Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G2715 Salvia bowleyana HOM05D000653 ORTHO05D043236 3.0e-49 198.4 112 100.0
SalBow4G2996 Salvia bowleyana HOM05D000653 ORTHO05D002177 2.0e-29 132.5 74 90.5
SalBow5G0679 Salvia bowleyana HOM05D004633 ORTHO05D005503 6.3e-23 110.9 61 86.9
Migut.A00364 Erythranthe guttata HOM05D000653 ORTHO05D002177 1.0e-17 93.6 72 62.5
SGA_v2.0_scaffold147G36348 Striga asiatica HOM05D000653 ORTHO05D002177 2.0e-16 89.4 72 56.9
Oeu009656.1 Olea europaea HOM05D000653 ORTHO05D002177 1.7e-15 86.3 72 56.9
Oeu001633.1 Olea europaea HOM05D000653 ORTHO05D002177 1.4e-14 83.2 72 56.9
MSTRG.25826 Avicennia marina HOM05D000653 ORTHO05D002177 5.3e-14 81.3 72 54.2
Glyma.17G218400 Glycine max HOM05D000653 ORTHO05D002177 5.3e-14 81.3 72 52.8
Dinv10286 Davidia involucrata HOM05D000653 ORTHO05D002177 9.1e-14 80.5 72 51.4
Medtr1g014250 Medicago truncatula HOM05D000653 ORTHO05D002177 1.2e-13 80.1 72 51.4
Cc08_g07500 Coffea canephora HOM05D000653 ORTHO05D002177 1.6e-13 79.7 72 51.4
TPR.G38881 Trifolium pratense HOM05D000653 ORTHO05D002177 1.6e-13 79.7 72 51.4
Nitab4.5_0001362g0060 Nicotiana tabacum HOM05D000653 ORTHO05D002177 2.0e-13 79.3 72 55.6
Glyma.14G108700 Glycine max HOM05D000653 ORTHO05D002177 2.7e-13 79.0 64 56.2
Nitab4.5_0000264g0100 Nicotiana tabacum HOM05D000653 ORTHO05D002177 3.5e-13 78.6 72 54.2
Phvul.001G045500 Phaseolus vulgaris HOM05D000653 ORTHO05D002177 5.9e-13 77.8 45 68.9
Lj5g0017563 Lotus japonicus HOM05D000653 ORTHO05D002177 7.7e-13 77.4 70 47.1
Psat6g026520 Pisum sativum HOM05D000653 ORTHO05D002177 7.7e-13 77.4 72 48.6
CiPaw.07G231600 Carya illinoinensis HOM05D000653 ORTHO05D002177 2.2e-12 75.9 72 52.8
arahy.Tifrunner.gnm1.ann1.JTFI54 Arachis hypogaea HOM05D000653 ORTHO05D002177 2.9e-12 75.5 60 55.0
arahy.Tifrunner.gnm1.ann1.L8CG94 Arachis hypogaea HOM05D000653 ORTHO05D002177 2.9e-12 75.5 60 55.0
Lj7C736T9 Lonicera japonica HOM05D000653 ORTHO05D002177 3.8e-12 75.1 72 51.4
CAN.G906.8 Capsicum annuum HOM05D000653 ORTHO05D002177 5.0e-12 74.7 80 48.8
arahy.Tifrunner.gnm1.ann1.MB389E Arachis hypogaea HOM05D000653 ORTHO05D002177 6.5e-12 74.3 73 52.1
arahy.Tifrunner.gnm1.ann1.PC02MH Arachis hypogaea HOM05D000653 ORTHO05D002177 6.5e-12 74.3 73 52.1
GSVIVG01035987001 Vitis vinifera HOM05D000653 ORTHO05D002177 8.5e-12 73.9 70 52.9
Dinv18467 Davidia involucrata HOM05D000653 ORTHO05D002177 1.1e-11 73.6 66 54.5
Rhsim02G0216300 Rhododendron simsii HOM05D000653 ORTHO05D002177 1.1e-11 73.6 72 51.4
Haze_21387 Corylus avellana HOM05D000653 ORTHO05D002177 1.9e-11 72.8 66 54.5
Lalb_Chr23g0268171 Lupinus albus HOM05D000653 ORTHO05D002177 2.5e-11 72.4 72 47.2
