Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G2189 Salvia bowleyana HOM05D002160 ORTHO05D002012 4.4e-48 194.5 113 100.0
vmacro20155 Vaccinium macrocarpon HOM05D002160 ORTHO05D002012 6.6e-12 74.3 111 53.2
Oeu036147.1 Olea europaea HOM05D002160 ORTHO05D002012 7.3e-11 70.9 52 88.5
SGA_v2.0_scaffold35G14233 Striga asiatica HOM05D000119 ORTHO05D000054 3.4e-08 62.0 51 82.4
SalBow3G1804 Salvia bowleyana HOM05D002160 ORTHO05D002012 4.4e-08 61.6 50 74.0
Solyc09g010800.5.1 Solanum lycopersicum HOM05D002160 ORTHO05D002012 7.5e-08 60.8 50 76.0
Sopen09g005530 Solanum pennellii HOM05D002160 ORTHO05D002012 7.5e-08 60.8 50 76.0
Migut.L01944 Erythranthe guttata HOM05D002160 ORTHO05D002012 9.9e-08 60.5 48 85.4
arahy.Tifrunner.gnm1.ann1.EU8JQM Arachis hypogaea HOM05D002160 ORTHO05D002012 1.3e-07 60.1 49 77.6
arahy.Tifrunner.gnm1.ann1.FFQQ4A Arachis hypogaea HOM05D002160 ORTHO05D002012 1.3e-07 60.1 49 77.6
Oeu011407.1 Olea europaea HOM05D002160 ORTHO05D002012 1.3e-07 60.1 53 81.1
PGSC0003DMG401008909 Solanum tuberosum HOM05D002160 ORTHO05D002012 1.3e-07 60.1 50 76.0
PGSC0003DMG402008909 Solanum tuberosum HOM05D002160 ORTHO05D002012 1.3e-07 60.1 50 76.0
Dinv37174 Davidia involucrata HOM05D002160 ORTHO05D002012 1.7e-07 59.7 51 78.4
GSVIVG01034174001 Vitis vinifera HOM05D002160 ORTHO05D002012 1.7e-07 59.7 51 74.5
MBI14_g20106_MAGBIO Magnolia biondii HOM05D002160 ORTHO05D002012 2.2e-07 59.3 51 76.5
CAN.G326.9 Capsicum annuum HOM05D002160 ORTHO05D002012 3.7e-07 58.5 50 74.0
Oeu049244.1 Olea europaea HOM05D002160 ORTHO05D002012 3.7e-07 58.5 52 65.4
Rhsim05G0192600 Rhododendron simsii HOM05D002160 ORTHO05D002012 4.9e-07 58.2 51 74.5
Eucgr.A01262 Eucalyptus grandis HOM05D002160 ORTHO05D002012 1.1e-06 57.0 52 75.0
Nitab4.5_0006455g0010 Nicotiana tabacum HOM05D002160 ORTHO05D002012 1.1e-06 57.0 50 78.0
CiPaw.03G262000 Carya illinoinensis HOM05D002160 ORTHO05D002012 1.4e-06 56.6 51 51.0
Actinidia26465 Actinidia chinensis HOM05D002160 ORTHO05D002012 1.9e-06 56.2 51 76.5
arahy.Tifrunner.gnm1.ann1.02J1VT Arachis hypogaea HOM05D002160 ORTHO05D002012 1.9e-06 56.2 48 75.0
arahy.Tifrunner.gnm1.ann1.8X9BUY Arachis hypogaea HOM05D002160 ORTHO05D002012 1.9e-06 56.2 48 75.0
CiPaw.09G192500 Carya illinoinensis HOM05D002160 ORTHO05D002012 1.9e-06 56.2 51 72.5
MBI13_g34921_MAGBIO Magnolia biondii HOM05D002160 ORTHO05D002012 1.9e-06 56.2 103 39.8
Actinidia05312 Actinidia chinensis HOM05D002160 ORTHO05D002012 3.2e-06 55.5 51 72.5
Cfa017382 Carpinus fangiana HOM05D002160 ORTHO05D002012 3.2e-06 55.5 51 74.5
Haze_20789 Corylus avellana HOM05D002160 ORTHO05D002012 3.2e-06 55.5 51 74.5
Cc06_g02650 Coffea canephora HOM05D002160 ORTHO05D002012 4.1e-06 55.1 50 78.0
Phvul.008G101800 Phaseolus vulgaris HOM05D002160 ORTHO05D002012 4.1e-06 55.1 49 79.6
Thecc.05G039800 Theobroma cacao HOM05D002160 ORTHO05D002012 4.1e-06 55.1 51 74.5
TAR369G0024 Trochodendron aralioides HOM05D002160 ORTHO05D002012 4.1e-06 55.1 51 72.5
Oeu051930.1 Olea europaea HOM05D002160 ORTHO05D002012 5.4e-06 54.7 52 55.8
Psat3g140160 Pisum sativum HOM05D002160 ORTHO05D002012 5.4e-06 54.7 50 74.0
COL.COLO4_14799 Corchorus olitorius HOM05D002160 ORTHO05D002012 7.1e-06 54.3 51 70.6
MBI14_g20107_MAGBIO Magnolia biondii HOM05D002160 ORTHO05D002012 7.1e-06 54.3 51 72.5
CiPaw.10G145500 Carya illinoinensis HOM05D002160 ORTHO05D002012 9.2e-06 53.9 51 62.7
ClCG10G021120 Citrullus lanatus HOM05D002160 ORTHO05D002012 9.2e-06 53.9 49 73.5


User provided reference genes

Program Settings