Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G2630 Salvia bowleyana HOM05D007520 ORTHO05D009417 4.6e-149 531.2 265 100.0
SalBow3G0394 Salvia bowleyana HOM05D007520 ORTHO05D009417 4.3e-70 268.9 133 100.0
SalBow6G7185 Salvia bowleyana HOM05D007520 ORTHO05D009417 7.1e-49 198.4 102 98.0
Migut.L00619 Erythranthe guttata HOM05D007520 ORTHO05D009417 2.5e-46 189.9 128 71.9
SalBow2G3493 Salvia bowleyana HOM05D007520 ORTHO05D009417 3.4e-43 179.5 90 100.0
SGA_v2.0_scaffold172G39028 Striga asiatica HOM05D007520 ORTHO05D009417 6.0e-40 168.7 128 66.4
Actinidia11793 Actinidia chinensis HOM05D007520 ORTHO05D009417 6.7e-39 165.2 126 64.3
MD13G1015700 Malus domestica HOM05D007520 ORTHO05D009417 4.3e-38 162.5 126 66.7
Prupe.1G338000 Prunus persica HOM05D007520 ORTHO05D009417 4.3e-38 162.5 126 66.7
COL.COLO4_27582 Corchorus olitorius HOM05D007520 ORTHO05D009417 6.2e-37 158.7 114 67.5
Solyc04g078500.1 Solanum lycopersicum HOM05D007520 ORTHO05D009417 1.1e-36 157.9 118 65.3
Atru.chr11.1007 Acer truncatum HOM05D007520 ORTHO05D009417 1.8e-36 157.1 114 71.9
TAR374G0082 Trochodendron aralioides HOM05D000504 ORTHO05D000403 1.8e-36 157.1 116 66.4
Ciclev10016556m.g Citrus clementina HOM05D007520 ORTHO05D009417 4.0e-36 156.0 117 68.4
Sopen04g032100 Solanum pennellii HOM05D007520 ORTHO05D009417 4.0e-36 156.0 118 64.4
Manes.17G089333 Manihot esculenta HOM05D007520 ORTHO05D009417 6.9e-36 155.2 128 60.2
RcHm_v2.0_Chr4g0433681 Rosa chinensis HOM05D007520 ORTHO05D009417 1.2e-35 154.5 125 63.2
CAN.G1812.4 Capsicum annuum HOM05D007520 ORTHO05D009417 2.0e-35 153.7 133 58.6
Duzib268G1867 Durio zibethinus HOM05D007520 ORTHO05D009417 2.6e-35 153.3 122 60.7
Nn4g24547 Nelumbo nucifera HOM05D007520 ORTHO05D009417 4.5e-35 152.5 115 64.3
Sed0012329 Sechium edule HOM05D007520 ORTHO05D009417 4.5e-35 152.5 128 60.2
PGSC0003DMG400041336 Solanum tuberosum HOM05D001905 ORTHO05D001820 4.5e-35 152.5 121 63.6
FvH4_4g26110 Fragaria vesca HOM05D007520 ORTHO05D009417 1.3e-34 151.0 125 63.2
FAN22G1570 Fragaria x ananassa HOM05D000296 ORTHO05D000175 1.3e-34 151.0 132 61.4
Gorai.008G169800 Gossypium raimondii HOM05D007520 ORTHO05D009417 1.3e-34 151.0 114 64.9
CANSAT78G2519 Cannabis sativa HOM05D007520 ORTHO05D009417 2.2e-34 150.2 131 59.5
Hma1.2p1_0095F.1_g047520 Hydrangea macrophylla HOM05D007520 ORTHO05D009417 2.2e-34 150.2 114 66.7
Atru.BG.295.p Acer truncatum HOM05D007520 ORTHO05D009417 3.8e-34 149.4 114 68.4
TWI53G0076 Tripterygium wilfordii HOM05D007520 ORTHO05D009417 4.9e-34 149.1 114 63.2
PGR042G3173 Punica granatum HOM05D007520 ORTHO05D009417 8.4e-34 148.3 137 53.3
Aqoxy5G01264 Aquilegia oxysepala HOM05D007520 ORTHO05D009417 1.1e-33 147.9 141 53.2
FAN17G2852 Fragaria x ananassa HOM05D007520 ORTHO05D009417 1.9e-33 147.1 116 65.5
