Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G2275 Salvia bowleyana HOM05D007231 ORTHO05D009024 1.5e-141 506.1 249 100.0
MSTRG.18222 Avicennia marina HOM05D007231 ORTHO05D009024 3.1e-107 392.1 251 77.7
Migut.D00275 Erythranthe guttata HOM05D007231 ORTHO05D009024 5.0e-105 384.8 252 77.4
Rhsim13G0023500 Rhododendron simsii HOM05D007231 ORTHO05D009024 3.0e-102 375.6 251 73.3
Actinidia00741 Actinidia chinensis HOM05D007231 ORTHO05D009024 4.4e-101 371.7 251 72.9
CAN.G609.11 Capsicum annuum HOM05D007231 ORTHO05D009024 1.7e-100 369.8 251 74.5
Nitab4.5_0001028g0140 Nicotiana tabacum HOM05D007231 ORTHO05D009024 2.9e-100 369.0 252 74.2
Peaxi162Scf00570g00058 Petunia axillaris HOM05D007231 ORTHO05D009024 1.4e-99 366.7 251 72.1
Actinidia09146 Actinidia chinensis HOM05D007231 ORTHO05D009024 4.1e-99 365.2 251 71.7
Dinv11248 Davidia involucrata HOM05D007231 ORTHO05D009024 1.2e-98 363.6 251 72.1
SGA_v2.0_scaffold11G05804 Striga asiatica HOM05D002055 ORTHO05D002120 5.9e-98 361.3 259 69.1
Cc01_g19680 Coffea canephora HOM05D007231 ORTHO05D009024 7.8e-98 360.9 251 70.5
Sopen09g026640 Solanum pennellii HOM05D007231 ORTHO05D009024 7.8e-98 360.9 251 72.5
Dinv32951 Davidia involucrata HOM05D007231 ORTHO05D009024 1.0e-97 360.5 254 71.3
Solyc09g064930.3 Solanum lycopersicum HOM05D007231 ORTHO05D009024 8.6e-97 357.5 251 71.3
CiPaw.08G104200 Carya illinoinensis HOM05D007231 ORTHO05D009024 3.3e-96 355.5 251 68.9
Nitab4.5_0002386g0100 Nicotiana tabacum HOM05D002055 ORTHO05D009024 9.5e-96 354.0 250 72.8
TAR636G3122 Trochodendron aralioides HOM05D007231 ORTHO05D009024 9.5e-96 354.0 251 70.1
Gohir.D08G077400 Gossypium hirsutum HOM05D007231 ORTHO05D009024 4.0e-94 348.6 251 68.1
TAR365G1202 Trochodendron aralioides HOM05D007231 ORTHO05D009024 4.0e-94 348.6 251 69.3
SGA_v2.0_scaffold1G00456 Striga asiatica HOM05D007231 ORTHO05D009024 6.8e-94 347.8 251 70.5
Gorai.004G082300 Gossypium raimondii HOM05D007231 ORTHO05D009024 8.9e-94 347.4 251 68.1
vmacro02556 Vaccinium macrocarpon HOM05D007231 ORTHO05D009024 8.9e-94 347.4 251 68.1
GSVIVG01011110001 Vitis vinifera HOM05D007231 ORTHO05D009024 4.4e-93 345.1 249 67.9
COL.COLO4_09128 Corchorus olitorius HOM05D007231 ORTHO05D009024 5.8e-93 344.7 251 66.5
Thecc.01G282400 Theobroma cacao HOM05D007231 ORTHO05D009024 5.8e-93 344.7 251 67.3
Gohir.A08G069100 Gossypium hirsutum HOM05D007231 ORTHO05D009024 9.8e-93 344.0 251 67.7
Cfa006118 Carpinus fangiana HOM05D007231 ORTHO05D009024 2.9e-92 342.4 256 65.6
QL12p022281 Quercus lobata HOM05D007231 ORTHO05D009024 3.7e-92 342.0 248 66.9