TAR625G0073 Trochodendron aralioides HOM05D000653 ORTHO05D002177 2.5e-11 72.4 70 51.4
CSS0026345 Camellia sinensis var. sinensis HOM05D000653 ORTHO05D002177 5.5e-11 71.2 72 48.6
Cpa.g.sc148.34 Carica papaya HOM05D000653 ORTHO05D002177 7.2e-11 70.9 72 50.0
VMungo0647G1114 Vigna mungo HOM05D000653 ORTHO05D002177 9.4e-11 70.5 63 50.8
QL02p018511 Quercus lobata HOM05D000653 ORTHO05D002177 1.6e-10 69.7 40 72.5
PGSC0003DMG400026303 Solanum tuberosum HOM05D000653 ORTHO05D002177 1.6e-10 69.7 79 50.6
EL10Ac2g02485 Beta vulgaris HOM05D000653 ORTHO05D002177 2.1e-10 69.3 72 50.0
PSO063G0417 Papaver somniferum HOM05D000653 ORTHO05D002177 2.1e-10 69.3 70 48.6
Potri.006G266000 Populus trichocarpa HOM05D000653 ORTHO05D002177 2.1e-10 69.3 72 47.2
BcaB07g29933 Brassica carinata HOM05D000653 ORTHO05D002177 2.7e-10 68.9 44 63.6
Manes.16G131200 Manihot esculenta HOM05D000653 ORTHO05D002177 2.7e-10 68.9 61 52.5
Sed0023097 Sechium edule HOM05D000653 ORTHO05D002177 4.7e-10 68.2 68 50.0
Solyc08g006680.3 Solanum lycopersicum HOM05D000653 ORTHO05D002177 4.7e-10 68.2 40 75.0
Sopen08g002630 Solanum pennellii HOM05D000653 ORTHO05D002177 4.7e-10 68.2 40 75.0
TWI34G0838 Tripterygium wilfordii HOM05D000653 ORTHO05D002177 4.7e-10 68.2 55 60.0
Carub.0006s2288 Capsella rubella HOM05D000653 ORTHO05D002177 6.1e-10 67.8 44 65.9
AUR62024792 Chenopodium quinoa HOM05D000653 ORTHO05D002177 6.1e-10 67.8 44 68.2
AUR62032428 Chenopodium quinoa HOM05D000653 ORTHO05D002177 6.1e-10 67.8 44 68.2
C02p59860 Brassica napus HOM05D000653 ORTHO05D002177 8.0e-10 67.4 44 61.4
BolC2t12044H Brassica oleracea HOM05D000653 ORTHO05D002177 8.0e-10 67.4 44 61.4
Lj1g0025481 Lotus japonicus HOM05D000653 ORTHO05D002177 8.0e-10 67.4 37 73.0
TAR636G2553 Trochodendron aralioides HOM05D000653 ORTHO05D002177 8.0e-10 67.4 49 57.1
Ciclev10008084m.g Citrus clementina HOM05D000653 ORTHO05D002177 1.0e-09 67.0 67 55.2
Nn2g12454 Nelumbo nucifera HOM05D000653 ORTHO05D002177 1.0e-09 67.0 48 56.2
Sabra18G0020500 Salix brachista HOM05D000653 ORTHO05D002177 1.0e-09 67.0 41 70.7
Ah.10g025700 Amaranthus hybridus HOM05D000653 ORTHO05D002177 1.4e-09 66.6 39 76.9
AL6G36680 Arabidopsis lyrata HOM05D000653 ORTHO05D002177 1.4e-09 66.6 44 63.6
AT5G25050 Arabidopsis thaliana HOM05D000653 ORTHO05D002177 1.4e-09 66.6 44 63.6
A02p39980 Brassica napus HOM05D000653 ORTHO05D002177 1.4e-09 66.6 44 59.1
DCAR_003015 Daucus carota HOM05D000653 ORTHO05D002177 1.4e-09 66.6 71 50.7
TWI63G0004 Tripterygium wilfordii HOM05D000653 ORTHO05D002177 1.4e-09 66.6 55 58.2
Gohir.A05G060700 Gossypium hirsutum HOM05D000653 ORTHO05D002177 1.8e-09 66.2 41 68.3
