Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G2218 Salvia bowleyana HOM05D002465 ORTHO05D005308 0.0e+00 1107.0 568 100.0
Migut.F00281 Erythranthe guttata HOM05D002465 ORTHO05D005308 1.9e-245 852.4 569 74.0
SGA_v2.0_scaffold60G21117 Striga asiatica HOM05D002465 ORTHO05D005308 8.8e-222 773.9 615 63.9
Oeu036031.1 Olea europaea HOM05D002465 ORTHO05D005308 2.2e-209 732.6 575 64.7
CAN.G290.13 Capsicum annuum HOM05D002465 ORTHO05D005308 3.8e-209 731.9 595 61.3
Nitab4.5_0008234g0010 Nicotiana tabacum HOM05D002465 ORTHO05D005308 3.2e-208 728.8 570 65.1
Nitab4.5_0007593g0010 Nicotiana tabacum HOM05D002465 ORTHO05D005308 4.7e-207 724.9 576 64.4
Sopen12g022610 Solanum pennellii HOM05D002465 ORTHO05D005308 6.7e-206 721.1 576 64.1
Actinidia34161 Actinidia chinensis HOM05D002465 ORTHO05D005308 5.7e-205 718.0 588 62.6
Cc02_g02290 Coffea canephora HOM05D002465 ORTHO05D005308 1.2e-202 710.3 611 59.6
Dinv35264 Davidia involucrata HOM05D002465 ORTHO05D005308 2.0e-202 709.5 594 60.4
QL09p012529 Quercus lobata HOM05D002465 ORTHO05D005308 1.3e-201 706.8 594 61.1
GSVIVG01028829001 Vitis vinifera HOM05D002465 ORTHO05D005308 8.5e-201 704.1 583 61.1
Haze_00055 Corylus avellana HOM05D002465 ORTHO05D005308 2.0e-194 682.9 604 58.4
Prupe.2G301900 Prunus persica HOM05D002465 ORTHO05D005308 1.0e-193 680.6 574 61.3
MD01G1209800 Malus domestica HOM05D002465 ORTHO05D005308 1.3e-193 680.2 569 60.5
Potri.017G148000 Populus trichocarpa HOM05D002465 ORTHO05D005308 8.6e-193 677.6 578 60.7
RcHm_v2.0_Chr1g0378531 Rosa chinensis HOM05D002465 ORTHO05D005308 8.6e-193 677.6 564 61.7
Gorai.008G274000 Gossypium raimondii HOM05D002465 ORTHO05D005308 1.0e-190 670.6 591 58.7
Thecc.03G185500 Theobroma cacao HOM05D002465 ORTHO05D005308 1.4e-190 670.2 613 56.1
HanXRQChr15g0494161 Helianthus annuus HOM05D002465 ORTHO05D005308 2.3e-190 669.5 568 61.1
Sc13g0009230 Simmondsia chinensis HOM05D002465 ORTHO05D005308 2.3e-190 669.5 567 58.2
Eucgr.A02722 Eucalyptus grandis HOM05D002465 ORTHO05D005308 3.0e-190 669.1 554 61.0
FAN06G0430 Fragaria x ananassa HOM05D002465 ORTHO05D005308 3.0e-190 669.1 572 61.0
ECA232G4104 Erigeron canadensis HOM05D002465 ORTHO05D005308 4.0e-190 668.7 588 59.2
FAN06G3650 Fragaria x ananassa HOM05D002465 ORTHO05D005308 5.2e-190 668.3 572 61.0
Manes.06G153300 Manihot esculenta HOM05D002465 ORTHO05D005308 1.5e-189 666.8 596 59.7
FvH4_7g30390 Fragaria vesca HOM05D002465 ORTHO05D005308 2.0e-189 666.4 563 61.1
FAN10G1194 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.6e-189 666.0 572 61.0
EL10Ac3g05400 Beta vulgaris HOM05D002465 ORTHO05D005308 4.4e-189 665.2 577 58.1
Sabra17G0123700 Salix brachista HOM05D002465 ORTHO05D005308 6.3e-188 661.4 584 59.6
