Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G2292 Salvia bowleyana HOM05D007368 ORTHO05D009330 7.5e-92 340.5 172 100.0
SGA_v2.0_scaffold35G14174 Striga asiatica HOM05D007368 ORTHO05D009330 2.7e-49 199.1 137 73.7
TAR623G0445 Trochodendron aralioides HOM05D007368 ORTHO05D009330 7.6e-44 181.0 122 74.6
Migut.L01655 Erythranthe guttata HOM05D007368 ORTHO05D009330 2.2e-43 179.5 138 70.3
Atru.chr8.2541 Acer truncatum HOM05D007368 ORTHO05D009330 3.8e-43 178.7 144 67.4
Haze_20668 Corylus avellana HOM05D007368 ORTHO05D009330 3.2e-42 175.6 140 67.9
GSVIVG01025542001 Vitis vinifera HOM05D007368 ORTHO05D009330 3.5e-41 172.2 145 67.6
Cfa017494 Carpinus fangiana HOM05D007368 ORTHO05D009330 4.6e-41 171.8 140 66.4
Eucgr.A01185 Eucalyptus grandis HOM05D007368 ORTHO05D009330 7.9e-41 171.0 144 65.3
MBI05_g24570_MAGBIO Magnolia biondii HOM05D007368 ORTHO05D009330 1.0e-40 170.6 133 64.7
Nn2g10623 Nelumbo nucifera HOM05D007368 ORTHO05D009330 1.8e-40 169.9 133 68.4
CsaV3_3G035440 Cucumis sativus L. HOM05D007368 ORTHO05D009330 8.7e-40 167.5 124 70.2
Ciclev10013048m.g Citrus clementina HOM05D007368 ORTHO05D009330 1.1e-39 167.2 146 61.6
Manes.08G002100 Manihot esculenta HOM05D007368 ORTHO05D009330 2.5e-39 166.0 116 73.3
Gohir.D04G116100 Gossypium hirsutum HOM05D007368 ORTHO05D009330 4.3e-39 165.2 144 61.8
Peaxi162Scf00005g05110 Petunia axillaris HOM05D007368 ORTHO05D009330 5.6e-39 164.9 136 63.2
Gohir.A04G077000 Gossypium hirsutum HOM05D007368 ORTHO05D009330 7.4e-39 164.5 144 63.2
Nitab4.5_0000848g0200 Nicotiana tabacum HOM05D007368 ORTHO05D009330 7.4e-39 164.5 140 65.7
Nitab4.5_0006316g0030 Nicotiana tabacum HOM05D007368 ORTHO05D009330 7.4e-39 164.5 137 65.0
QL07p045528 Quercus lobata HOM05D007368 ORTHO05D009330 7.4e-39 164.5 151 61.6
MELO3C009303.2 Cucumis melo HOM05D007368 ORTHO05D009330 1.6e-38 163.3 109 76.1
A09p46480 Brassica napus HOM05D007368 ORTHO05D009330 3.7e-38 162.2 138 63.0
Duzib106G0389 Durio zibethinus HOM05D007368 ORTHO05D009330 3.7e-38 162.2 138 63.8
TWI18G0236 Tripterygium wilfordii HOM05D007368 ORTHO05D009330 4.8e-38 161.8 133 60.9
Aa31LG10G9720 Aethionema arabicum HOM05D007368 ORTHO05D009330 6.2e-38 161.4 134 64.9
AL5G34390 Arabidopsis lyrata HOM05D007368 ORTHO05D009330 6.2e-38 161.4 138 60.9
Thhalv10010814m.g Eutrema salsugineum HOM05D007368 ORTHO05D009330 6.2e-38 161.4 137 64.2
RhsimUnG0119200 Rhododendron simsii HOM05D007368 ORTHO05D009330 6.2e-38 161.4 124 67.7
PGR004G1717 Punica granatum HOM05D007368 ORTHO05D009330 8.2e-38 161.0 116 71.6
CARHR163370 Cardamine hirsuta HOM05D007368 ORTHO05D009330 1.1e-37 160.6 135 63.0
BcaC07g39711 Brassica carinata HOM05D007368 ORTHO05D009330 1.8e-37 159.8 138 63.0
A07p02830 Brassica napus HOM05D007368 ORTHO05D009330 1.8e-37 159.8 139 61.2
BraA07t28082Z Brassica rapa HOM05D007368 ORTHO05D009330 1.8e-37 159.8 139 61.2
