Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G1718 Salvia bowleyana HOM05D008155 ORTHO05D010411 4.1e-72 274.6 141 100.0
SalBow4G2153 Salvia bowleyana HOM05D008155 ORTHO05D010411 4.1e-72 274.6 141 100.0
SalBow8G5556 Salvia bowleyana HOM05D008155 ORTHO05D010411 3.8e-33 145.2 66 100.0
Migut.N00987 Erythranthe guttata HOM05D008155 ORTHO05D010411 1.2e-23 113.6 123 56.9
Oeu034763.2 Olea europaea HOM05D008155 ORTHO05D010411 7.9e-23 110.9 130 50.8
MSTRG.5176 Avicennia marina HOM05D008155 ORTHO05D010411 5.1e-22 108.2 125 54.4
Sopen01g044900 Solanum pennellii HOM05D008155 ORTHO05D010411 3.1e-19 99.0 121 48.8
Solyc01g102460.4 Solanum lycopersicum HOM05D008155 ORTHO05D010411 5.9e-18 94.7 121 47.9
PGSC0003DMG400018233 Solanum tuberosum HOM05D008155 ORTHO05D010411 8.5e-17 90.9 99 59.6
Lsat_1_v5_gn_5_146861 Lactuca sativa HOM05D008155 ORTHO05D010411 6.1e-15 84.7 126 46.0
Manes.09G182600 Manihot esculenta HOM05D008155 ORTHO05D010411 6.1e-15 84.7 102 45.1
QL03p011396 Quercus lobata HOM05D008155 ORTHO05D010411 6.1e-15 84.7 90 46.7
CSS0011875 Camellia sinensis var. sinensis HOM05D008155 ORTHO05D010411 2.3e-14 82.8 130 44.6
vmacro19804 Vaccinium macrocarpon HOM05D003050 ORTHO05D003513 5.2e-14 81.6 131 46.6
RcHm_v2.0_Chr3g0459031 Rosa chinensis HOM05D008155 ORTHO05D010411 6.7e-14 81.3 98 44.9
Manes.08G106200 Manihot esculenta HOM05D008155 ORTHO05D010411 8.8e-14 80.9 102 42.2
unitig_699.g19831 Utricularia gibba HOM05D008155 ORTHO05D010411 1.1e-13 80.5 131 43.5
CSS0018964 Camellia sinensis var. sinensis HOM05D008155 ORTHO05D010411 2.6e-13 79.3 148 41.2
Ciclev10029557m.g Citrus clementina HOM05D008155 ORTHO05D010411 3.3e-13 79.0 51 68.6
unitig_747.g21289 Utricularia gibba HOM05D008155 ORTHO05D010411 3.7e-12 75.5 128 43.0
Hma1.2p1_0157F.1_g069510 Hydrangea macrophylla HOM05D008155 ORTHO05D010411 1.4e-11 73.6 138 40.6
SalBow3G3360 Salvia bowleyana HOM05D001167 ORTHO05D010411 2.4e-11 72.8 44 77.3
CANSAT54G1408 Cannabis sativa HOM05D008155 ORTHO05D010411 3.1e-11 72.4 56 55.4
Atru.chr12.1507 Acer truncatum HOM05D008155 ORTHO05D010411 7.0e-11 71.2 53 56.6
FAN02G1576 Fragaria x ananassa HOM05D008155 ORTHO05D010411 1.2e-10 70.5 97 42.3
MD04G1183800 Malus domestica HOM05D008155 ORTHO05D010411 2.6e-10 69.3 51 60.8
Potri.013G000200 Populus trichocarpa HOM05D008155 ORTHO05D010411 2.6e-10 69.3 53 58.5
Atru.chr12.1502 Acer truncatum HOM05D008155 ORTHO05D010411 3.5e-10 68.9 53 54.7
FAN14G4286 Fragaria x ananassa HOM05D008155 ORTHO05D010411 5.9e-10 68.2 97 40.2