THA.LOC104811947 Tarenaya hassleriana HOM05D002465 ORTHO05D005308 2.4e-187 659.4 559 59.0
DCAR_008895 Daucus carota HOM05D002465 ORTHO05D005308 1.2e-186 657.1 613 56.6
TWI23G1289 Tripterygium wilfordii HOM05D002465 ORTHO05D005308 2.7e-186 656.0 575 57.9
Ciclev10006841m.g Citrus clementina HOM05D002465 ORTHO05D005308 3.5e-186 655.6 577 58.9
Lsat_1_v5_gn_9_56800 Lactuca sativa HOM05D002465 ORTHO05D005308 3.5e-186 655.6 566 59.5
TAR374G1583 Trochodendron aralioides HOM05D002465 ORTHO05D005308 1.3e-185 653.7 517 62.9
Sabra17G0123300 Salix brachista HOM05D002465 ORTHO05D005308 2.3e-185 652.9 589 58.1
AUR62021107 Chenopodium quinoa HOM05D002465 ORTHO05D005308 2.9e-185 652.5 560 59.6
Cpa.g.sc107.121 Carica papaya HOM05D002465 ORTHO05D005308 6.6e-185 651.4 593 57.7
unitig_52.g17726 Utricularia gibba HOM05D002465 ORTHO05D005308 8.6e-185 651.0 552 60.9
COL.COLO4_30301 Corchorus olitorius HOM05D002465 ORTHO05D005308 1.5e-184 650.2 594 57.6
Gohir.D12G255900 Gossypium hirsutum HOM05D002465 ORTHO05D005308 1.5e-184 650.2 572 59.1
Hund04793 Selenicereus undatus HOM05D002465 ORTHO05D005308 1.9e-184 649.8 577 56.8
Cfa016295 Carpinus fangiana HOM05D002465 ORTHO05D005308 5.6e-184 648.3 555 59.6
AUR62031432 Chenopodium quinoa HOM05D002465 ORTHO05D005308 4.7e-183 645.2 560 59.5
Duzib205G0901 Durio zibethinus HOM05D002465 ORTHO05D005308 4.7e-183 645.2 590 56.9
FAN03G3136 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.1e-183 644.8 594 57.9
Medtr6g052330 Medicago truncatula HOM05D002465 ORTHO05D005308 6.1e-183 644.8 612 54.4
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 1.8e-182 643.3 479 65.3
FAN10G1435 Fragaria x ananassa HOM05D002465 ORTHO05D005308 4.0e-182 642.1 561 60.2
Thhalv10012991m.g Eutrema salsugineum HOM05D002465 ORTHO05D005308 1.2e-181 640.6 581 57.0
Aqoxy5G04085 Aquilegia oxysepala HOM05D002465 ORTHO05D005308 1.5e-181 640.2 581 56.3
Nn1g01670 Nelumbo nucifera HOM05D002465 ORTHO05D005308 3.7e-180 635.6 503 63.6
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 1.9e-179 633.3 578 56.1
Rhsim03G0191700 Rhododendron simsii HOM05D002465 ORTHO05D005308 1.9e-179 633.3 506 61.9
PGR042G3288 Punica granatum HOM05D002465 ORTHO05D005308 2.4e-179 632.9 577 56.2
TPR.G9187 Trifolium pratense HOM05D002465 ORTHO05D005308 4.1e-179 632.1 595 55.6
BcaB05g21981 Brassica carinata HOM05D002465 ORTHO05D005308 5.4e-179 631.7 577 55.6
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 9.2e-179 630.9 578 55.5
vmacro06621 Vaccinium macrocarpon HOM05D002465 ORTHO05D005308 1.2e-178 630.6 471 66.7
Carub.0008s1296 Capsella rubella HOM05D002465 ORTHO05D005308 1.6e-178 630.2 582 55.7
