 442 32.1
VMungo0720G1158 Vigna mungo HOM05D002407 ORTHO05D002476 1.1e-15 89.0 437 30.9
Nn4g26275 Nelumbo nucifera HOM05D002407 ORTHO05D002476 2.5e-15 87.8 278 37.4
CsaV3_7G028090 Cucumis sativus L. HOM05D002407 ORTHO05D002476 5.6e-15 86.7 450 32.2
CiPaw.01G164400 Carya illinoinensis HOM05D002407 ORTHO05D002476 9.5e-15 85.9 267 40.1
Phvul.007G055400 Phaseolus vulgaris HOM05D002407 ORTHO05D002476 2.1e-14 84.7 433 31.6
Haze_00920 Corylus avellana HOM05D002407 ORTHO05D002476 4.7e-14 83.6 512 31.4
arahy.Tifrunner.gnm1.ann1.C339P9 Arachis hypogaea HOM05D002407 ORTHO05D002476 6.1e-14 83.2 299 34.1
SGA_v2.0_scaffold138G35334 Striga asiatica HOM05D002407 ORTHO05D002476 1.8e-13 81.6 79 59.5
Sc13g0004300 Simmondsia chinensis HOM05D002407 ORTHO05D002476 2.3e-13 81.3 304 35.2
MBI04_g44890_MAGBIO Magnolia biondii HOM05D002407 ORTHO05D002476 3.0e-13 80.9 266 41.7
Sp5g00350 Schrenkiella parvula HOM05D002407 ORTHO05D002476 3.0e-13 80.9 416 28.1
Aa31LG10G17010 Aethionema arabicum HOM05D002407 ORTHO05D002476 6.8e-13 79.7 429 29.4
Sabra10G0053600 Salix brachista HOM05D002407 ORTHO05D002476 6.8e-13 79.7 257 36.2
HPP92_024476 Vanilla planifolia HOM05D002407 ORTHO05D002476 6.8e-13 79.7 301 36.9
Sed0012197 Sechium edule HOM05D002407 ORTHO05D002476 8.9e-13 79.3 463 28.9
SGA_v2.0_scaffold1G00485 Striga asiatica HOM05D002407 ORTHO05D002476 1.5e-12 78.6 87 54.0
THA.LOC104802231 Tarenaya hassleriana HOM05D002407 ORTHO05D002476 1.5e-12 78.6 403 30.5
Haze_04701 Corylus avellana HOM05D002407 ORTHO05D002476 2.6e-12 77.8 415 32.0
TWI09G0219 Tripterygium wilfordii HOM05D002407 ORTHO05D002476 2.6e-12 77.8 332 33.1
Glyma.20G144400 Glycine max HOM05D002407 ORTHO05D002476 3.4e-12 77.4 371 31.3
Lj5g0016334 Lotus japonicus HOM05D002407 ORTHO05D002476 3.4e-12 77.4 267 39.0
Sed0021914 Sechium edule HOM05D002407 ORTHO05D002476 4.4e-12 77.0 267 37.5
MD16G1191200 Malus domestica HOM05D002407 ORTHO05D002476 5.7e-12 76.6 279 36.2
HPP92_027912 Vanilla planifolia HOM05D002407 ORTHO05D002476 5.7e-12 76.6 304 36.5
PSO832G2586 Papaver somniferum HOM05D002407 ORTHO05D002476 7.5e-12 76.3 369 26.8
TWI73G0052 Tripterygium wilfordii HOM05D002407 ORTHO05D002476 7.5e-12 76.3 332 33.4
ClCG06G006080 Citrullus lanatus HOM05D002407 ORTHO05D002476 1.3e-11 75.5 444 29.7
MELO3C014484.2 Cucumis melo HOM05D002407 ORTHO05D002476 1.7e-11 75.1 270 36.3
CsaV3_6G038190 Cucumis sativus L. HOM05D002407 ORTHO05D002476 1.7e-11 75.1 270 36.3
QL06p003139 Quercus lobata HOM05D002407 ORTHO05D002476 1.7e-11 75.1 289 36.0
Prupe.1G011200 Prunus persica HOM05D002407 ORTHO05D002476 3.7e-11 73.9 288 35.8
Sed0008106 Sechium edule HOM05D002407 ORTHO05D002476 3.7e-11 73.9 435 29.9
