Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G2286 Salvia bowleyana HOM05D007220 ORTHO05D009058 1.5e-88 329.7 190 100.0
MSTRG.27183 Avicennia marina HOM05D007220 ORTHO05D009058 6.9e-54 214.5 195 69.7
SGA_v2.0_scaffold2G01175 Striga asiatica HOM05D007220 ORTHO05D009058 1.1e-51 207.2 192 70.8
SGA_v2.0_scaffold486G52391 Striga asiatica HOM05D007220 ORTHO05D009058 7.3e-48 194.5 194 60.3
Dinv28549 Davidia involucrata HOM05D007220 ORTHO05D009058 4.2e-43 178.7 205 54.6
Migut.F00451 Erythranthe guttata HOM05D007220 ORTHO05D009058 3.5e-42 175.6 194 61.9
GSVIVG01018558001 Vitis vinifera HOM05D007220 ORTHO05D009058 3.9e-41 172.2 169 59.2
Peaxi162Scf00241g00624 Petunia axillaris HOM05D007220 ORTHO05D009058 7.4e-40 167.9 180 58.9
Actinidia25024 Actinidia chinensis HOM05D007220 ORTHO05D009058 1.6e-39 166.8 187 63.6
unitig_46.g18768 Utricularia gibba HOM05D007220 ORTHO05D009058 3.7e-39 165.6 185 54.1
Potri.015G129600 Populus trichocarpa HOM05D007220 ORTHO05D009058 1.8e-38 163.3 191 60.2
Nitab4.5_0000072g0560 Nicotiana tabacum HOM05D007220 ORTHO05D009058 3.1e-38 162.5 175 64.6
CiPaw.04G061800 Carya illinoinensis HOM05D007220 ORTHO05D009058 5.3e-38 161.8 197 56.3
Eucgr.A02878 Eucalyptus grandis HOM05D007220 ORTHO05D009058 6.9e-38 161.4 163 61.3
Manes.14G034000 Manihot esculenta HOM05D007220 ORTHO05D009058 6.9e-38 161.4 194 52.1
Thecc.03G158900 Theobroma cacao HOM05D007220 ORTHO05D009058 6.9e-38 161.4 200 58.0
CAN.G152.17 Capsicum annuum HOM05D007220 ORTHO05D009058 1.2e-37 160.6 109 75.2
Cc02_g04040 Coffea canephora HOM05D007220 ORTHO05D009058 1.5e-37 160.2 213 49.3
Nitab4.5_0001548g0050 Nicotiana tabacum HOM05D007220 ORTHO05D009058 1.5e-37 160.2 179 55.9
ClCG05G007450 Citrullus lanatus HOM05D007220 ORTHO05D009058 2.6e-37 159.5 185 54.1
AUR62016183 Chenopodium quinoa HOM05D007220 ORTHO05D009058 3.4e-37 159.1 186 54.3
Cpa.g.sc3.292 Carica papaya HOM05D007220 ORTHO05D009058 4.5e-37 158.7 106 73.6
TWI39G1186 Tripterygium wilfordii HOM05D007220 ORTHO05D009058 4.5e-37 158.7 189 51.3
arahy.Tifrunner.gnm1.ann1.0IXC5E Arachis hypogaea HOM05D007220 ORTHO05D009058 1.0e-36 157.5 103 73.8
Haze_13838 Corylus avellana HOM05D007220 ORTHO05D009058 2.9e-36 156.0 199 50.8
Gohir.D07G043100 Gossypium hirsutum HOM05D007220 ORTHO05D009058 2.9e-36 156.0 99 76.8
Gohir.A07G038900 Gossypium hirsutum HOM05D007220 ORTHO05D009058 4.9e-36 155.2 99 76.8
Gorai.001G046100 Gossypium raimondii HOM05D007220 ORTHO05D009058 4.9e-36 155.2 99 76.8
Sabra15G0142900 Salix brachista HOM05D007220 ORTHO05D009058 6.5e-36 154.8 191 58.1
Cfa008220 Carpinus fangiana HOM05D007220 ORTHO05D009058 8.4e-36 154.5 198 53.5
PGR042G1708 Punica granatum HOM05D007220 ORTHO05D009058 8.4e-36 154.5 191 59.7
QL09p019051 Quercus lobata HOM05D007220 ORTHO05D009058 8.4e-36 154.5 199 57.8
Glyma.09G232600 Glycine max HOM05D007220 ORTHO05D009058 1.4e-35 153.7 152 55.9
COL.COLO4_14153 Corchorus olitorius HOM05D007220 ORTHO05D009058 1.9e-35 153.3 198 58.1
Solyc03g083570.3 Solanum lycopersicum HOM05D007220 ORTHO05D009058 1.9e-35 153.3 110 72.7