Gorai.009G063900 Gossypium raimondii HOM05D000653 ORTHO05D002177 1.8e-09 66.2 41 68.3
MD08G1053000 Malus domestica HOM05D000653 ORTHO05D002177 1.8e-09 66.2 70 51.4
Atru.chr7.2548 Acer truncatum HOM05D000653 ORTHO05D002177 2.3e-09 65.9 41 68.3
Ah.10g029570 Amaranthus hybridus HOM05D000653 ORTHO05D002177 2.3e-09 65.9 38 78.9
A06p35800 Brassica napus HOM05D000653 ORTHO05D002177 2.3e-09 65.9 44 63.6
C07p42750 Brassica napus HOM05D000653 ORTHO05D002177 2.3e-09 65.9 44 63.6
BolC7t44805H Brassica oleracea HOM05D000653 ORTHO05D002177 2.3e-09 65.9 44 63.6
BraA06t26505Z Brassica rapa HOM05D000653 ORTHO05D002177 2.3e-09 65.9 44 63.6
MD08G1053100 Malus domestica HOM05D000653 ORTHO05D002177 2.3e-09 65.9 70 47.1
Prupe.1G395900 Prunus persica HOM05D000653 ORTHO05D002177 2.3e-09 65.9 70 45.7
Thecc.09G014100 Theobroma cacao HOM05D000653 ORTHO05D002177 2.3e-09 65.9 41 73.2
unitig_32.g10934 Utricularia gibba HOM05D000653 ORTHO05D002177 2.3e-09 65.9 72 44.4
Duzib187G1169 Durio zibethinus HOM05D000653 ORTHO05D002177 3.0e-09 65.5 41 70.7
Potri.018G017100 Populus trichocarpa HOM05D000653 ORTHO05D002177 3.0e-09 65.5 41 65.9
Thecc.09G014000 Theobroma cacao HOM05D000653 ORTHO05D002177 3.0e-09 65.5 41 70.7
Zm00001eb374450 Zea mays HOM05D000653 ORTHO05D002177 3.0e-09 65.5 36 77.8
COL.COLO4_18965 Corchorus olitorius HOM05D000653 ORTHO05D002177 4.0e-09 65.1 41 65.9
Thhalv10004061m.g Eutrema salsugineum HOM05D000653 ORTHO05D002177 4.0e-09 65.1 44 65.9
FAN15G0083 Fragaria x ananassa HOM05D000653 ORTHO05D002177 4.0e-09 65.1 59 52.5
Sc09g0010740 Simmondsia chinensis HOM05D000653 ORTHO05D002177 4.0e-09 65.1 35 71.4
FAN27G0031 Fragaria x ananassa HOM05D000653 ORTHO05D002177 5.2e-09 64.7 39 69.2
RcHm_v2.0_Chr6g0299271 Rosa chinensis HOM05D000653 ORTHO05D002177 5.2e-09 64.7 39 69.2
Cfa001854 Carpinus fangiana HOM05D000653 ORTHO05D002177 6.8e-09 64.3 41 65.9
Eucgr.C01892 Eucalyptus grandis HOM05D000653 ORTHO05D002177 6.8e-09 64.3 62 46.8
Eucgr.C01893 Eucalyptus grandis HOM05D000653 ORTHO05D002177 6.8e-09 64.3 46 60.9
Gohir.A05G060600 Gossypium hirsutum HOM05D000653 ORTHO05D002177 6.8e-09 64.3 45 62.2
Gohir.D05G062750 Gossypium hirsutum HOM05D000653 ORTHO05D002177 6.8e-09 64.3 45 62.2
Gorai.009G063800 Gossypium raimondii HOM05D000653 ORTHO05D002177 6.8e-09 64.3 45 62.2
CiPaw.02G163700 Carya illinoinensis HOM05D000653 ORTHO05D002177 8.8e-09 63.9 41 65.9
DCAR_003014 Daucus carota HOM05D000653 ORTHO05D002177 8.8e-09 63.9 41 65.9
Duzib168G0857 Durio zibethinus HOM05D000653 ORTHO05D002177 8.8e-09 63.9 38 68.4
PGR142G1100 Punica granatum HOM05D000653 ORTHO05D002177 8.8e-09 63.9 61 44.3