FAN12G3032 Fragaria x ananassa HOM05D007520 ORTHO05D009417 2.5e-33 146.7 116 65.5
FAN12G3090 Fragaria x ananassa HOM05D007520 ORTHO05D009417 2.5e-33 146.7 116 65.5
PSO478G1043 Papaver somniferum HOM05D007520 ORTHO05D009417 3.2e-33 146.4 114 59.6
Thecc.02G303900 Theobroma cacao HOM05D007520 ORTHO05D009417 7.1e-33 145.2 106 67.0
Nitab4.5_0004339g0060 Nicotiana tabacum HOM05D007520 ORTHO05D009417 1.2e-32 144.4 127 61.4
Psat6g100600 Pisum sativum HOM05D007520 ORTHO05D009417 1.2e-32 144.4 114 62.3
THA.LOC104824117 Tarenaya hassleriana HOM05D007520 ORTHO05D009417 1.6e-32 144.1 126 53.2
MELO3C020056.2 Cucumis melo HOM05D007520 ORTHO05D009417 2.1e-32 143.7 128 57.0
Nitab4.5_0010118g0020 Nicotiana tabacum HOM05D007520 ORTHO05D009417 3.5e-32 142.9 127 60.6
CsaV3_5G012990 Cucumis sativus L. HOM05D007520 ORTHO05D009417 6.0e-32 142.1 128 57.0
TPR.G35527 Trifolium pratense HOM05D007520 ORTHO05D009417 1.0e-31 141.4 139 51.8
Thhalv10005705m.g Eutrema salsugineum HOM05D007520 ORTHO05D009417 1.3e-31 141.0 126 54.8
PSO017G5472 Papaver somniferum HOM05D007520 ORTHO05D009417 2.3e-31 140.2 117 58.1
BolC7t43791H Brassica oleracea HOM05D007520 ORTHO05D009417 1.1e-30 137.9 122 54.1
Sp2g13330 Schrenkiella parvula HOM05D007520 ORTHO05D009417 1.1e-30 137.9 126 54.0
Medtr1g038820 Medicago truncatula HOM05D007520 ORTHO05D009417 4.3e-30 136.0 114 57.9
BraA06t27270Z Brassica rapa HOM05D007520 ORTHO05D009417 7.4e-30 135.2 122 53.3
AT2G01905 Arabidopsis thaliana HOM05D007520 ORTHO05D009417 1.3e-29 134.4 123 52.8
AL5G11020 Arabidopsis lyrata HOM05D007520 ORTHO05D009417 1.6e-29 134.0 125 51.2
Lj2g0009613 Lotus japonicus HOM05D007520 ORTHO05D009417 1.6e-29 134.0 114 57.9
QL03p039135 Quercus lobata HOM05D007520 ORTHO05D009417 3.7e-29 132.9 114 61.4
Phvul.003G001900 Phaseolus vulgaris HOM05D007520 ORTHO05D009417 6.2e-29 132.1 114 57.9
CARHR144480 Cardamine hirsuta HOM05D007520 ORTHO05D009417 8.2e-29 131.7 126 51.6
Lalb_Chr10g0094861 Lupinus albus HOM05D007520 ORTHO05D009417 8.2e-29 131.7 114 56.1
Ah.11g041100 Amaranthus hybridus HOM05D007520 ORTHO05D009417 3.1e-28 129.8 117 55.6
C07p32740 Brassica napus HOM05D007520 ORTHO05D009417 3.1e-28 129.8 122 53.3
A06p43940 Brassica napus HOM05D007520 ORTHO05D009417 9.0e-28 128.3 122 52.5
EL10Ac1g01972 Beta vulgaris HOM05D007520 ORTHO05D009417 1.2e-27 127.9 138 49.3
CiPaw.06G058600 Carya illinoinensis HOM05D007520 ORTHO05D009417 1.2e-27 127.9 128 51.6
HanXRQChr12g0379401 Helianthus annuus HOM05D007520 ORTHO05D009417 1.2e-27 127.9 117 53.8
arahy.Tifrunner.gnm1.ann1.RL07R4 Arachis hypogaea HOM05D007520 ORTHO05D009417 1.5e-27 127.5 134 50.0
BcaC06g31264 Brassica carinata HOM05D007520 ORTHO05D009417 1.5e-27 127.5 125 52.0