Atru.chr5.1389 Acer truncatum HOM05D007231 ORTHO05D009024 4.9e-92 341.7 251 64.9
Duzib211G0396 Durio zibethinus HOM05D007231 ORTHO05D009024 4.1e-91 338.6 251 65.7
Manes.05G074400 Manihot esculenta HOM05D007231 ORTHO05D009024 9.2e-91 337.4 251 65.3
Lj2C1175G18 Lonicera japonica HOM05D007231 ORTHO05D009024 1.2e-90 337.0 316 58.5
Cpa.g.sc64.168 Carica papaya HOM05D007231 ORTHO05D009024 1.7e-89 333.2 249 65.1
Nn1g02166 Nelumbo nucifera HOM05D007231 ORTHO05D009024 6.6e-89 331.3 249 66.3
Oeu015959.1 Olea europaea HOM05D007231 ORTHO05D009024 1.9e-88 329.7 226 71.7
Oeu022878.1 Olea europaea HOM05D007231 ORTHO05D009024 2.5e-88 329.3 226 71.2
Sabra19G0055900 Salix brachista HOM05D007231 ORTHO05D009024 7.3e-88 327.8 249 64.7
Ciclev10021857m.g Citrus clementina HOM05D007231 ORTHO05D009024 1.2e-87 327.0 252 62.7
Potri.019G046400 Populus trichocarpa HOM05D007231 ORTHO05D009024 4.7e-87 325.1 249 65.1
CANSAT25G1925 Cannabis sativa HOM05D007231 ORTHO05D009024 1.5e-85 320.1 251 62.9
PSO210G0158 Papaver somniferum HOM05D007231 ORTHO05D009024 4.4e-85 318.5 249 63.9
Eucgr.K03384 Eucalyptus grandis HOM05D007231 ORTHO05D009024 2.2e-84 316.2 226 68.1
MBI19_g24716_MAGBIO Magnolia biondii HOM05D007231 ORTHO05D009024 2.2e-84 316.2 246 63.4
Prupe.8G243400 Prunus persica HOM05D007231 ORTHO05D009024 2.2e-84 316.2 251 62.9
HanXRQChr01g0002311 Helianthus annuus HOM05D007231 ORTHO05D009024 3.7e-84 315.5 250 61.2
THA.LOC104801225 Tarenaya hassleriana HOM05D007231 ORTHO05D009024 4.9e-84 315.1 250 62.0
arahy.Tifrunner.gnm1.ann1.9UA39Y Arachis hypogaea HOM05D007231 ORTHO05D009024 6.4e-84 314.7 251 62.5
arahy.Tifrunner.gnm1.ann1.LJDI86 Arachis hypogaea HOM05D007231 ORTHO05D009024 6.4e-84 314.7 251 62.5
Lalb_Chr06g0163091 Lupinus albus HOM05D007231 ORTHO05D009024 1.9e-83 313.2 245 63.3
Lsat_1_v5_gn_5_190100 Lactuca sativa HOM05D007231 ORTHO05D009024 3.2e-83 312.4 248 61.7
Lj5g0005680 Lotus japonicus HOM05D007231 ORTHO05D009024 3.2e-83 312.4 246 63.0
HanXRQChr11g0327631 Helianthus annuus HOM05D007231 ORTHO05D009024 7.1e-83 311.2 249 60.6
RcHm_v2.0_Chr6g0291381 Rosa chinensis HOM05D007231 ORTHO05D009024 7.1e-83 311.2 253 61.3
MD11G1288600 Malus domestica HOM05D007231 ORTHO05D009024 1.6e-82 310.1 253 61.7
Lalb_Chr02g0142831 Lupinus albus HOM05D007231 ORTHO05D009024 2.1e-82 309.7 245 62.0
unitig_0.g109 Utricularia gibba HOM05D007231 ORTHO05D009024 3.5e-82 308.9 213 70.0
Sp1g02240 Schrenkiella parvula HOM05D007231 ORTHO05D009024 4.6e-82 308.5 252 61.9
Glyma.10G025400 Glycine max HOM05D007231 ORTHO05D009024 7.8e-82 307.8 246 62.6