Carub.0005s2004 Capsella rubella HOM05D007368 ORTHO05D009330 1.8e-37 159.8 134 59.7
BcaB01g00269 Brassica carinata HOM05D007368 ORTHO05D009330 3.1e-37 159.1 156 55.1
BraA09t40112Z Brassica rapa HOM05D007368 ORTHO05D009330 3.1e-37 159.1 143 61.5
Sp5g08870 Schrenkiella parvula HOM05D007368 ORTHO05D009330 3.1e-37 159.1 139 62.6
C08p28830 Brassica napus HOM05D007368 ORTHO05D009330 4.0e-37 158.7 138 62.3
PSO384G2936 Papaver somniferum HOM05D007368 ORTHO05D009330 4.0e-37 158.7 114 65.8
AT3G53470 Arabidopsis thaliana HOM05D007368 ORTHO05D009330 5.3e-37 158.3 140 60.0
RcHm_v2.0_Chr3g0468451 Rosa chinensis HOM05D007368 ORTHO05D009330 5.3e-37 158.3 149 59.7
FvH4_6g15150 Fragaria vesca HOM05D007368 ORTHO05D009330 6.9e-37 157.9 143 61.5
FAN05G3151 Fragaria x ananassa HOM05D007368 ORTHO05D009330 6.9e-37 157.9 142 62.0
Zm00001eb039440 Zea mays HOM05D007368 ORTHO05D009330 6.9e-37 157.9 106 72.6
Zm00001eb039540 Zea mays HOM05D007368 ORTHO05D009330 6.9e-37 157.9 106 73.6
Thecc.05G052500 Theobroma cacao HOM05D007368 ORTHO05D009330 9.0e-37 157.5 141 61.0
MD12G1126200 Malus domestica HOM05D007368 ORTHO05D009330 1.2e-36 157.1 152 61.8
Zm00001eb039470 Zea mays HOM05D007368 ORTHO05D009330 1.2e-36 157.1 104 73.1
Prupe.6G242800 Prunus persica HOM05D007368 ORTHO05D009330 1.5e-36 156.8 154 60.4
THA.LOC104806520 Tarenaya hassleriana HOM05D007368 ORTHO05D009330 1.5e-36 156.8 115 69.6
BolC8t50485H Brassica oleracea HOM05D007368 ORTHO05D009330 2.0e-36 156.4 142 62.0
Potri.016G084000 Populus trichocarpa HOM05D007368 ORTHO05D009330 2.0e-36 156.4 116 69.8
ClCG10G020660 Citrullus lanatus HOM05D007368 ORTHO05D009330 2.6e-36 156.0 93 81.7
FAN09G3524 Fragaria x ananassa HOM05D007368 ORTHO05D009330 2.6e-36 156.0 136 62.5
Os03g0285100 Oryza sativa ssp. japonica HOM05D007368 ORTHO05D009330 2.6e-36 156.0 109 71.6
HanXRQChr07g0195701 Helianthus annuus HOM05D007368 ORTHO05D009330 3.4e-36 155.6 141 61.7
Lsat_1_v5_gn_2_109820 Lactuca sativa HOM05D007368 ORTHO05D009330 4.5e-36 155.2 144 65.3
Zm00001eb013060 Zea mays HOM05D007368 ORTHO05D009330 1.0e-35 154.1 111 72.1
EL10Ac7g17332 Beta vulgaris HOM05D007368 ORTHO05D009330 1.3e-35 153.7 132 62.1
CSS0023324 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 1.3e-35 153.7 92 81.5
FAN02G4571 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.7e-35 153.3 143 60.8
Cc06_g03400 Coffea canephora HOM05D007368 ORTHO05D009330 2.2e-35 152.9 143 62.9
FAN14G0355 Fragaria x ananassa HOM05D007368 ORTHO05D009330 2.9e-35 152.5 139 61.2
vmacro20068 Vaccinium macrocarpon HOM05D007368 ORTHO05D009330 3.8e-35 152.1 88 83.0
PSO339G6044 Papaver somniferum HOM05D007368 ORTHO05D009330 4.9e-35 151.8 114 63.2
Gorai.009G420700 Gossypium raimondii HOM05D007368 ORTHO05D009330 6.5e-35 151.4 169 52.7
CANSAT80G2753 Cannabis sativa HOM05D007368 ORTHO05D009330 1.4e-34 150.2 144 61.8
CDE07G1273 Ceratophyllum demersum HOM05D007368 ORTHO05D009330 1.4e-34 150.2 129 55.8
