Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G2705 Salvia bowleyana HOM05D005304 ORTHO05D004438 9.0e-138 493.8 268 100.0
Migut.F01894 Erythranthe guttata HOM05D005304 ORTHO05D004438 6.3e-22 109.0 92 62.0
Oeu059829.1 Olea europaea HOM05D005304 ORTHO05D004438 1.3e-19 101.3 90 55.6
MSTRG.27507 Avicennia marina HOM05D005304 ORTHO05D004438 1.2e-17 94.7 95 56.8
MSTRG.9124 Avicennia marina HOM05D005304 ORTHO05D004438 2.1e-17 94.0 99 55.6
Oeu032435.1 Olea europaea HOM05D005304 ORTHO05D004438 1.0e-16 91.7 87 50.6
Rhsim03G0110900 Rhododendron simsii HOM05D005304 ORTHO05D004438 1.4e-16 91.3 106 50.0
CSS0003867 Camellia sinensis var. sinensis HOM05D017072 ORTHO05D004438 1.1e-15 88.2 100 52.0
SalBow6G1975 Salvia bowleyana HOM05D005304 ORTHO05D004438 1.3e-14 84.7 98 49.0
Lsat_1_v5_gn_8_22700 Lactuca sativa HOM05D005304 ORTHO05D004438 3.7e-14 83.2 100 48.0
Nitab4.5_0000107g0230 Nicotiana tabacum HOM05D005304 ORTHO05D004438 3.7e-14 83.2 96 53.1
TAR633G0523 Trochodendron aralioides HOM05D005304 ORTHO05D004438 6.3e-14 82.4 90 46.7
Sabra10G0179600 Salix brachista HOM05D005304 ORTHO05D004438 1.1e-13 81.6 100 46.0
Potri.008G029600 Populus trichocarpa HOM05D005304 ORTHO05D004438 1.4e-13 81.3 99 48.5
TAR636G3524 Trochodendron aralioides HOM05D005304 ORTHO05D004438 1.4e-13 81.3 86 41.9
Migut.F01597 Erythranthe guttata HOM05D005304 ORTHO05D004438 4.1e-13 79.7 97 49.5
Cc02_g10500 Coffea canephora HOM05D005304 ORTHO05D004438 6.9e-13 79.0 115 44.3
Sabra08G0019800 Salix brachista HOM05D005304 ORTHO05D004438 9.1e-13 78.6 100 49.0
Manes.07G093500 Manihot esculenta HOM05D005304 ORTHO05D004438 1.2e-12 78.2 99 45.5
Nitab4.5_0000593g0370 Nicotiana tabacum HOM05D005304 ORTHO05D004438 1.2e-12 78.2 89 46.1
DCAR_019059 Daucus carota HOM05D005304 ORTHO05D004438 1.5e-12 77.8 88 51.1
TAR623G1332 Trochodendron aralioides HOM05D005304 ORTHO05D004438 1.5e-12 77.8 97 43.3
Eucgr.J01033 Eucalyptus grandis HOM05D005304 ORTHO05D004438 2.6e-12 77.0 68 54.4
Potri.010G231600 Populus trichocarpa HOM05D005304 ORTHO05D004438 2.6e-12 77.0 101 45.5
Nn6g35176 Nelumbo nucifera HOM05D005304 ORTHO05D004438 7.7e-12 75.5 95 46.3
PGR044G1405 Punica granatum HOM05D005304 ORTHO05D004438 7.7e-12 75.5 69 53.6
Duzib114G0655 Durio zibethinus HOM05D005304 ORTHO05D004438 1.0e-11 75.1 105 41.0
TAR369G0323 Trochodendron aralioides HOM05D001401 ORTHO05D002222 1.3e-11 74.7 86 43.0
CAN.G612.11 Capsicum annuum HOM05D005304 ORTHO05D004438 1.7e-11 74.3 100 43.0
Duzib128G0830 Durio zibethinus HOM05D005304 ORTHO05D004438 2.9e-11 73.6 116 42.2
QL08p052941 Quercus lobata HOM05D005304 ORTHO05D004438 2.9e-11 73.6 53 60.4
Potri.010G231700 Populus trichocarpa HOM05D005304 ORTHO05D004438 6.5e-11 72.4 78 48.7
ClCG05G021460 Citrullus lanatus HOM05D005304 ORTHO05D004438 8.5e-11 72.0 84 42.9
Lsat_1_v5_gn_9_70641 Lactuca sativa HOM05D005304 ORTHO05D004438 8.5e-11 72.0 104 41.3
RcHm_v2.0_Chr1g0336411 Rosa chinensis HOM05D005304 ORTHO05D004438 8.5e-11 72.0 78 46.2
Solyc03g071710.1 Solanum lycopersicum HOM05D005304 ORTHO05D004438 1.1e-10 71.6 98 43.9
Sopen03g019970 Solanum pennellii HOM05D005304 ORTHO05D004438 1.1e-10 71.6 98 43.9
FAN10G0320 Fragaria x ananassa HOM05D005304 ORTHO05D004438 1.4e-10 71.2 59 57.6
Manes.10G053200 Manihot esculenta HOM05D005304 ORTHO05D004438 1.4e-10 71.2 101 47.5