Aa31LG1G9290 Aethionema arabicum HOM05D007231 ORTHO05D009024 1.7e-81 306.6 252 61.5
CsaV3_7G028660 Cucumis sativus L. HOM05D007231 ORTHO05D009024 2.3e-81 306.2 250 61.2
FvH4_2g23810 Fragaria vesca HOM05D007231 ORTHO05D009024 2.3e-81 306.2 254 62.2
AL1G12740 Arabidopsis lyrata HOM05D007231 ORTHO05D009024 3.0e-81 305.8 250 60.8
Thhalv10008549m.g Eutrema salsugineum HOM05D007231 ORTHO05D009024 3.0e-81 305.8 256 60.2
Psat6g125920 Pisum sativum HOM05D007231 ORTHO05D009024 5.1e-81 305.1 246 62.2
CARHR002550 Cardamine hirsuta HOM05D007231 ORTHO05D009024 8.6e-81 304.3 251 60.2
BraA10t42455Z Brassica rapa HOM05D007231 ORTHO05D009024 1.1e-80 303.9 251 61.4
ECA248G0248 Erigeron canadensis HOM05D002055 ORTHO05D002120 1.5e-80 303.5 248 61.7
BcaC05g24637 Brassica carinata HOM05D007231 ORTHO05D009024 1.9e-80 303.1 251 61.8
AT1G03250 Arabidopsis thaliana HOM05D007231 ORTHO05D009024 2.5e-80 302.8 250 59.6
Hund05352 Selenicereus undatus HOM05D007231 ORTHO05D009024 2.5e-80 302.8 250 61.6
AUR62036799 Chenopodium quinoa HOM05D007231 ORTHO05D009024 3.3e-80 302.4 278 56.8
A10p01800 Brassica napus HOM05D007231 ORTHO05D009024 5.6e-80 301.6 251 61.4
Phvul.007G170300 Phaseolus vulgaris HOM05D007231 ORTHO05D009024 5.6e-80 301.6 245 62.0
Aqoxy2G03271 Aquilegia oxysepala HOM05D007231 ORTHO05D009024 1.2e-79 300.4 240 61.7
BcaC05g24551 Brassica carinata HOM05D007231 ORTHO05D009024 1.2e-79 300.4 251 60.2
FAN27G1680 Fragaria x ananassa HOM05D007231 ORTHO05D009024 1.6e-79 300.1 261 60.5
C05p01780 Brassica napus HOM05D007231 ORTHO05D009024 2.1e-79 299.7 262 59.2
Carub.0001s0236 Capsella rubella HOM05D007231 ORTHO05D009024 2.1e-79 299.7 222 65.3
MELO3C015851.2 Cucumis melo HOM05D007231 ORTHO05D009024 2.8e-79 299.3 250 60.4
EL10Ac7g17220 Beta vulgaris HOM05D007231 ORTHO05D009024 4.7e-79 298.5 302 52.6
Ca_09766_v3 Cicer arietinum L. HOM05D002055 ORTHO05D002120 3.1e-78 295.8 243 61.3
BolC5t28956H Brassica oleracea HOM05D007231 ORTHO05D009024 5.2e-78 295.0 258 59.7
Medtr1g072510 Medicago truncatula HOM05D007231 ORTHO05D009024 1.2e-77 293.9 230 62.6
VMungo0720G1677 Vigna mungo HOM05D002055 ORTHO05D002120 9.9e-77 290.8 217 65.9
CSS0040014 Camellia sinensis var. sinensis HOM05D007231 ORTHO05D009024 1.7e-76 290.0 190 73.2
Sed0024964 Sechium edule HOM05D002055 ORTHO05D002120 1.1e-75 287.3 235 61.3
CDE04G0796 Ceratophyllum demersum HOM05D007231 ORTHO05D009024 8.7e-73 277.7 225 60.0
FAN20G2044 Fragaria x ananassa HOM05D007231 ORTHO05D009024 1.1e-72 277.3 302 52.3