CiPaw.05G261600 Carya illinoinensis HOM05D002465 ORTHO05D005308 1.6e-178 630.2 492 64.4
Lj2g0016146 Lotus japonicus HOM05D002465 ORTHO05D005308 6.0e-178 628.2 596 55.4
BcaC03g14499 Brassica carinata HOM05D002465 ORTHO05D005308 1.3e-177 627.1 578 55.4
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 1.7e-177 626.7 578 55.5
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 1.7e-177 626.7 561 56.7
PSO170G2577 Papaver somniferum HOM05D002465 ORTHO05D005308 1.1e-176 624.0 578 55.5
AL8G27230 Arabidopsis lyrata HOM05D002465 ORTHO05D005308 1.2e-175 620.5 583 54.9
Glyma.09G129600 Glycine max HOM05D002465 ORTHO05D005308 2.8e-175 619.4 597 53.6
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 2.8e-175 619.4 591 55.0
Sed0022656 Sechium edule HOM05D002465 ORTHO05D005308 8.9e-174 614.4 571 57.3
CsaV3_3G017530 Cucumis sativus L. HOM05D002465 ORTHO05D005308 2.0e-173 613.2 569 56.8
AT5G52800 Arabidopsis thaliana HOM05D002465 ORTHO05D005308 2.6e-173 612.8 566 55.7
Lalb_Chr19g0130571 Lupinus albus HOM05D002465 ORTHO05D005308 3.4e-173 612.5 587 53.7
ClCG05G008450 Citrullus lanatus HOM05D002465 ORTHO05D005308 7.5e-173 611.3 569 56.6
Psat0s1684g0080 Pisum sativum HOM05D002465 ORTHO05D005308 4.1e-171 605.5 582 53.8
Aa31LG3G9040 Aethionema arabicum HOM05D002465 ORTHO05D005308 2.1e-170 603.2 646 49.7
Ah.07g206490 Amaranthus hybridus HOM05D002465 ORTHO05D005308 3.9e-169 599.0 568 53.2
Gohir.A12G253600 Gossypium hirsutum HOM05D002465 ORTHO05D005308 8.9e-166 587.8 591 53.1
Atru.BG.183.p Acer truncatum HOM05D002465 ORTHO05D005308 2.1e-162 576.6 471 62.8
MBI04_g26956_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D005308 7.8e-162 574.7 518 56.6
Hma1.2p1_0274F.1_g110040 Hydrangea macrophylla HOM05D002465 ORTHO05D005308 6.6e-161 571.6 524 58.0
FAN01G1269 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.1e-160 570.9 587 54.3
Peaxi162Scf00023g00823 Petunia axillaris HOM05D002465 ORTHO05D005308 4.7e-159 565.5 430 66.3
Os07g0467900 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D005308 1.8e-158 563.5 585 51.5
Phvul.004G106200 Phaseolus vulgaris HOM05D002465 ORTHO05D005308 8.4e-156 554.7 504 56.5
DCAR_029292 Daucus carota HOM05D002465 ORTHO05D005308 2.1e-151 540.0 454 57.7
DCAR_018565 Daucus carota HOM05D002465 ORTHO05D005308 6.9e-150 535.0 468 56.4
SHI09096 Sapria himalayana HOM05D002465 ORTHO05D005308 2.2e-148 530.0 466 57.9
MSTRG.8702 Avicennia marina HOM05D002465 ORTHO05D005308 9.3e-147 524.6 313 79.9
MELO3C006956.2 Cucumis melo HOM05D002465 ORTHO05D005308 9.3e-147 524.6 566 52.5
arahy.Tifrunner.gnm1.ann1.77GMEU Arachis hypogaea HOM05D002465 ORTHO05D005308 1.0e-145 521.2 573 50.6
HPP92_015081 Vanilla planifolia HOM05D002465 ORTHO05D005308 1.3e-145 520.8 491 56.6