Aqoxy4G03165 Aquilegia oxysepala HOM05D007368 ORTHO05D009330 3.2e-34 149.1 89 78.7
Glyma.03G177200 Glycine max HOM05D007368 ORTHO05D009330 9.3e-34 147.5 124 67.7
Lj1g0027781 Lotus japonicus HOM05D007368 ORTHO05D009330 2.1e-33 146.4 87 81.6
Cpa.g.sc114.58 Carica papaya HOM05D007368 ORTHO05D009330 4.6e-33 145.2 119 66.4
AUR62002707 Chenopodium quinoa HOM05D007368 ORTHO05D009330 7.9e-33 144.4 89 80.9
Lalb_Chr01g0019071 Lupinus albus HOM05D007368 ORTHO05D009330 1.8e-32 143.3 97 73.2
Medtr7g100570 Medicago truncatula HOM05D007368 ORTHO05D009330 1.8e-32 143.3 103 68.0
Psat3g046880 Pisum sativum HOM05D007368 ORTHO05D009330 1.8e-32 143.3 142 58.5
Glyma.19G177900 Glycine max HOM05D007368 ORTHO05D009330 3.9e-32 142.1 122 68.0
Sabra16G0091100 Salix brachista HOM05D007368 ORTHO05D009330 3.9e-32 142.1 98 72.4
BcaC03g13096 Brassica carinata HOM05D007368 ORTHO05D009330 5.1e-32 141.7 132 56.8
BolC2t05999H Brassica oleracea HOM05D007368 ORTHO05D009330 5.1e-32 141.7 132 56.8
VMungo1383G1325 Vigna mungo HOM05D007368 ORTHO05D009330 2.5e-31 139.4 113 69.0
HPP92_003604 Vanilla planifolia HOM05D007368 ORTHO05D009330 3.3e-31 139.0 110 63.6
Medtr7g061255 Medicago truncatula HOM05D007368 ORTHO05D009330 5.7e-31 138.3 87 77.0
Sc20g0004140 Simmondsia chinensis HOM05D007368 ORTHO05D009330 9.7e-31 137.5 96 72.9
Phvul.001G174100 Phaseolus vulgaris HOM05D007368 ORTHO05D009330 1.3e-30 137.1 89 80.9
Sopen09g002110 Solanum pennellii HOM05D007368 ORTHO05D009330 1.3e-30 137.1 139 56.8
CSS0022034 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 1.6e-30 136.7 94 75.5
Solyc09g007240.3 Solanum lycopersicum HOM05D007368 ORTHO05D009330 4.8e-30 135.2 139 56.1
arahy.Tifrunner.gnm1.ann1.FER711 Arachis hypogaea HOM05D007368 ORTHO05D009330 1.2e-28 130.6 73 82.2
arahy.Tifrunner.gnm1.ann1.XWNT9U Arachis hypogaea HOM05D007368 ORTHO05D009330 1.3e-27 127.1 70 82.9
Dinv37241 Davidia involucrata HOM05D007368 ORTHO05D009330 1.1e-26 124.0 74 75.7
Actinidia11231 Actinidia chinensis HOM05D007368 ORTHO05D009330 2.7e-25 119.4 120 55.8
AUR62030166 Chenopodium quinoa HOM05D007368 ORTHO05D009330 2.7e-25 119.4 65 83.1
Sed0014476 Sechium edule HOM05D007368 ORTHO05D009330 2.2e-22 109.8 90 64.4
CSS0036054 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 1.8e-21 106.7 88 67.0
SEGI_06625 Sequoiadendron giganteum HOM05D007368 ORTHO05D009330 4.1e-21 105.5 104 52.9
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 3.2e-18 95.9 74 63.5
Mapoly0019s0018 Marchantia polymorpha HOM05D007368 ORTHO05D009330 2.0e-12 76.6 82 46.3
TAR369G0858 Trochodendron aralioides HOM05D000391 ORTHO05D011523 5.0e-11 72.0 46 69.6
Pp3c5_6130 Physcomitrium patens HOM05D007368 ORTHO05D009330 5.5e-10 68.6 111 36.0
SMO180G0004 Selaginella moellendorffii HOM05D007368 ORTHO05D009330 4.7e-09 65.5 79 41.8


User provided reference genes

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