Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G2327 Salvia bowleyana HOM05D007188 ORTHO05D009102 2.6e-127 458.8 232 100.0
Migut.F01952 Erythranthe guttata HOM05D007188 ORTHO05D009102 3.9e-75 285.4 205 70.7
SGA_v2.0_scaffold62G21381 Striga asiatica HOM05D007188 ORTHO05D009102 4.7e-73 278.5 204 72.1
Actinidia38870 Actinidia chinensis HOM05D007188 ORTHO05D009102 1.4e-64 250.4 174 73.6
Cc02_g10880 Coffea canephora HOM05D007188 ORTHO05D009102 4.0e-64 248.8 210 64.8
Sabra08G0023300 Salix brachista HOM05D007188 ORTHO05D009102 8.9e-64 247.7 208 63.9
Potri.008G034900 Populus trichocarpa HOM05D007188 ORTHO05D009102 1.2e-63 247.3 210 63.3
TWI38G2147 Tripterygium wilfordii HOM05D007188 ORTHO05D009102 3.4e-63 245.7 177 70.1
GSVIVG01016213001 Vitis vinifera HOM05D007188 ORTHO05D009102 3.4e-63 245.7 206 64.1
CSS0035829 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 5.8e-63 245.0 203 61.6
Gohir.A05G293300 Gossypium hirsutum HOM05D007188 ORTHO05D009102 5.8e-63 245.0 189 66.7
CSS0007320 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 7.6e-63 244.6 203 61.1
Solyc05g055550.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 7.6e-63 244.6 159 73.6
Sopen05g034000 Solanum pennellii HOM05D007188 ORTHO05D009102 7.6e-63 244.6 159 73.6
Duzib106G0123 Durio zibethinus HOM05D007188 ORTHO05D009102 9.9e-63 244.2 159 73.6
QL08p054189 Quercus lobata HOM05D007188 ORTHO05D009102 3.8e-62 242.3 191 65.4
PGSC0003DMG400023370 Solanum tuberosum HOM05D007188 ORTHO05D009102 3.8e-62 242.3 160 75.0
RhsimUnG0185400 Rhododendron simsii HOM05D007188 ORTHO05D009102 4.9e-62 241.9 142 82.4
Eucgr.G02872 Eucalyptus grandis HOM05D007188 ORTHO05D009102 6.4e-62 241.5 158 70.9
Gorai.009G310600 Gossypium raimondii HOM05D007188 ORTHO05D009102 6.4e-62 241.5 151 76.2
Gohir.D05G294000 Gossypium hirsutum HOM05D007188 ORTHO05D009102 8.4e-62 241.1 151 75.5
Nn6g35269 Nelumbo nucifera HOM05D007188 ORTHO05D009102 1.4e-61 240.4 204 62.3
TAR623G0008 Trochodendron aralioides HOM05D007188 ORTHO05D009102 1.9e-61 240.0 210 61.0
CAN.G694.38 Capsicum annuum HOM05D007188 ORTHO05D009102 2.4e-61 239.6 158 75.3
MD01G1102700 Malus domestica HOM05D007188 ORTHO05D009102 2.4e-61 239.6 194 64.4
Rhsim09G0148000 Rhododendron simsii HOM05D007188 ORTHO05D009102 4.1e-61 238.8 142 81.7
Solyc02g033060.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 4.1e-61 238.8 159 72.3
Phvul.007G099300 Phaseolus vulgaris HOM05D007188 ORTHO05D009102 1.6e-60 236.9 169 70.4
CANSAT56G0643 Cannabis sativa HOM05D007188 ORTHO05D009102 2.1e-60 236.5 166 70.5
Cfa001805 Carpinus fangiana HOM05D007188 ORTHO05D009102 7.8e-60 234.6 171 70.8
Aqoxy1G01136 Aquilegia oxysepala HOM05D007188 ORTHO05D009102 1.7e-59 233.4 214 60.7
HanXRQChr08g0218401 Helianthus annuus HOM05D007188 ORTHO05D009102 5.1e-59 231.9 175 66.3
CiPaw.02G171800 Carya illinoinensis HOM05D007188 ORTHO05D009102 6.6e-59 231.5 180 67.2
A03p36520 Brassica napus HOM05D007188 ORTHO05D009102 8.7e-59 231.1 162 67.3
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 1.1e-58 230.7 162 69.8
VMungo0720G2339 Vigna mungo HOM05D007188 ORTHO05D009102 1.1e-58 230.7 175 66.9
ECA233G0714 Erigeron canadensis HOM05D007188 ORTHO05D009102 1.5e-58 230.3 185 63.2
Aa31LG3G3010 Aethionema arabicum HOM05D007188 ORTHO05D009102 2.5e-58 229.6 207 56.5
