Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G2304 Salvia bowleyana HOM05D000039 ORTHO05D363553 4.0e-63 244.6 122 100.0
SalBow4G3266 Salvia bowleyana HOM05D000039 ORTHO05D009263 5.8e-14 81.3 38 97.4
Migut.A00392 Erythranthe guttata HOM05D000039 ORTHO05D009263 6.7e-10 67.8 37 81.1
Sabra18G0018900 Salix brachista HOM05D000039 ORTHO05D009263 5.6e-09 64.7 51 56.9
vmacro11277 Vaccinium macrocarpon HOM05D000039 ORTHO05D009263 7.4e-09 64.3 53 56.6
Potri.006G267400 Populus trichocarpa HOM05D000039 ORTHO05D009263 9.6e-09 63.9 36 77.8
Potri.018G015500 Populus trichocarpa HOM05D000039 ORTHO05D009263 1.3e-08 63.5 42 66.7
Gohir.D07G037500 Gossypium hirsutum HOM05D000039 ORTHO05D009263 2.8e-08 62.4 37 75.7
Gorai.001G039200 Gossypium raimondii HOM05D000039 ORTHO05D009263 2.8e-08 62.4 37 75.7
Rhsim02G0218000 Rhododendron simsii HOM05D000039 ORTHO05D009263 3.7e-08 62.0 36 75.0
Glyma.14G104400 Glycine max HOM05D000039 ORTHO05D009263 4.8e-08 61.6 45 60.0
Gohir.A07G034000 Gossypium hirsutum HOM05D000039 ORTHO05D009263 4.8e-08 61.6 37 75.7
SGA_v2.0_scaffold193G40681 Striga asiatica HOM05D000039 ORTHO05D009263 4.8e-08 61.6 37 70.3
ClCG05G016080 Citrullus lanatus HOM05D000039 ORTHO05D009263 6.2e-08 61.2 38 73.7
CsaV3_4G036360 Cucumis sativus L. HOM05D000039 ORTHO05D009263 6.2e-08 61.2 33 78.8
Sed0024750 Sechium edule HOM05D000039 ORTHO05D009263 6.2e-08 61.2 38 71.1
CSS0035787 Camellia sinensis var. sinensis HOM05D000039 ORTHO05D009263 8.1e-08 60.8 36 69.4
CSS0045529 Camellia sinensis var. sinensis HOM05D000039 ORTHO05D009263 8.1e-08 60.8 36 69.4
Ciclev10008792m.g Citrus clementina HOM05D000039 ORTHO05D009263 8.1e-08 60.8 36 69.4
Atru.chr7.2586 Acer truncatum HOM05D000039 ORTHO05D009263 1.1e-07 60.5 36 66.7
Glyma.17G221400 Glycine max HOM05D000039 ORTHO05D009263 1.1e-07 60.5 45 60.0
Hma1.2p1_0022F.1_g014830 Hydrangea macrophylla HOM05D000039 ORTHO05D009263 1.1e-07 60.5 37 73.0
Phvul.001G043100 Phaseolus vulgaris HOM05D000039 ORTHO05D009263 1.1e-07 60.5 45 60.0
Aqoxy7G03275 Aquilegia oxysepala HOM05D000039 ORTHO05D009263 1.4e-07 60.1 37 64.9
Lj1g0027084 Lotus japonicus HOM05D000039 ORTHO05D009263 1.4e-07 60.1 53 49.1
MBI15_g07485_MAGBIO Magnolia biondii HOM05D000039 ORTHO05D009263 1.4e-07 60.1 38 63.2
PSO017G2355 Papaver somniferum HOM05D000039 ORTHO05D009263 1.4e-07 60.1 45 53.3
PSO170G3610 Papaver somniferum HOM05D000039 ORTHO05D009263 1.4e-07 60.1 45 55.6
Eucgr.C04029 Eucalyptus grandis HOM05D000039 ORTHO05D009263 1.8e-07 59.7 36 72.2
Lalb_Chr08g0244511 Lupinus albus HOM05D000039 ORTHO05D009263 1.8e-07 59.7 53 47.2
MELO3C016943.2 Cucumis melo HOM05D000039 ORTHO05D009263 2.4e-07 59.3 36 75.0
Thecc.09G012500 Theobroma cacao HOM05D000039 ORTHO05D009263 2.4e-07 59.3 37 73.0
arahy.Tifrunner.gnm1.ann1.7XK49S Arachis hypogaea HOM05D000039 ORTHO05D009263 3.1e-07 58.9 46 58.7
MD08G1051200 Malus domestica HOM05D000039 ORTHO05D009263 3.1e-07 58.9 38 68.4
VMungo0647G2025 Vigna mungo HOM05D000039 ORTHO05D009263 3.1e-07 58.9 45 57.8
Medtr3g105790 Medicago truncatula HOM05D000039 ORTHO05D009263 4.0e-07 58.5 53 47.2
Peaxi162Scf00459g00127 Petunia axillaris HOM05D000039 ORTHO05D009263 4.0e-07 58.5 36 61.1
QL02p018111 Quercus lobata HOM05D000039 ORTHO05D009263 4.0e-07 58.5 37 70.3