ECA246G0416 Erigeron canadensis HOM05D007520 ORTHO05D009417 2.0e-27 127.1 116 54.3
VMungo0251G1805 Vigna mungo HOM05D007520 ORTHO05D009417 2.6e-27 126.7 120 55.8
Aa31LG2G8010 Aethionema arabicum HOM05D007520 ORTHO05D009417 1.0e-26 124.8 150 46.7
Sc15g0004470 Simmondsia chinensis HOM05D007520 ORTHO05D009417 1.3e-26 124.4 114 52.6
Zm00001eb010100 Zea mays HOM05D007520 ORTHO05D009417 1.3e-26 124.4 118 44.1
CSS0024703 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 5.0e-26 122.5 116 56.0
Lsat_1_v5_gn_5_170921 Lactuca sativa HOM05D007520 ORTHO05D009417 2.7e-24 116.7 115 50.4
AUR62036879 Chenopodium quinoa HOM05D007520 ORTHO05D009417 4.6e-24 115.9 104 54.8
Dinv08902 Davidia involucrata HOM05D007520 ORTHO05D009417 6.1e-24 115.5 101 59.4
CSS0003025 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 1.8e-23 114.0 116 53.4
DCAR_002655 Daucus carota HOM05D007520 ORTHO05D009417 5.1e-23 112.5 92 58.7
MSTRG.8107 Avicennia marina HOM05D007520 ORTHO05D009417 1.1e-22 111.3 90 61.1
Rhsim09G0085600 Rhododendron simsii HOM05D007520 ORTHO05D009417 1.9e-22 110.5 92 62.0
Glyma.14G224300 Glycine max HOM05D007520 ORTHO05D009417 6.3e-21 105.5 107 53.3
Cc11_g05730 Coffea canephora HOM05D007520 ORTHO05D009417 1.1e-20 104.8 72 65.3
Lj3A859T72 Lonicera japonica HOM05D007520 ORTHO05D009417 9.0e-20 101.7 113 52.2
Hma1.2p1_0095F.1_g047530 Hydrangea macrophylla HOM05D007520 ORTHO05D009417 1.5e-19 100.9 126 47.6
PGSC0003DMG400013121 Solanum tuberosum HOM05D007520 ORTHO05D009417 2.0e-19 100.5 70 68.6
CSS0008274 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 3.4e-19 99.8 66 72.7
Gohir.A12G153900 Gossypium hirsutum HOM05D007520 ORTHO05D009417 8.5e-18 95.1 76 57.9
Gohir.D12G157000 Gossypium hirsutum HOM05D007520 ORTHO05D009417 1.9e-17 94.0 74 59.5
GSVIVG01011596001 Vitis vinifera HOM05D007520 ORTHO05D009417 3.9e-15 86.3 69 60.9
HPP92_016406 Vanilla planifolia HOM05D007520 ORTHO05D009417 3.3e-14 83.2 64 65.6
Carub.0005s0089 Capsella rubella HOM05D007520 ORTHO05D009417 1.8e-12 77.4 84 45.2
GSVIVG01011595001 Vitis vinifera HOM05D007520 ORTHO05D009417 1.5e-11 74.3 52 69.2
Pp3c10_19450 Physcomitrium patens HOM05D007520 ORTHO05D009417 5.9e-11 72.4 107 29.9
ClCG11G001000 Citrullus lanatus HOM05D007520 ORTHO05D009417 1.4e-09 67.8 115 39.1
Carub.0005s0090 Capsella rubella HOM05D007520 ORTHO05D009417 1.2e-08 64.7 51 60.8
Mapoly0059s0009 Marchantia polymorpha HOM05D007520 ORTHO05D009417 1.2e-08 64.7 144 27.1
CSS0021820 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 2.1e-08 63.9 51 58.8
CSS0032687 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 2.1e-08 63.9 51 58.8
HPP92_016407 Vanilla planifolia HOM05D007520 ORTHO05D009417 3.0e-07 60.1 55 49.1


User provided reference genes

Program Settings