FvH4_7g06790 Fragaria vesca HOM05D005304 ORTHO05D004438 1.9e-10 70.9 57 59.6
FAN03G1417 Fragaria x ananassa HOM05D005304 ORTHO05D004438 1.9e-10 70.9 82 48.8
FAN06G1004 Fragaria x ananassa HOM05D005304 ORTHO05D004438 1.9e-10 70.9 57 59.6
FAN10G3090 Fragaria x ananassa HOM05D005304 ORTHO05D004438 1.9e-10 70.9 57 59.6
CiPaw.01G264700 Carya illinoinensis HOM05D005304 ORTHO05D004438 2.5e-10 70.5 53 58.5
QL03p021677 Quercus lobata HOM05D005304 ORTHO05D004438 3.2e-10 70.1 63 49.2
Thecc.10G090600 Theobroma cacao HOM05D005304 ORTHO05D004438 3.2e-10 70.1 98 44.9
PGSC0003DMG400016914 Solanum tuberosum HOM05D005304 ORTHO05D004438 5.5e-10 69.3 90 45.6
Prupe.6G114400 Prunus persica HOM05D005304 ORTHO05D004438 7.2e-10 68.9 86 39.5
PGR044G0041 Punica granatum HOM05D005304 ORTHO05D004438 7.2e-10 68.9 75 46.7
QL03p011649 Quercus lobata HOM05D005304 ORTHO05D004438 2.1e-09 67.4 63 47.6
Aqoxy2G01602 Aquilegia oxysepala HOM05D005304 ORTHO05D004438 2.7e-09 67.0 99 37.4
CiPaw.02G169800 Carya illinoinensis HOM05D005304 ORTHO05D004438 2.7e-09 67.0 70 45.7
FAN01G2164 Fragaria x ananassa HOM05D005304 ORTHO05D004438 2.7e-09 67.0 82 47.6
FAN02G4580 Fragaria x ananassa HOM05D005304 ORTHO05D004438 2.7e-09 67.0 57 57.9
FAN12G4274 Fragaria x ananassa HOM05D005304 ORTHO05D004438 2.7e-09 67.0 57 57.9
MELO3C012381.2 Cucumis melo HOM05D005304 ORTHO05D004438 3.6e-09 66.6 53 54.7
CsaV3_5G035790 Cucumis sativus L. HOM05D005304 ORTHO05D004438 4.7e-09 66.2 53 54.7
Manes.10G053300 Manihot esculenta HOM05D005304 ORTHO05D004438 4.7e-09 66.2 100 43.0
CAN.G135.30 Capsicum annuum HOM05D021137 ORTHO05D004438 6.1e-09 65.9 71 45.1
Cfa001771 Carpinus fangiana HOM05D005304 ORTHO05D004438 6.1e-09 65.9 74 47.3
Duzib128G0918 Durio zibethinus HOM05D005304 ORTHO05D004438 7.9e-09 65.5 98 38.8
Duzib150G0717 Durio zibethinus HOM05D005304 ORTHO05D004438 7.9e-09 65.5 70 47.1
QL01p014739 Quercus lobata HOM05D005304 ORTHO05D004438 7.9e-09 65.5 77 45.5
Sed0010031 Sechium edule HOM05D005304 ORTHO05D004438 7.9e-09 65.5 107 40.2
Duzib168G0406 Durio zibethinus HOM05D005304 ORTHO05D004438 1.0e-08 65.1 61 50.8
Gohir.A05G084500 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.0e-08 65.1 67 49.3
TWI63G0695 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 1.4e-08 64.7 104 43.3
PGSC0003DMG400023483 Solanum tuberosum HOM05D005304 ORTHO05D004438 2.3e-08 63.9 95 42.1
Cpa.g.sc128.74 Carica papaya HOM05D005304 ORTHO05D004438 3.0e-08 63.5 96 43.8
Haze_16785 Corylus avellana HOM05D005304 ORTHO05D004438 3.0e-08 63.5 58 51.7
Sabra08G0019700 Salix brachista HOM05D005304 ORTHO05D004438 3.0e-08 63.5 85 43.5
Sed0009329 Sechium edule HOM05D005304 ORTHO05D004438 3.0e-08 63.5 48 58.3
TWI38G0392 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 3.0e-08 63.5 101 40.6
Gohir.D05G087300 Gossypium hirsutum HOM05D005304 ORTHO05D004438 5.1e-08 62.8 63 50.8
Gorai.009G089100 Gossypium raimondii HOM05D005304 ORTHO05D004438 5.1e-08 62.8 63 50.8
Manes.11G153500 Manihot esculenta HOM05D005304 ORTHO05D004438 5.1e-08 62.8 62 45.2
Solyc11g007860.1 Solanum lycopersicum HOM05D005304 ORTHO05D004438 5.1e-08 62.8 95 38.9
Sopen05g033870 Solanum pennellii HOM05D005304 ORTHO05D004438 5.1e-08 62.8 95 42.1
Gohir.A05G393600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 6.7e-08 62.4 84 46.4
Gorai.012G025400 Gossypium raimondii HOM05D005304 ORTHO05D004438 6.7e-08 62.4 84 46.4
