Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G2612 Salvia bowleyana HOM05D007029 ORTHO05D008258 3.0e-93 345.1 172 100.0
Migut.A00446 Erythranthe guttata HOM05D007029 ORTHO05D008258 3.2e-74 282.0 158 84.8
MSTRG.25772 Avicennia marina HOM05D007029 ORTHO05D008258 1.6e-73 279.6 158 85.4
CAN.G947.13 Capsicum annuum HOM05D007029 ORTHO05D008258 3.6e-70 268.5 158 81.6
Nitab4.5_0001159g0100 Nicotiana tabacum HOM05D007029 ORTHO05D008258 1.1e-69 266.9 158 80.4
Nitab4.5_0003963g0040 Nicotiana tabacum HOM05D007029 ORTHO05D008258 1.1e-69 266.9 158 80.4
Sopen12g032190 Solanum pennellii HOM05D007029 ORTHO05D008258 2.0e-68 262.7 158 80.4
unitig_748.g7379 Utricularia gibba HOM05D007029 ORTHO05D008258 4.1e-66 255.0 158 76.6
CSS0017002 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 1.2e-65 253.4 158 75.3
CSS0043998 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 1.2e-65 253.4 158 75.3
Lj7A749T66 Lonicera japonica HOM05D007029 ORTHO05D008258 7.8e-65 250.8 159 76.7
MD15G1110100 Malus domestica HOM05D007029 ORTHO05D008258 1.7e-64 249.6 158 74.7
Phvul.001G057900 Phaseolus vulgaris HOM05D007029 ORTHO05D008258 8.6e-64 247.3 158 72.2
TPR.G12034 Trifolium pratense HOM05D007029 ORTHO05D008258 1.1e-63 246.9 158 72.2
Psat6g031920 Pisum sativum HOM05D007029 ORTHO05D008258 1.5e-63 246.5 158 71.5
Cfa013252 Carpinus fangiana HOM05D007029 ORTHO05D008258 1.9e-63 246.1 158 73.4
MELO3C003643.2 Cucumis melo HOM05D007029 ORTHO05D008258 4.3e-63 245.0 158 71.5
Glyma.14G132800 Glycine max HOM05D007029 ORTHO05D008258 4.3e-63 245.0 158 71.5
Potri.006G278500 Populus trichocarpa HOM05D007029 ORTHO05D008258 7.3e-63 244.2 158 70.9
Sabra06G0216100 Salix brachista HOM05D007029 ORTHO05D008258 9.6e-63 243.8 158 71.5
Duzib168G0066 Durio zibethinus HOM05D007029 ORTHO05D008258 1.6e-62 243.0 158 71.5
Sed0023533 Sechium edule HOM05D007029 ORTHO05D008258 1.6e-62 243.0 158 70.3
Sc09g0007900 Simmondsia chinensis HOM05D007029 ORTHO05D008258 1.6e-62 243.0 158 71.5
Lalb_Chr24g0402421 Lupinus albus HOM05D007029 ORTHO05D008258 2.8e-62 242.3 158 70.3
Prupe.1G462300 Prunus persica HOM05D007029 ORTHO05D008258 3.6e-62 241.9 158 70.9
Manes.03G086800 Manihot esculenta HOM05D007029 ORTHO05D008258 4.7e-62 241.5 158 70.9
Hund03277 Selenicereus undatus HOM05D007029 ORTHO05D008258 6.2e-62 241.1 158 70.9
PGSC0003DMG400029282 Solanum tuberosum HOM05D007029 ORTHO05D008258 6.2e-62 241.1 148 79.1
Cc06_g08830 Coffea canephora HOM05D007029 ORTHO05D008258 8.1e-62 240.7 158 73.4
PGR044G0703 Punica granatum HOM05D007029 ORTHO05D008258 8.1e-62 240.7 158 71.5
Sc09g0007640 Simmondsia chinensis HOM05D007029 ORTHO05D008258 8.1e-62 240.7 158 70.9
Ca_12881_v3 Cicer arietinum L. HOM05D007029 ORTHO05D008258 1.4e-61 240.0 158 69.6
GSVIVG01035546001 Vitis vinifera HOM05D007029 ORTHO05D008258 1.4e-61 240.0 158 70.3
Lj5g0005194 Lotus japonicus HOM05D007029 ORTHO05D008258 2.4e-61 239.2 158 69.0
FvH4_2g30670 Fragaria vesca HOM05D007029 ORTHO05D008258 3.1e-61 238.8 158 70.3
TAR626G0900 Trochodendron aralioides HOM05D007029 ORTHO05D008258 3.1e-61 238.8 159 71.7
Oeu059287.2 Olea europaea HOM05D007029 ORTHO05D008258 6.9e-61 237.7 145 79.3
Nn8g40869 Nelumbo nucifera HOM05D007029 ORTHO05D008258 9.0e-61 237.3 158 69.0
RcHm_v2.0_Chr6g0312221 Rosa chinensis HOM05D007029 ORTHO05D008258 9.0e-61 237.3 158 70.3
Thecc.09G005000 Theobroma cacao HOM05D007029 ORTHO05D008258 1.5e-60 236.5 158 69.6