Sopen03g023380 Solanum pennellii HOM05D007220 ORTHO05D009058 1.9e-35 153.3 110 72.7
Duzib205G1715 Durio zibethinus HOM05D007220 ORTHO05D009058 3.2e-35 152.5 196 52.0
MELO3C006826.2 Cucumis melo HOM05D007220 ORTHO05D009058 7.1e-35 151.4 185 53.0
MD01G1184500 Malus domestica HOM05D007220 ORTHO05D009058 1.2e-34 150.6 196 50.5
CsaV3_3G016270 Cucumis sativus L. HOM05D007220 ORTHO05D009058 2.1e-34 149.8 178 52.8
Dinv22967 Davidia involucrata HOM05D007220 ORTHO05D009058 3.5e-34 149.1 210 47.6
Sc19g0001910 Simmondsia chinensis HOM05D007220 ORTHO05D009058 6.0e-34 148.3 184 50.5
HanXRQChr08g0223851 Helianthus annuus HOM05D007220 ORTHO05D009058 7.9e-34 147.9 181 48.6
CSS0026352 Camellia sinensis var. sinensis HOM05D007220 ORTHO05D009058 1.0e-33 147.5 101 76.2
FvH4_7g27960 Fragaria vesca HOM05D007220 ORTHO05D009058 1.0e-33 147.5 165 50.9
vmacro09892 Vaccinium macrocarpon HOM05D007220 ORTHO05D009058 1.0e-33 147.5 202 49.0
FAN06G4318 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.3e-33 147.1 165 50.9
FAN10G3220 Fragaria x ananassa HOM05D007220 ORTHO05D009058 3.0e-33 146.0 165 55.8
THA.LOC104811513 Tarenaya hassleriana HOM05D007220 ORTHO05D009058 3.0e-33 146.0 182 56.0
Lsat_1_v5_gn_8_9340 Lactuca sativa HOM05D007220 ORTHO05D009058 3.9e-33 145.6 185 51.4
FAN06G0674 Fragaria x ananassa HOM05D007220 ORTHO05D009058 6.7e-33 144.8 165 55.8
Lj8A39T34 Lonicera japonica HOM05D007220 ORTHO05D009058 1.5e-32 143.7 105 69.5
Nn4g26358 Nelumbo nucifera HOM05D007220 ORTHO05D009058 1.9e-32 143.3 176 47.2
RcHm_v2.0_Chr1g0374911 Rosa chinensis HOM05D007220 ORTHO05D009058 1.9e-32 143.3 168 50.0
FAN03G0488 Fragaria x ananassa HOM05D007220 ORTHO05D009058 2.5e-32 142.9 161 50.9
FAN03G2818 Fragaria x ananassa HOM05D007220 ORTHO05D009058 2.5e-32 142.9 161 50.9
EL10Ac3g05813 Beta vulgaris HOM05D007220 ORTHO05D009058 5.7e-32 141.7 197 47.7
Atru.chr1.664 Acer truncatum HOM05D007220 ORTHO05D009058 7.4e-32 141.4 192 53.6
BraA03t10902Z Brassica rapa HOM05D007220 ORTHO05D009058 7.4e-32 141.4 191 46.6
Ciclev10005924m.g Citrus clementina HOM05D007220 ORTHO05D009058 9.6e-32 141.0 102 68.6
FAN01G2832 Fragaria x ananassa HOM05D007220 ORTHO05D009058 9.6e-32 141.0 165 54.5
VMungo1127G0384 Vigna mungo HOM05D007220 ORTHO05D009058 1.3e-31 140.6 139 62.6
BcaC01g06128 Brassica carinata HOM05D007220 ORTHO05D009058 1.6e-31 140.2 184 48.9
C03p18980 Brassica napus HOM05D007220 ORTHO05D009058 1.6e-31 140.2 184 48.9
BolC3t14287H Brassica oleracea HOM05D007220 ORTHO05D009058 1.6e-31 140.2 184 48.9
Phvul.011G004500 Phaseolus vulgaris HOM05D007220 ORTHO05D009058 1.6e-31 140.2 101 67.3
Medtr4g035825 Medicago truncatula HOM05D007220 ORTHO05D009058 2.8e-31 139.4 176 48.3
AT5G51545 Arabidopsis thaliana HOM05D007220 ORTHO05D009058 3.7e-31 139.0 190 46.8
Carub.0008s1158 Capsella rubella HOM05D007220 ORTHO05D009058 1.1e-30 137.5 188 48.4
Ca_30916_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 1.1e-30 137.5 174 51.7
AL8G25850 Arabidopsis lyrata HOM05D007220 ORTHO05D009058 1.4e-30 137.1 194 46.9
BcaB01g04168 Brassica carinata HOM05D007220 ORTHO05D009058 1.8e-30 136.7 184 53.8