CARHR188440 Cardamine hirsuta HOM05D000653 ORTHO05D002177 1.2e-08 63.5 44 63.6
COL.COLO4_18964 Corchorus olitorius HOM05D000653 ORTHO05D002177 1.2e-08 63.5 37 75.7
MELO3C011307.2 Cucumis melo HOM05D000653 ORTHO05D002177 1.2e-08 63.5 68 50.0
vmacro11268 Vaccinium macrocarpon HOM05D000653 ORTHO05D002177 1.2e-08 63.5 72 44.4
BcaC03g17927 Brassica carinata HOM05D000653 ORTHO05D002177 1.5e-08 63.2 44 59.1
Haze_16701 Corylus avellana HOM05D000653 ORTHO05D043771 1.5e-08 63.2 41 63.4
FvH4_2g41231 Fragaria vesca HOM05D000653 ORTHO05D002177 1.5e-08 63.2 39 66.7
CsaV3_2G032540 Cucumis sativus L. HOM05D000653 ORTHO05D002177 2.0e-08 62.8 68 48.5
RcHm_v2.0_Chr2g0132271 Rosa chinensis HOM05D000653 ORTHO05D002177 2.0e-08 62.8 42 61.9
Carub.0006s2287 Capsella rubella HOM05D000653 ORTHO05D002177 2.6e-08 62.4 44 56.8
Sp2g22470 Schrenkiella parvula HOM05D000653 ORTHO05D002177 2.6e-08 62.4 44 59.1
Aqoxy7G03326 Aquilegia oxysepala HOM05D000653 ORTHO05D002177 3.4e-08 62.0 35 68.6
ClCG08G013760 Citrullus lanatus HOM05D000653 ORTHO05D002177 3.4e-08 62.0 68 48.5
Hund25614 Selenicereus undatus HOM05D000653 ORTHO05D002177 3.4e-08 62.0 72 44.4
MBI14_g31378_MAGBIO Magnolia biondii HOM05D000653 ORTHO05D002177 4.4e-08 61.6 66 43.9
FvH4_6g28210 Fragaria vesca HOM05D000653 ORTHO05D002177 5.7e-08 61.2 42 59.5
FAN14G3663 Fragaria x ananassa HOM05D000653 ORTHO05D002177 5.7e-08 61.2 42 59.5
Os06g0186700 Oryza sativa ssp. japonica HOM05D000653 ORTHO05D002177 5.7e-08 61.2 67 50.7
CDE02G4702 Ceratophyllum demersum HOM05D000653 ORTHO05D002177 7.5e-08 60.8 40 60.0
THA.LOC104814984 Tarenaya hassleriana HOM05D000653 ORTHO05D002177 7.5e-08 60.8 47 55.3
ATR0580G120 Amborella trichopoda HOM05D000653 ORTHO05D002177 9.8e-08 60.5 40 70.0
SHI21084 Sapria himalayana HOM05D000653 ORTHO05D002177 9.8e-08 60.5 59 47.5
Aa31LG11G4290 Aethionema arabicum HOM05D000653 ORTHO05D002177 1.3e-07 60.1 34 73.5
Nitab4.5_0002700g0040 Nicotiana tabacum HOM05D000653 ORTHO05D002177 1.3e-07 60.1 69 42.0
Oeu003119.2 Olea europaea HOM05D000653 ORTHO05D002177 1.7e-07 59.7 69 40.6
PSO063G2389 Papaver somniferum HOM05D000653 ORTHO05D002177 1.7e-07 59.7 38 60.5
PSO782G0024 Papaver somniferum HOM05D000653 ORTHO05D002177 1.7e-07 59.7 38 60.5
FAN05G3751 Fragaria x ananassa HOM05D000653 ORTHO05D002177 2.8e-07 58.9 42 57.1
FAN09G2812 Fragaria x ananassa HOM05D000653 ORTHO05D002177 2.8e-07 58.9 42 57.1
HanXRQChr17g0536411 Helianthus annuus HOM05D000653 ORTHO05D002177 2.8e-07 58.9 39 64.1
MD17G1226600 Malus domestica HOM05D000653 ORTHO05D002177 2.8e-07 58.9 67 41.8
Nitab4.5_0004738g0020 Nicotiana tabacum HOM05D000653 ORTHO05D002177 3.7e-07 58.5 69 40.6