Potri.010G089700 Populus trichocarpa HOM05D002407 ORTHO05D002476 4.9e-11 73.6 296 32.4
AUR62038105 Chenopodium quinoa HOM05D002407 ORTHO05D002476 6.4e-11 73.2 461 30.6
SHI00424 Sapria himalayana HOM05D002407 ORTHO05D002476 8.3e-11 72.8 253 35.6
unitig_748.g8339 Utricularia gibba HOM05D002407 ORTHO05D002476 1.1e-10 72.4 484 26.7
Ah.13g073870 Amaranthus hybridus HOM05D002407 ORTHO05D002476 2.4e-10 71.2 283 38.2
Prupe.8G240200 Prunus persica HOM05D002407 ORTHO05D002476 2.4e-10 71.2 264 28.8
VMungo0720G2301 Vigna mungo HOM05D002407 ORTHO05D002476 4.1e-10 70.5 401 27.9
BraA03t13421Z Brassica rapa HOM05D002407 ORTHO05D002476 5.4e-10 70.1 418 27.3
Glyma.10G249300 Glycine max HOM05D002407 ORTHO05D002476 5.4e-10 70.1 369 31.7
A03p42740 Brassica napus HOM05D002407 ORTHO05D002476 7.0e-10 69.7 418 27.3
Rhsim02G0022900 Rhododendron simsii HOM05D002407 ORTHO05D002476 9.2e-10 69.3 496 29.4
Potri.008G151200 Populus trichocarpa HOM05D002407 ORTHO05D002476 1.2e-09 68.9 292 33.6
Hund12142 Selenicereus undatus HOM05D002407 ORTHO05D002476 1.2e-09 68.9 301 36.2
QL12p021604 Quercus lobata HOM05D002407 ORTHO05D002476 1.6e-09 68.6 427 31.1
RcHm_v2.0_Chr6g0290961 Rosa chinensis HOM05D002407 ORTHO05D002476 1.6e-09 68.6 240 27.5
Gorai.011G169000 Gossypium raimondii HOM05D002407 ORTHO05D002476 4.6e-09 67.0 304 33.9
Eucgr.H03537 Eucalyptus grandis HOM05D002407 ORTHO05D002476 5.9e-09 66.6 279 36.2
Sabra08G0115000 Salix brachista HOM05D002407 ORTHO05D002476 5.9e-09 66.6 289 33.2
MD13G1190800 Malus domestica HOM05D002407 ORTHO05D002476 7.8e-09 66.2 280 36.1
Actinidia36978 Actinidia chinensis HOM05D002407 ORTHO05D002476 1.0e-08 65.9 467 30.4
Ca_09753_v3 Cicer arietinum L. HOM05D002407 ORTHO05D002476 1.3e-08 65.5 398 27.6
FAN12G3852 Fragaria x ananassa HOM05D002407 ORTHO05D002476 1.3e-08 65.5 280 36.4
AL7G40870 Arabidopsis lyrata HOM05D002407 ORTHO05D002476 1.7e-08 65.1 430 31.2
Manes.15G027400 Manihot esculenta HOM05D002407 ORTHO05D002476 2.3e-08 64.7 298 34.6
Glyma.10G027000 Glycine max HOM05D002407 ORTHO05D002476 3.9e-08 63.9 239 31.8
Lj6C594G25 Lonicera japonica HOM05D002407 ORTHO05D002476 3.9e-08 63.9 457 25.6
Manes.15G026500 Manihot esculenta HOM05D002407 ORTHO05D002476 5.0e-08 63.5 347 32.3
TWI53G2093 Tripterygium wilfordii HOM05D002407 ORTHO05D002476 5.0e-08 63.5 336 32.1
A04p00230 Brassica napus HOM05D002407 ORTHO05D002476 6.6e-08 63.2 285 27.4
Ca_10916_v3 Cicer arietinum L. HOM05D002407 ORTHO05D002476 6.6e-08 63.2 190 44.2
MD03G1263800 Malus domestica HOM05D002407 ORTHO05D002476 6.6e-08 63.2 257 30.0
RcHm_v2.0_Chr4g0416621 Rosa chinensis HOM05D002407 ORTHO05D002476 6.6e-08 63.2 473 29.8
Duzib052G1002 Durio zibethinus HOM05D002407 ORTHO05D002476 8.6e-08 62.8 362 29.3