ATR0661G279 Amborella trichopoda HOM05D002465 ORTHO05D005308 1.7e-145 520.4 498 53.0
arahy.Tifrunner.gnm1.ann1.TJ5MNL Arachis hypogaea HOM05D002465 ORTHO05D005308 5.6e-136 488.8 449 54.3
Medtr6g052340 Medicago truncatula HOM05D002465 ORTHO05D005308 8.1e-135 485.0 395 59.2
CSS0029570 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D005308 1.6e-127 460.7 348 63.8
Mapoly0051s0060 Marchantia polymorpha HOM05D002465 ORTHO05D005308 2.4e-126 456.8 512 47.1
Pp3c1_12340 Physcomitrium patens HOM05D002465 ORTHO05D005308 1.9e-123 447.2 503 47.1
AagrBONN_evm.TU.Sc2ySwM_228.3313 Anthoceros agrestis HOM05D002465 ORTHO05D005308 4.8e-119 432.6 581 42.5
Ca_26606_v3 Cicer arietinum L. HOM05D002465 ORTHO05D005308 3.1e-118 429.9 595 44.5
RcHm_v2.0_Chr3g0497461 Rosa chinensis HOM05D002465 ORTHO05D005308 2.2e-111 407.1 359 59.1
Sabra17G0121400 Salix brachista HOM05D002465 ORTHO05D005308 5.9e-101 372.5 460 46.3
CBR_g36403 Chara braunii HOM05D002465 ORTHO05D005308 5.2e-97 359.4 492 41.9
SMO103G0001 Selaginella moellendorffii HOM05D002465 ORTHO05D005308 1.5e-96 357.8 402 46.3
CANSAT21G2443 Cannabis sativa HOM05D002465 ORTHO05D005308 9.7e-88 328.6 321 56.1
VMungo0464G1215 Vigna mungo HOM05D002465 ORTHO05D005308 2.7e-82 310.5 289 54.7
MSTRG.8701 Avicennia marina HOM05D002465 ORTHO05D005308 1.1e-78 298.5 223 71.3
DCAR_005086 Daucus carota HOM05D002465 ORTHO05D005308 7.8e-69 265.8 332 43.1
Oeu058603.1 Olea europaea HOM05D002465 ORTHO05D005308 1.0e-65 255.4 175 70.3
DCAR_030059 Daucus carota HOM05D002465 ORTHO05D005308 4.0e-65 253.4 181 63.0
SEGI_25618 Sequoiadendron giganteum HOM05D002465 ORTHO05D005308 1.2e-64 251.9 208 58.2
MCO12G313 Micromonas commoda HOM05D002465 ORTHO05D005308 8.3e-63 245.7 400 36.0
FAN05G2518 Fragaria x ananassa HOM05D002465 ORTHO05D005308 5.0e-60 236.5 154 72.1
FAN09G4610 Fragaria x ananassa HOM05D002465 ORTHO05D005308 5.0e-60 236.5 154 72.1
FAN10G2552 Fragaria x ananassa HOM05D002465 ORTHO05D005308 5.0e-60 236.5 154 72.1
FAN25G3664 Fragaria x ananassa HOM05D002465 ORTHO05D005308 5.0e-60 236.5 154 72.1
DCAR_029376 Daucus carota HOM05D002465 ORTHO05D005308 3.6e-58 230.3 155 64.5
CSS0047166 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D005308 5.2e-57 226.5 197 58.4
MD01G1209700 Malus domestica HOM05D002465 ORTHO05D005308 3.0e-52 210.7 225 55.6
Zm00001eb320240 Zea mays HOM05D002465 ORTHO05D005308 2.2e-47 194.5 222 50.0
HPP92_028543 Vanilla planifolia HOM05D002465 ORTHO05D005308 1.8e-41 174.9 158 53.8
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 8.4e-39 166.0 240 44.2
PRCOL_00005773 Prasinoderma coloniale HOM05D002465 ORTHO05D005308 1.4e-38 165.2 447 30.4