BraA03t12819Z Brassica rapa HOM05D007188 ORTHO05D009102 2.5e-58 229.6 162 66.7
Lsat_1_v5_gn_8_20860 Lactuca sativa HOM05D007188 ORTHO05D009102 2.5e-58 229.6 171 67.3
BolC3t16687H Brassica oleracea HOM05D007188 ORTHO05D009102 3.3e-58 229.2 162 66.7
Manes.07G133140 Manihot esculenta HOM05D007188 ORTHO05D009102 3.3e-58 229.2 170 68.8
Atru.chr12.855 Acer truncatum HOM05D007188 ORTHO05D009102 4.3e-58 228.8 209 59.3
arahy.Tifrunner.gnm1.ann1.3RW2WH Arachis hypogaea HOM05D007188 ORTHO05D009102 4.3e-58 228.8 147 75.5
arahy.Tifrunner.gnm1.ann1.CRM3NE Arachis hypogaea HOM05D007188 ORTHO05D009102 4.3e-58 228.8 147 75.5
Peaxi162Scf00176g01519 Petunia axillaris HOM05D007188 ORTHO05D009102 4.3e-58 228.8 148 76.4
unitig_88.g27814 Utricularia gibba HOM05D007188 ORTHO05D009102 4.3e-58 228.8 205 58.5
AUR62014280 Chenopodium quinoa HOM05D007188 ORTHO05D009102 5.6e-58 228.4 205 62.0
C03p44120 Brassica napus HOM05D007188 ORTHO05D009102 7.3e-58 228.0 164 65.2
Glyma.20G183500 Glycine max HOM05D007188 ORTHO05D009102 9.6e-58 227.6 147 75.5
RcHm_v2.0_Chr1g0362491 Rosa chinensis HOM05D007188 ORTHO05D009102 1.6e-57 226.9 166 68.1
AL3G21760 Arabidopsis lyrata HOM05D007188 ORTHO05D009102 2.8e-57 226.1 161 67.7
Sed0000210 Sechium edule HOM05D007188 ORTHO05D009102 4.7e-57 225.3 158 69.0
TPR.G10293 Trifolium pratense HOM05D007188 ORTHO05D009102 6.2e-57 224.9 180 62.8
Nitab4.5_0001760g0020 Nicotiana tabacum HOM05D007188 ORTHO05D009102 8.1e-57 224.6 160 71.2
Sc06g0002050 Simmondsia chinensis HOM05D007188 ORTHO05D009102 1.1e-56 224.2 144 73.6
CARHR084890 Cardamine hirsuta HOM05D007188 ORTHO05D009102 1.4e-56 223.8 160 66.2
CsaV3_5G036040 Cucumis sativus L. HOM05D007188 ORTHO05D009102 1.8e-56 223.4 168 66.7
Medtr1g094160 Medicago truncatula HOM05D007188 ORTHO05D009102 1.8e-56 223.4 182 61.5
ClCG05G021230 Citrullus lanatus HOM05D007188 ORTHO05D009102 2.4e-56 223.0 195 63.1
AT3G10405 Arabidopsis thaliana HOM05D007188 ORTHO05D009102 3.1e-56 222.6 161 65.8
Lalb_Chr21g0313651 Lupinus albus HOM05D007188 ORTHO05D009102 3.1e-56 222.6 154 73.4
Ca_10538_v3 Cicer arietinum L. HOM05D007188 ORTHO05D009102 6.9e-56 221.5 172 64.5
Sp3g08680 Schrenkiella parvula HOM05D007188 ORTHO05D009102 1.2e-55 220.7 163 63.8
Lj5g0026151 Lotus japonicus HOM05D007188 ORTHO05D009102 1.5e-55 220.3 164 67.1
PSO063G4012 Papaver somniferum HOM05D007188 ORTHO05D009102 2.0e-55 219.9 165 65.5
Thhalv10021497m.g Eutrema salsugineum HOM05D007188 ORTHO05D009102 4.4e-55 218.8 148 67.6
Carub.0003s0959 Capsella rubella HOM05D007188 ORTHO05D009102 9.9e-55 217.6 160 65.0
MELO3C012404.2 Cucumis melo HOM05D007188 ORTHO05D009102 9.9e-55 217.6 156 67.9
CDE09G0470 Ceratophyllum demersum HOM05D007188 ORTHO05D009102 1.3e-54 217.2 173 60.1
FAN01G3175 Fragaria x ananassa HOM05D007188 ORTHO05D009102 3.2e-53 212.6 168 62.5
FAN03G0393 Fragaria x ananassa HOM05D007188 ORTHO05D009102 3.2e-53 212.6 208 54.3
Psat6g181120 Pisum sativum HOM05D007188 ORTHO05D009102 7.1e-53 211.5 166 61.4
FAN06G0953 Fragaria x ananassa HOM05D007188 ORTHO05D009102 7.8e-52 208.0 183 56.8
FAN06G2123 Fragaria x ananassa HOM05D007188 ORTHO05D009102 7.8e-52 208.0 183 56.8
Sopen02g011440 Solanum pennellii HOM05D007188 ORTHO05D009102 1.3e-51 207.2 122 80.3