Gorai.010G123900 Gossypium raimondii HOM05D007029 ORTHO05D008258 3.4e-60 235.3 158 70.3
FAN20G2423 Fragaria x ananassa HOM05D007029 ORTHO05D008258 4.4e-60 235.0 158 69.6
CANSAT25G3139 Cannabis sativa HOM05D007029 ORTHO05D008258 1.3e-59 233.4 171 64.3
Aqoxy7G02769 Aquilegia oxysepala HOM05D007029 ORTHO05D008258 1.7e-59 233.0 158 69.0
Eucgr.C03998 Eucalyptus grandis HOM05D007029 ORTHO05D008258 2.9e-59 232.3 158 68.4
PSO144G0063 Papaver somniferum HOM05D007029 ORTHO05D008258 2.9e-59 232.3 158 69.0
FAN24G0248 Fragaria x ananassa HOM05D007029 ORTHO05D008258 6.4e-59 231.1 158 68.4
Cpa.g.sc10.205 Carica papaya HOM05D007029 ORTHO05D008258 1.1e-58 230.3 176 62.5
ATR0626G398 Amborella trichopoda HOM05D007029 ORTHO05D008258 1.4e-58 229.9 157 65.6
SGA_v2.0_scaffold27G11664 Striga asiatica HOM05D007029 ORTHO05D008258 4.2e-58 228.4 237 53.6
BcaB08g37096 Brassica carinata HOM05D007029 ORTHO05D008258 5.4e-58 228.0 158 68.4
AL6G21140 Arabidopsis lyrata HOM05D007029 ORTHO05D008258 2.7e-57 225.7 158 67.1
C09p66200 Brassica napus HOM05D007029 ORTHO05D008258 3.5e-57 225.3 158 67.1
BolC9t59441H Brassica oleracea HOM05D007029 ORTHO05D008258 3.5e-57 225.3 158 67.1
CsaV3_3G046940 Cucumis sativus L. HOM05D007029 ORTHO05D008258 3.5e-57 225.3 178 61.2
A10p26970 Brassica napus HOM05D007029 ORTHO05D008258 4.6e-57 224.9 169 61.5
CARHR202690 Cardamine hirsuta HOM05D007029 ORTHO05D008258 4.6e-57 224.9 158 66.5
Sp6g32830 Schrenkiella parvula HOM05D007029 ORTHO05D008258 4.6e-57 224.9 158 66.5
Thhalv10014744m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 6.0e-57 224.6 158 65.8
Aa31LG3G16490 Aethionema arabicum HOM05D007029 ORTHO05D008258 7.8e-57 224.2 158 66.5
AT5G10620 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 7.8e-57 224.2 158 66.5
BolC9t59447H Brassica oleracea HOM05D007029 ORTHO05D008258 1.3e-56 223.4 158 66.5
C09p66570 Brassica napus HOM05D007029 ORTHO05D008258 1.7e-56 223.0 158 67.1
C09p66410 Brassica napus HOM05D007029 ORTHO05D008258 3.9e-56 221.9 158 66.5
BraA10t44748Z Brassica rapa HOM05D007029 ORTHO05D008258 3.9e-56 221.9 158 65.2
Atru.chr7.2665 Acer truncatum HOM05D007029 ORTHO05D008258 1.5e-55 219.9 162 65.4
HanXRQChr14g0454741 Helianthus annuus HOM05D007029 ORTHO05D008258 5.6e-55 218.0 159 65.4
Os04g0606900 Oryza sativa ssp. japonica HOM05D007029 ORTHO05D008258 7.3e-55 217.6 158 64.6
THA.LOC104799006 Tarenaya hassleriana HOM05D007029 ORTHO05D008258 1.3e-54 216.9 158 63.3
QL12p024672 Quercus lobata HOM05D007029 ORTHO05D008258 2.1e-54 216.1 145 68.3
CiPaw.07G214600 Carya illinoinensis HOM05D007029 ORTHO05D008258 4.8e-54 214.9 156 66.0
EL10Ac2g03716 Beta vulgaris HOM05D007029 ORTHO05D008258 3.1e-53 212.2 145 69.7
Glyma.17G201400 Glycine max HOM05D007029 ORTHO05D008258 1.5e-52 209.9 138 68.1
Gohir.A06G106900 Gossypium hirsutum HOM05D007029 ORTHO05D008258 4.5e-52 208.4 145 67.6
Zm00001eb071440 Zea mays HOM05D007029 ORTHO05D008258 4.5e-52 208.4 164 62.8
ClCG05G017440 Citrullus lanatus HOM05D007029 ORTHO05D008258 3.8e-51 205.3 139 68.3
TWI63G1096 Tripterygium wilfordii HOM05D007029 ORTHO05D008258 4.9e-51 204.9 145 66.2
Mapoly0056s0124 Marchantia polymorpha HOM05D007029 ORTHO05D008258 1.1e-50 203.8 158 58.2
Oeu038914.4 Olea europaea HOM05D000263 ORTHO05D008258 1.9e-50 203.0 123 79.7
arahy.Tifrunner.gnm1.ann1.MMLL3W Arachis hypogaea HOM05D007029 ORTHO05D008258 4.2e-50 201.8 158 63.3