ClCG08G007940 Citrullus lanatus HOM05D005304 ORTHO05D004438 8.8e-08 62.0 71 52.1
MELO3C019852.2 Cucumis melo HOM05D005304 ORTHO05D004438 8.8e-08 62.0 70 50.0
Sed0018085 Sechium edule HOM05D005304 ORTHO05D004438 8.8e-08 62.0 106 41.5
Gohir.A01G128800 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.1e-07 61.6 104 39.4
Gohir.D01G118400 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.1e-07 61.6 104 39.4
Gohir.D04G021300 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.1e-07 61.6 84 46.4
Gorai.002G144400 Gossypium raimondii HOM05D005304 ORTHO05D004438 1.1e-07 61.6 104 39.4
Nn2g13894 Nelumbo nucifera HOM05D005304 ORTHO05D004438 1.1e-07 61.6 108 37.0
Sed0006013 Sechium edule HOM05D005304 ORTHO05D004438 1.1e-07 61.6 56 55.4
CSS0034177 Camellia sinensis var. sinensis HOM05D005304 ORTHO05D004438 2.0e-07 60.8 57 49.1
CsaV3_2G032750 Cucumis sativus L. HOM05D005304 ORTHO05D004438 2.0e-07 60.8 85 44.7
Sopen11g003720 Solanum pennellii HOM05D005304 ORTHO05D004438 2.0e-07 60.8 95 36.8
ClCG01G013950 Citrullus lanatus HOM05D026992 ORTHO05D004438 2.6e-07 60.5 59 52.5
COL.COLO4_32872 Corchorus olitorius HOM05D005304 ORTHO05D004438 2.6e-07 60.5 68 47.1
PGSC0003DMG400027330 Solanum tuberosum HOM05D005304 ORTHO05D004438 2.6e-07 60.5 94 39.4
SHI54636 Sapria himalayana HOM05D005304 ORTHO05D004438 4.4e-07 59.7 57 43.9
CANSAT56G0274 Cannabis sativa HOM05D005304 ORTHO05D004438 5.7e-07 59.3 66 42.4
Ciclev10029845m.g Citrus clementina HOM05D005304 ORTHO05D004438 5.7e-07 59.3 95 40.0
Sc20g0001450 Simmondsia chinensis HOM05D005304 ORTHO05D004438 5.7e-07 59.3 87 37.9
Lj5g0009089 Lotus japonicus HOM05D005304 ORTHO05D004438 7.4e-07 58.9 74 43.2
VMungo0720G0262 Vigna mungo HOM05D005304 ORTHO05D004438 7.4e-07 58.9 64 42.2
Phvul.007G141600 Phaseolus vulgaris HOM05D005304 ORTHO05D004438 9.7e-07 58.5 62 43.5
Gohir.A05G290700 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.3e-06 58.2 101 40.6
Gohir.D05G291900 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.3e-06 58.2 101 40.6
Prupe.2G095100 Prunus persica HOM05D005304 ORTHO05D004438 1.3e-06 58.2 102 39.2
Nitab4.5_0001163g0010 Nicotiana tabacum HOM05D005304 ORTHO05D004438 1.7e-06 57.8 64 51.6
CSS0028161 Camellia sinensis var. sinensis HOM05D005304 ORTHO05D004438 2.2e-06 57.4 56 48.2
MELO3C035553.2 Cucumis melo HOM05D026992 ORTHO05D004438 2.2e-06 57.4 67 50.7
Gorai.009G307700 Gossypium raimondii HOM05D005304 ORTHO05D004438 2.2e-06 57.4 101 40.6
Lalb_Chr02g0151151 Lupinus albus HOM05D005304 ORTHO05D004438 2.2e-06 57.4 60 43.3
Psat6g173960 Pisum sativum HOM05D005304 ORTHO05D004438 2.2e-06 57.4 61 45.9
Ca_10460_v3 Cicer arietinum L. HOM05D005304 ORTHO05D004438 2.8e-06 57.0 75 41.3
PGR119G0321 Punica granatum HOM05D005304 ORTHO05D004438 3.7e-06 56.6 83 42.2
CiPaw.13G144100 Carya illinoinensis HOM05D005304 ORTHO05D004438 4.8e-06 56.2 79 41.8
Glyma.20G190800 Glycine max HOM05D005304 ORTHO05D004438 4.8e-06 56.2 62 43.5
TWI79G0532 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 4.8e-06 56.2 93 35.5
Manes.04G012000 Manihot esculenta HOM05D005304 ORTHO05D004438 6.3e-06 55.8 73 42.5
Gohir.A07G105600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 8.2e-06 55.5 54 48.1


User provided reference genes

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