Actinidia08585 Actinidia chinensis HOM05D002465 ORTHO05D005308 2.3e-36 157.9 98 70.4
SEGI_28877 Sequoiadendron giganteum HOM05D002465 ORTHO05D005308 1.1e-30 139.0 123 49.6
FAN03G1432 Fragaria x ananassa HOM05D002465 ORTHO05D005308 3.2e-30 137.5 152 49.3
FAN09G0727 Fragaria x ananassa HOM05D002465 ORTHO05D005308 3.2e-30 137.5 152 49.3
FAN09G3189 Fragaria x ananassa HOM05D002465 ORTHO05D005308 3.2e-30 137.5 152 49.3
FAN14G0324 Fragaria x ananassa HOM05D002465 ORTHO05D005308 3.2e-30 137.5 152 49.3
FAN16G1547 Fragaria x ananassa HOM05D002465 ORTHO05D005308 3.2e-30 137.5 152 49.3
FAN21G0521 Fragaria x ananassa HOM05D002465 ORTHO05D005308 3.2e-30 137.5 152 49.3
FAN22G1212 Fragaria x ananassa HOM05D002465 ORTHO05D005308 3.2e-30 137.5 152 49.3
FAN25G1827 Fragaria x ananassa HOM05D002465 ORTHO05D005308 3.2e-30 137.5 152 49.3
FAN25G2717 Fragaria x ananassa HOM05D002465 ORTHO05D005308 3.2e-30 137.5 152 49.3
FAN27G0148 Fragaria x ananassa HOM05D002465 ORTHO05D005308 3.2e-30 137.5 152 49.3
FAN27G0541 Fragaria x ananassa HOM05D002465 ORTHO05D005308 3.2e-30 137.5 152 49.3
FAN27G0848 Fragaria x ananassa HOM05D002465 ORTHO05D005308 3.2e-30 137.5 152 49.3
FAN28G0992 Fragaria x ananassa HOM05D002465 ORTHO05D005308 3.2e-30 137.5 152 49.3
DCAR_030105 Daucus carota HOM05D002465 ORTHO05D005308 6.6e-28 129.8 211 37.9
Cre17.g705150 Chlamydomonas reinhardtii HOM05D002465 ORTHO05D005308 1.3e-26 125.6 360 26.1
Psat0s1616g0040 Pisum sativum HOM05D002465 ORTHO05D005308 4.8e-26 123.6 164 45.1
vmacro06620 Vaccinium macrocarpon HOM05D002465 ORTHO05D005308 3.4e-24 117.5 121 44.6
CBR_g81559 Chara braunii HOM05D002465 ORTHO05D005308 1.3e-23 115.5 172 36.0
RcHm_v2.0_Chr1g0361031 Rosa chinensis HOM05D002465 ORTHO05D005308 1.3e-23 115.5 76 67.1
Sabra17G0121500 Salix brachista HOM05D002465 ORTHO05D005308 1.0e-20 105.9 119 50.4
CBR_g19350 Chara braunii HOM05D000019 ORTHO05D000048 5.6e-19 100.1 203 30.0
Nitab4.5_0007593g0030 Nicotiana tabacum HOM05D002465 ORTHO05D005308 9.0e-17 92.8 45 88.9
Rhsim10G0052100 Rhododendron simsii HOM05D002465 ORTHO05D036401 5.8e-16 90.1 92 57.6
Sabra18G0007300 Salix brachista HOM05D002718 ORTHO05D003269 5.8e-16 90.1 72 70.8
FAN23G0684 Fragaria x ananassa HOM05D002465 ORTHO05D000592 7.6e-16 89.7 151 38.4
PSO063G0346 Papaver somniferum HOM05D002465 ORTHO05D005308 3.0e-12 77.8 101 39.6
Cre12.g553253 Chlamydomonas reinhardtii HOM05D002465 ORTHO05D145954 1.3e-10 72.4 71 45.1
Solyc12g044350.1 Solanum lycopersicum HOM05D002465 ORTHO05D005308 2.6e-08 64.7 37 73.0
Peaxi162Scf00023g00818 Petunia axillaris HOM05D002465 ORTHO05D005308 7.6e-08 63.2 48 62.5
CBR_g47978 Chara braunii HOM05D002465 ORTHO05D005308 1.9e-06 58.5 100 31.0


User provided reference genes

Program Settings