FAN10G2630 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.7e-51 206.8 183 56.3
Glyma.10G207400 Glycine max HOM05D007188 ORTHO05D009102 1.7e-51 206.8 171 64.3
Dinv31237 Davidia involucrata HOM05D007188 ORTHO05D009102 6.6e-51 204.9 177 65.5
THA.LOC104826897 Tarenaya hassleriana HOM05D007188 ORTHO05D009102 8.1e-49 198.0 207 53.1
Os10g0545100 Oryza sativa ssp. japonica HOM05D007188 ORTHO05D009102 4.0e-48 195.7 147 63.3
Thecc.10G085100 Theobroma cacao HOM05D007188 ORTHO05D009102 5.3e-48 195.3 139 69.1
BcaC01g04184 Brassica carinata HOM05D007188 ORTHO05D009102 2.0e-47 193.4 162 59.3
COL.COLO4_36178 Corchorus olitorius HOM05D007188 ORTHO05D009102 3.4e-47 192.6 193 55.4
Zm00001eb022660 Zea mays HOM05D007188 ORTHO05D009102 2.2e-46 189.9 182 54.9
Prupe.2G208300 Prunus persica HOM05D007188 ORTHO05D009102 9.3e-45 184.5 134 68.7
EL10Ac4g08743 Beta vulgaris HOM05D007188 ORTHO05D009102 2.1e-44 183.3 171 57.3
Haze_16743 Corylus avellana HOM05D007188 ORTHO05D009102 2.1e-44 183.3 175 57.7
vmacro04839 Vaccinium macrocarpon HOM05D007188 ORTHO05D009102 3.9e-43 179.1 151 61.6
Hund14950 Selenicereus undatus HOM05D007188 ORTHO05D009102 1.8e-40 170.2 158 59.5
Nitab4.5_0000096g0330 Nicotiana tabacum HOM05D007188 ORTHO05D009102 6.9e-40 168.3 137 65.7
Mapoly0050s0048 Marchantia polymorpha HOM05D007188 ORTHO05D009102 9.9e-39 164.5 147 53.1
Mapoly0278s0008 Marchantia polymorpha HOM05D007188 ORTHO05D009102 9.9e-39 164.5 147 53.1
Pp3c2_18450 Physcomitrium patens HOM05D007188 ORTHO05D009102 3.8e-38 162.5 147 53.7
AagrBONN_evm.TU.Sc2ySwM_228.639 Anthoceros agrestis HOM05D007188 ORTHO05D009102 2.8e-33 146.4 151 48.3
Ciclev10033195m.g Citrus clementina HOM05D007188 ORTHO05D009102 1.2e-31 141.0 83 79.5
SMO358G0267 Selaginella moellendorffii HOM05D007188 ORTHO05D009102 1.6e-28 130.6 192 37.5
CBR_g28804 Chara braunii HOM05D007188 ORTHO05D009102 4.1e-24 115.9 193 37.8
FvH4_7g18710 Fragaria vesca HOM05D007188 ORTHO05D009102 4.5e-23 112.5 105 55.2
PSO339G6470 Papaver somniferum HOM05D007188 ORTHO05D009102 5.9e-23 112.1 113 50.4
SEGI_08985 Sequoiadendron giganteum HOM05D007188 ORTHO05D009102 5.5e-21 105.5 73 69.9
Rhsim09G0147800 Rhododendron simsii HOM05D007188 ORTHO05D009102 5.3e-16 89.0 217 33.6
MCO11G330 Micromonas commoda HOM05D007188 ORTHO05D009102 3.4e-15 86.3 144 33.3
PRCOL_00002171 Prasinoderma coloniale HOM05D007188 ORTHO05D009102 4.2e-13 79.3 137 34.3
Cre10.g464650 Chlamydomonas reinhardtii HOM05D007188 ORTHO05D009102 2.7e-12 76.6 158 27.8
RhsimUnG0185100 Rhododendron simsii HOM05D007188 ORTHO05D009102 1.0e-11 74.7 217 31.8
AUR62034156 Chenopodium quinoa HOM05D007188 ORTHO05D009102 2.3e-11 73.6 103 45.6
FAN10G3168 Fragaria x ananassa HOM05D007188 ORTHO05D009102 5.1e-11 72.4 78 50.0
Oeu034116.1 Olea europaea HOM05D007188 ORTHO05D009102 1.1e-10 71.2 44 79.5
HPP92_025582 Vanilla planifolia HOM05D006951 ORTHO05D008594 1.5e-07 60.8 48 52.1
HPP92_025583 Vanilla planifolia HOM05D006951 ORTHO05D008594 2.6e-07 60.1 44 63.6
CDE02G0641 Ceratophyllum demersum HOM05D000146 ORTHO05D002110 2.2e-06 57.0 58 46.6
vmacro04837 Vaccinium macrocarpon HOM05D000026 ORTHO05D000094 2.2e-06 57.0 40 65.0
VMungo1080G0524 Vigna mungo HOM05D007188 ORTHO05D008722 6.5e-06 55.5 37 70.3


User provided reference genes

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