Actinidia08503 Actinidia chinensis HOM05D002407 ORTHO05D002476 1.1e-07 62.4 296 33.1
Carub.0005s2985 Capsella rubella HOM05D002407 ORTHO05D002476 1.9e-07 61.6 255 30.6
Dinv38434 Davidia involucrata HOM05D002407 ORTHO05D002476 1.9e-07 61.6 171 32.2
Dinv44512 Davidia involucrata HOM05D002407 ORTHO05D002476 1.9e-07 61.6 262 35.9
FAN24G1830 Fragaria x ananassa HOM05D002407 ORTHO05D002476 1.9e-07 61.6 243 24.3
THA.LOC104808535 Tarenaya hassleriana HOM05D002407 ORTHO05D002476 1.9e-07 61.6 310 34.8
TAR365G0729 Trochodendron aralioides HOM05D002407 ORTHO05D002476 1.9e-07 61.6 106 40.6
FvH4_2g23490 Fragaria vesca HOM05D002407 ORTHO05D002476 2.5e-07 61.2 243 24.3
HPP92_024870 Vanilla planifolia HOM05D002407 ORTHO05D002476 2.5e-07 61.2 248 31.9
COL.COLO4_10231 Corchorus olitorius HOM05D002407 ORTHO05D002476 3.3e-07 60.8 164 31.1
Gohir.A10G117100 Gossypium hirsutum HOM05D002407 ORTHO05D002476 3.3e-07 60.8 452 28.5
AT3G63180 Arabidopsis thaliana HOM05D002407 ORTHO05D002476 4.3e-07 60.5 240 30.8
BcaC05g28079 Brassica carinata HOM05D002407 ORTHO05D002476 4.3e-07 60.5 494 29.4
BcaC09g49170 Brassica carinata HOM05D002407 ORTHO05D002476 4.3e-07 60.5 273 34.8
C05p41010 Brassica napus HOM05D002407 ORTHO05D002476 4.3e-07 60.5 494 29.4
BolC1t04147H Brassica oleracea HOM05D002407 ORTHO05D002476 4.3e-07 60.5 273 34.8
BolC5t32844H Brassica oleracea HOM05D002407 ORTHO05D002476 4.3e-07 60.5 494 29.4
Cpa.g.sc52.41 Carica papaya HOM05D002407 ORTHO05D002476 4.3e-07 60.5 409 25.7
Duzib212G0865 Durio zibethinus HOM05D002407 ORTHO05D002476 7.3e-07 59.7 347 25.4
C01p41910 Brassica napus HOM05D002407 ORTHO05D002476 9.5e-07 59.3 272 34.6
BraA04t15742Z Brassica rapa HOM05D002407 ORTHO05D002476 1.2e-06 58.9 285 27.0
ECA234G2398 Erigeron canadensis HOM05D002407 ORTHO05D002476 1.2e-06 58.9 132 35.6
Carub.0007s2714 Capsella rubella HOM05D002407 ORTHO05D002476 2.1e-06 58.2 445 26.7
Ciclev10004136m.g Citrus clementina HOM05D002407 ORTHO05D002476 2.1e-06 58.2 315 31.4
Glyma.02G146900 Glycine max HOM05D002407 ORTHO05D002476 2.1e-06 58.2 406 26.6
Psat6g208200 Pisum sativum HOM05D002407 ORTHO05D002476 2.1e-06 58.2 389 30.3
THA.LOC104803022 Tarenaya hassleriana HOM05D002407 ORTHO05D002476 6.2e-06 56.6 310 32.6
vmacro15329 Vaccinium macrocarpon HOM05D002407 ORTHO05D002476 6.2e-06 56.6 501 29.5
Actinidia23483 Actinidia chinensis HOM05D002407 ORTHO05D002476 8.0e-06 56.2 197 40.6
FvH4_4g15230 Fragaria vesca HOM05D002407 ORTHO05D002476 8.0e-06 56.2 281 34.5
FAN20G2514 Fragaria x ananassa HOM05D002407 ORTHO05D002476 8.0e-06 56.2 244 26.6
SGA_v2.0_scaffold191G40497 Striga asiatica HOM05D002407 ORTHO05D002476 8.0e-06 56.2 118 41.5


User provided reference genes

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