ECA246G0540 Erigeron canadensis HOM05D000653 ORTHO05D002177 4.8e-07 58.2 41 63.4
Prupe.3G104000 Prunus persica HOM05D000653 ORTHO05D002177 4.8e-07 58.2 39 66.7
Aa31LG4G1280 Aethionema arabicum HOM05D000653 ORTHO05D002177 6.3e-07 57.8 35 68.6
BcaC08g47530 Brassica carinata HOM05D000653 ORTHO05D002177 6.3e-07 57.8 39 61.5
C06p53540 Brassica napus HOM05D000653 ORTHO05D002177 6.3e-07 57.8 39 61.5
BolC6t40370H Brassica oleracea HOM05D000653 ORTHO05D002177 6.3e-07 57.8 39 61.5
CARHR073480 Cardamine hirsuta HOM05D000653 ORTHO05D002177 6.3e-07 57.8 60 48.3
A07p44720 Brassica napus HOM05D000653 ORTHO05D002177 8.3e-07 57.4 35 65.7
BraA07t31980Z Brassica rapa HOM05D000653 ORTHO05D002177 8.3e-07 57.4 35 65.7
AL2G40410 Arabidopsis lyrata HOM05D000653 ORTHO05D002177 1.1e-06 57.0 35 65.7
Ca_13059_v3 Cicer arietinum L. HOM05D000653 ORTHO05D002177 1.1e-06 57.0 32 78.1
AT1G79710 Arabidopsis thaliana HOM05D000653 ORTHO05D002177 1.4e-06 56.6 35 68.6
BcaB02g08708 Brassica carinata HOM05D000653 ORTHO05D002177 1.4e-06 56.6 35 65.7
BolC3t19095H Brassica oleracea HOM05D000653 ORTHO05D043236 1.4e-06 56.6 36 63.9
Carub.0002s2657 Capsella rubella HOM05D000653 ORTHO05D002177 1.4e-06 56.6 35 68.6
Duzib235G0213 Durio zibethinus HOM05D000653 ORTHO05D002177 1.8e-06 56.2 35 68.6
Sabra01G0028500 Salix brachista HOM05D000653 ORTHO05D002177 1.8e-06 56.2 51 51.0
AUR62033004 Chenopodium quinoa HOM05D000653 ORTHO05D002177 2.4e-06 55.8 69 44.9
Gohir.A05G117300 Gossypium hirsutum HOM05D000653 ORTHO05D002177 2.4e-06 55.8 35 65.7
Hma1.2p1_2083F.1_g313610 Hydrangea macrophylla HOM05D000653 ORTHO05D002177 2.4e-06 55.8 62 41.9
Thecc.06G047400 Theobroma cacao HOM05D000653 ORTHO05D002177 2.4e-06 55.8 35 68.6
AT5G25040 Arabidopsis thaliana HOM05D000653 ORTHO05D002177 5.4e-06 54.7 44 54.5
MD09G1228300 Malus domestica HOM05D000653 ORTHO05D002177 5.4e-06 54.7 67 40.3
THA.LOC104808170 Tarenaya hassleriana HOM05D000653 ORTHO05D002177 5.4e-06 54.7 35 68.6
Nn8g40039 Nelumbo nucifera HOM05D000653 ORTHO05D002177 7.0e-06 54.3 56 48.2
Peaxi162Scf00045g01939 Petunia axillaris HOM05D000653 ORTHO05D002177 7.0e-06 54.3 29 86.2
Peaxi162Scf00314g01028 Petunia axillaris HOM05D000653 ORTHO05D002177 7.0e-06 54.3 69 37.7
EL10Ac8g19406 Beta vulgaris HOM05D000653 ORTHO05D002177 9.1e-06 53.9 45 48.9
Hma1.2p1_2083F.1_g313596 Hydrangea macrophylla HOM05D000653 ORTHO05D002177 9.1e-06 53.9 30 66.7
Lsat_1_v5_gn_3_22800 Lactuca sativa HOM05D000653 ORTHO05D002177 9.1e-06 53.9 38 57.9
Pp3c25_9740 Physcomitrium patens HOM05D000653 ORTHO05D002177 9.1e-06 53.9 44 52.3


User provided reference genes

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