Pp3c10_14520 Physcomitrium patens HOM05D007029 ORTHO05D008258 3.9e-48 195.3 158 53.2
CBR_g21129 Chara braunii HOM05D007029 ORTHO05D008258 5.6e-47 191.4 160 56.2
Ciclev10009808m.g Citrus clementina HOM05D007029 ORTHO05D008258 1.6e-46 189.9 166 57.2
Carub.0006s0910 Capsella rubella HOM05D007029 ORTHO05D008258 6.2e-46 188.0 137 63.5
AagrBONN_evm.TU.Sc2ySwM_368.1595 Anthoceros agrestis HOM05D007029 ORTHO05D008258 5.3e-45 184.9 153 54.2
SMO145G0271 Selaginella moellendorffii HOM05D007029 ORTHO05D008258 2.9e-43 179.1 158 51.9
arahy.Tifrunner.gnm1.ann1.J6QZET Arachis hypogaea HOM05D007029 ORTHO05D008258 6.4e-43 177.9 145 60.7
MBI13_g31530_MAGBIO Magnolia biondii HOM05D007029 ORTHO05D008258 3.2e-42 175.6 175 53.7
COL.COLO4_18612 Corchorus olitorius HOM05D007029 ORTHO05D008258 1.2e-41 173.7 119 64.7
Dinv09200 Davidia involucrata HOM05D007029 ORTHO05D008258 1.0e-40 170.6 109 72.5
MCO07G593 Micromonas commoda HOM05D007029 ORTHO05D008258 3.9e-40 168.7 158 50.0
SEGI_22347 Sequoiadendron giganteum HOM05D007029 ORTHO05D008258 1.5e-39 166.8 132 57.6
Solyc12g096330.3 Solanum lycopersicum HOM05D007029 ORTHO05D008258 2.5e-39 166.0 97 81.4
Cre16.g680100 Chlamydomonas reinhardtii HOM05D007029 ORTHO05D008258 2.8e-38 162.5 158 52.5
Peaxi162Scf00459g00835 Petunia axillaris HOM05D007029 ORTHO05D008258 2.8e-38 162.5 97 80.4
Actinidia22252 Actinidia chinensis HOM05D007029 ORTHO05D008258 4.8e-38 161.8 107 69.2
Oeu059279.1 Olea europaea HOM05D007029 ORTHO05D008258 4.8e-38 161.8 98 81.6
Haze_08560 Corylus avellana HOM05D007029 ORTHO05D008258 2.6e-36 156.0 145 57.2
CDE04G2652 Ceratophyllum demersum HOM05D000178 ORTHO05D000229 4.2e-34 148.7 109 63.3
Lsat_1_v5_gn_2_109441 Lactuca sativa HOM05D007029 ORTHO05D008258 9.3e-34 147.5 124 54.8
Medtr1g010000 Medicago truncatula HOM05D007029 ORTHO05D008258 2.7e-33 146.0 96 70.8
VMungo0647G0111 Vigna mungo HOM05D007029 ORTHO05D008258 6.7e-32 141.4 103 63.1
AUR62020630 Chenopodium quinoa HOM05D007029 ORTHO05D008258 3.3e-31 139.0 96 67.7
C09p66490 Brassica napus HOM05D007029 ORTHO05D008258 4.3e-31 138.7 88 75.0
AUR62038752 Chenopodium quinoa HOM05D007029 ORTHO05D008258 5.7e-31 138.3 96 67.7
Gohir.D06G109100 Gossypium hirsutum HOM05D007029 ORTHO05D008258 4.8e-30 135.2 96 67.7
Ah.10g033770 Amaranthus hybridus HOM05D007029 ORTHO05D008258 4.1e-29 132.1 96 62.5
C09p66660 Brassica napus HOM05D007029 ORTHO05D008258 3.8e-27 125.6 97 59.8
Hma1.2p1_0443F.1_g154050 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 3.8e-27 125.6 75 80.0
PRCOL_00001289 Prasinoderma coloniale HOM05D007029 ORTHO05D008258 3.2e-26 122.5 138 47.1
Thhalv10000503m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 9.3e-26 120.9 130 50.8
Haze_21697 Corylus avellana HOM05D000022 ORTHO05D010831 6.5e-19 98.2 66 69.7
COL.COLO4_02059 Corchorus olitorius HOM05D007029 ORTHO05D008258 1.2e-17 94.0 155 29.7
Hma1.2p1_0443F.1_g154060 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 1.1e-15 87.4 49 81.6
ECA238G0229 Erigeron canadensis HOM05D007029 ORTHO05D008258 1.3e-14 84.0 61 60.7
Hma1.2p1_0443F.1_g154040 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 8.2e-14 81.3 48 77.1
CDE07G1585 Ceratophyllum demersum HOM05D003168 ORTHO05D003590 4.2e-10 68.9 49 63.3
AT5G10605 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 5.7e-07 58.5 43 67.4


User provided reference genes

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