PGR044G2216 Punica granatum HOM05D007231 ORTHO05D009024 8.1e-71 271.2 188 69.1
Os11g0147100 Oryza sativa ssp. japonica HOM05D007231 ORTHO05D009024 5.2e-70 268.5 248 54.8
TWI14G0923 Tripterygium wilfordii HOM05D002055 ORTHO05D002120 5.2e-70 268.5 200 65.5
Os12g0144000 Oryza sativa ssp. japonica HOM05D007231 ORTHO05D009024 9.0e-70 267.7 245 55.9
Duzib138G1636 Durio zibethinus HOM05D007231 ORTHO05D009024 1.7e-68 263.5 251 57.0
Zm00001eb196600 Zea mays HOM05D007231 ORTHO05D009024 2.9e-68 262.7 248 54.4
ATR0626G005 Amborella trichopoda HOM05D007231 ORTHO05D009024 1.9e-67 260.0 212 57.1
ClCG09G006940 Citrullus lanatus HOM05D002055 ORTHO05D002120 3.2e-67 259.2 198 62.6
Zm00001eb342980 Zea mays HOM05D007231 ORTHO05D009024 4.2e-67 258.8 246 53.7
Ciclev10022442m.g Citrus clementina HOM05D007231 ORTHO05D009024 7.1e-67 258.1 188 63.8
HPP92_016066 Vanilla planifolia HOM05D006695 ORTHO05D008239 7.9e-58 228.0 206 55.8
AUR62039907 Chenopodium quinoa HOM05D007231 ORTHO05D009024 2.1e-55 219.9 191 57.6
Sc05g0004910 Simmondsia chinensis HOM05D007231 ORTHO05D009024 2.0e-53 213.4 165 63.6
SEGI_15193 Sequoiadendron giganteum HOM05D007231 ORTHO05D009024 4.1e-38 162.5 216 41.2
TPR.G19967 Trifolium pratense HOM05D007231 ORTHO05D009024 7.9e-34 148.3 121 60.3
Mapoly0057s0044 Marchantia polymorpha HOM05D007231 ORTHO05D009024 1.4e-27 127.5 208 38.9
SMO137G0298 Selaginella moellendorffii HOM05D007231 ORTHO05D009024 3.6e-26 122.9 209 37.8
SMO170G0043 Selaginella moellendorffii HOM05D007231 ORTHO05D009024 7.9e-26 121.7 209 37.3
AagrBONN_evm.TU.Sc2ySwM_117.667 Anthoceros agrestis HOM05D007231 ORTHO05D009024 4.1e-22 109.4 206 31.1
Cc01_g19320 Coffea canephora HOM05D007231 ORTHO05D009024 4.5e-21 105.9 137 47.4
MCO13G326 Micromonas commoda HOM05D007231 ORTHO05D009024 1.7e-20 104.0 192 33.3
Pp3c4_28170 Physcomitrium patens HOM05D007231 ORTHO05D009024 7.2e-19 98.6 202 33.2
Cre01.g040100 Chlamydomonas reinhardtii HOM05D007231 ORTHO05D009024 9.4e-19 98.2 163 35.0
BcaC05g24635 Brassica carinata HOM05D007231 ORTHO05D009024 1.4e-17 94.4 79 54.4
CDE02G1070 Ceratophyllum demersum HOM05D007231 ORTHO05D009024 1.2e-13 81.3 135 37.0
TPR.G24733 Trifolium pratense HOM05D007231 ORTHO05D009024 8.5e-12 75.1 61 60.7
CDE02G2493 Ceratophyllum demersum HOM05D007231 ORTHO05D009024 4.2e-11 72.8 67 53.7
TPR.G17639 Trifolium pratense HOM05D007231 ORTHO05D009024 8.2e-07 58.5 45 57.8
TPR.G23952 Trifolium pratense HOM05D007231 ORTHO05D009024 8.2e-07 58.5 45 57.8


User provided reference genes

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