CARHR264320 Cardamine hirsuta HOM05D007220 ORTHO05D009058 2.4e-30 136.3 106 65.1
Rhsim09G0192800 Rhododendron simsii HOM05D007220 ORTHO05D009058 5.3e-30 135.2 207 47.8
Aqoxy7G00673 Aquilegia oxysepala HOM05D007220 ORTHO05D009058 1.2e-29 134.0 102 62.7
ECA233G2338 Erigeron canadensis HOM05D007220 ORTHO05D009058 2.0e-29 133.3 191 47.6
Lj3g0016008 Lotus japonicus HOM05D007220 ORTHO05D009058 2.9e-28 129.4 179 46.4
Sp6g13740 Schrenkiella parvula HOM05D007220 ORTHO05D009058 2.9e-28 129.4 184 50.0
A03p16110 Brassica napus HOM05D007220 ORTHO05D009058 1.4e-27 127.1 190 51.6
CDE09G0763 Ceratophyllum demersum HOM05D007220 ORTHO05D009058 1.9e-27 126.7 127 55.1
Psat7g150000 Pisum sativum HOM05D007220 ORTHO05D009058 2.5e-27 126.3 139 55.4
Aa31LG3G7960 Aethionema arabicum HOM05D007220 ORTHO05D009058 7.2e-27 124.8 184 53.3
arahy.Tifrunner.gnm1.ann1.83G6QR Arachis hypogaea HOM05D007220 ORTHO05D009058 7.2e-27 124.8 85 69.4
PSO782G3417 Papaver somniferum HOM05D007220 ORTHO05D009058 4.6e-26 122.1 105 56.2
SEGI_29714 Sequoiadendron giganteum HOM05D007220 ORTHO05D009058 1.3e-25 120.6 99 62.6
PSO478G4327 Papaver somniferum HOM05D007220 ORTHO05D009058 2.3e-25 119.8 105 54.3
PGSC0003DMG400023001 Solanum tuberosum HOM05D007220 ORTHO05D009058 3.9e-25 119.0 177 44.1
HPP92_002073 Vanilla planifolia HOM05D007220 ORTHO05D009058 3.3e-24 115.9 102 56.9
AUR62035102 Chenopodium quinoa HOM05D007220 ORTHO05D009058 3.7e-23 112.5 185 44.3
Zm00001eb230760 Zea mays HOM05D007220 ORTHO05D009058 3.7e-23 112.5 122 54.9
Potri.012G128000 Populus trichocarpa HOM05D007220 ORTHO05D009058 3.4e-21 105.9 193 49.7
ATR0730G016 Amborella trichopoda HOM05D007220 ORTHO05D009058 5.0e-20 102.1 102 56.9
TPR.G15117 Trifolium pratense HOM05D007220 ORTHO05D009058 1.4e-19 100.5 103 53.4
DCAR_009422 Daucus carota HOM05D007220 ORTHO05D009058 8.2e-15 84.7 145 37.9
DCAR_009423 Daucus carota HOM05D007220 ORTHO05D009058 8.2e-15 84.7 145 37.9
Pp3c26_11240 Physcomitrium patens HOM05D007220 ORTHO05D009058 1.4e-14 84.0 100 49.0
AagrBONN_evm.TU.Sc2ySwM_228.5821 Anthoceros agrestis HOM05D007220 ORTHO05D009058 9.1e-14 81.3 103 44.7
MD07G1256600 Malus domestica HOM05D007220 ORTHO05D009058 1.5e-13 80.5 50 76.0
Sed0003033 Sechium edule HOM05D007220 ORTHO05D009058 5.9e-13 78.6 149 42.3
Mapoly0002s0242 Marchantia polymorpha HOM05D007220 ORTHO05D009058 2.9e-12 76.3 77 46.8
HanXRQChr04g0107801 Helianthus annuus HOM05D000901 ORTHO05D001160 1.4e-11 73.9 128 38.3
Prupe.2G280700 Prunus persica HOM05D007220 ORTHO05D009058 3.2e-11 72.8 149 38.9
MBI12_g20320_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 5.5e-11 72.0 200 35.5
Ca_20051_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 2.7e-10 69.7 131 44.3
TAR629G2293 Trochodendron aralioides HOM05D007220 ORTHO05D009058 3.6e-10 69.3 129 38.8
MBI12_g14970_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 5.7e-08 62.0 60 51.7
MBI12_g25331_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 5.3e-06 55.5 148 39.2


User provided reference genes

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