Sc23g0006130 Simmondsia chinensis HOM05D000039 ORTHO05D009263 4.0e-07 58.5 91 35.2
Prupe.1G397400 Prunus persica HOM05D000039 ORTHO05D009263 5.3e-07 58.2 45 60.0
arahy.Tifrunner.gnm1.ann1.3M3KC8 Arachis hypogaea HOM05D000039 ORTHO05D009263 6.9e-07 57.8 46 56.5
CARHR294560 Cardamine hirsuta HOM05D000039 ORTHO05D009263 6.9e-07 57.8 46 52.2
Carub.0004s0443 Capsella rubella HOM05D000039 ORTHO05D009263 9.0e-07 57.4 46 52.2
CiPaw.07G232500 Carya illinoinensis HOM05D000039 ORTHO05D009263 9.0e-07 57.4 36 69.4
Cc08_g06730 Coffea canephora HOM05D000039 ORTHO05D009263 9.0e-07 57.4 43 58.1
Nn8g40142 Nelumbo nucifera HOM05D000039 ORTHO05D009263 9.0e-07 57.4 37 67.6
Sp4g03830 Schrenkiella parvula HOM05D000039 ORTHO05D009263 1.2e-06 57.0 46 50.0
AT2G24800 Arabidopsis thaliana HOM05D000039 ORTHO05D009263 1.5e-06 56.6 46 52.2
Lj7C738T25 Lonicera japonica HOM05D000039 ORTHO05D009263 1.5e-06 56.6 37 64.9
Aa31LG2G18570 Aethionema arabicum HOM05D000039 ORTHO05D009263 2.0e-06 56.2 46 50.0
CAN.G566.52 Capsicum annuum HOM05D000039 ORTHO05D009263 2.0e-06 56.2 37 62.2
Ca_15789_v3 Cicer arietinum L. HOM05D000039 ORTHO05D009263 2.0e-06 56.2 53 45.3
COL.COLO4_18980 Corchorus olitorius HOM05D000039 ORTHO05D009263 2.0e-06 56.2 33 75.8
THA.LOC104803606 Tarenaya hassleriana HOM05D000039 ORTHO05D009263 2.0e-06 56.2 45 48.9
Gohir.A05G061500 Gossypium hirsutum HOM05D000039 ORTHO05D009263 2.6e-06 55.8 38 65.8
Gohir.D05G064000 Gossypium hirsutum HOM05D000039 ORTHO05D009263 2.6e-06 55.8 38 65.8
Gorai.009G064700 Gossypium raimondii HOM05D000039 ORTHO05D009263 2.6e-06 55.8 38 65.8
Ah.12g060240 Amaranthus hybridus HOM05D000039 ORTHO05D009263 3.4e-06 55.5 35 65.7
AL4G15790 Arabidopsis lyrata HOM05D000039 ORTHO05D009263 3.4e-06 55.5 46 50.0
Glyma.06G060100 Glycine max HOM05D000039 ORTHO05D009263 3.4e-06 55.5 36 63.9
TWI32G1217 Tripterygium wilfordii HOM05D004741 ORTHO05D005454 3.4e-06 55.5 53 49.1
A09p56040 Brassica napus HOM05D000039 ORTHO05D009263 4.5e-06 55.1 46 50.0
A09p56100 Brassica napus HOM05D000039 ORTHO05D009263 4.5e-06 55.1 46 50.0
BraA09t41005Z Brassica rapa HOM05D000039 ORTHO05D009263 4.5e-06 55.1 46 50.0
CiPaw.08G004500 Carya illinoinensis HOM05D000039 ORTHO05D009263 4.5e-06 55.1 43 62.8
Sopen12g032360 Solanum pennellii HOM05D000039 ORTHO05D009263 4.5e-06 55.1 37 59.5
VMungo1309G1293 Vigna mungo HOM05D004741 ORTHO05D005454 4.5e-06 55.1 44 54.5
Carub.0106s0001 Capsella rubella HOM05D000039 ORTHO05D009263 5.8e-06 54.7 42 50.0
Cfa013018 Carpinus fangiana HOM05D004741 ORTHO05D005454 5.8e-06 54.7 36 66.7
Duzib168G0813 Durio zibethinus HOM05D000039 ORTHO05D009263 5.8e-06 54.7 36 69.4
Thhalv10000495m.g Eutrema salsugineum HOM05D000039 ORTHO05D009263 7.6e-06 54.3 46 47.8
unitig_92.g28138 Utricularia gibba HOM05D000039 ORTHO05D009263 7.6e-06 54.3 39 64.1
Aa31LG7G11590 Aethionema arabicum HOM05D000039 ORTHO05D009263 1.0e-05 53.9 39 56.4
CARHR239660 Cardamine hirsuta HOM05D000039 ORTHO05D009263 1.0e-05 53.9 46 47.8
Nitab4.5_0001110g0100 Nicotiana tabacum HOM05D000039 ORTHO05D009263 1.0e-05 53.9 37 59.5
Sp7g29550 Schrenkiella parvula HOM05D000039 ORTHO05D009263 1.0e-05 53.9 42 50.0


User provided reference genes

Program Settings