TAR365G0599 Trochodendron aralioides HOM05D008155 ORTHO05D010411 7.7e-10 67.8 99 44.4
Sed0023159 Sechium edule HOM05D008155 ORTHO05D010411 1.3e-09 67.0 140 37.9
Gorai.013G241100 Gossypium raimondii HOM05D008155 ORTHO05D010411 1.7e-09 66.6 46 58.7
Nitab4.5_0006193g0010 Nicotiana tabacum HOM05D008155 ORTHO05D010411 1.7e-09 66.6 40 72.5
Potri.005G001100 Populus trichocarpa HOM05D008155 ORTHO05D010411 1.7e-09 66.6 51 58.8
Cpa.g.sc48.233 Carica papaya HOM05D008155 ORTHO05D010411 2.2e-09 66.2 51 60.8
Phvul.001G221000 Phaseolus vulgaris HOM05D008155 ORTHO05D010411 2.2e-09 66.2 139 38.1
TPR.G35721 Trifolium pratense HOM05D008155 ORTHO05D010411 2.9e-09 65.9 52 51.9
Gohir.A13G206400 Gossypium hirsutum HOM05D008155 ORTHO05D010411 5.0e-09 65.1 46 56.5
Lsat_1_v5_gn_1_75801 Lactuca sativa HOM05D008155 ORTHO05D010411 5.0e-09 65.1 122 37.7
TAR362G0658 Trochodendron aralioides HOM05D008155 ORTHO05D010411 5.0e-09 65.1 129 38.8
VMungo1383G2435 Vigna mungo HOM05D008155 ORTHO05D010411 5.0e-09 65.1 139 36.0
Aqoxy7G02124 Aquilegia oxysepala HOM05D008155 ORTHO05D010411 8.5e-09 64.3 49 57.1
CsaV3_2G007430 Cucumis sativus L. HOM05D008155 ORTHO05D010411 8.5e-09 64.3 131 38.2
DCAR_022333 Daucus carota HOM05D008155 ORTHO05D010411 8.5e-09 64.3 140 36.4
Glyma.19G224100 Glycine max HOM05D008155 ORTHO05D010411 1.1e-08 63.9 132 35.6
Cfa004403 Carpinus fangiana HOM05D008155 ORTHO05D010411 1.9e-08 63.2 143 38.5
Prupe.6G302400 Prunus persica HOM05D008155 ORTHO05D010411 3.2e-08 62.4 106 37.7
EL10Ac6g15313 Beta vulgaris HOM05D008155 ORTHO05D010411 5.5e-08 61.6 50 54.0
MELO3C004141.2 Cucumis melo HOM05D008155 ORTHO05D010411 7.2e-08 61.2 137 35.8
Rhsim11G0107200 Rhododendron simsii HOM05D008155 ORTHO05D010411 7.2e-08 61.2 53 58.5
Medtr7g111230 Medicago truncatula HOM05D008155 ORTHO05D010411 1.6e-07 60.1 52 46.2
Thecc.05G331400 Theobroma cacao HOM05D008155 ORTHO05D010411 2.1e-07 59.7 96 36.5
Haze_15003 Corylus avellana HOM05D008155 ORTHO05D010411 2.7e-07 59.3 130 40.0
arahy.Tifrunner.gnm1.ann1.QRZ24D Arachis hypogaea HOM05D008155 ORTHO05D010411 3.6e-07 58.9 54 51.9
Glyma.03G227200 Glycine max HOM05D008155 ORTHO05D010411 3.6e-07 58.9 130 31.5
MD12G1197100 Malus domestica HOM05D008155 ORTHO05D010411 3.6e-07 58.9 124 40.3
Sc03g0006010 Simmondsia chinensis HOM05D008155 ORTHO05D010411 1.0e-06 57.4 104 38.5
TWI56G0796 Tripterygium wilfordii HOM05D008155 ORTHO05D010411 1.4e-06 57.0 132 38.6
Aa31LG11G10020 Aethionema arabicum HOM05D008255 ORTHO05D011943 2.3e-06 56.2 98 35.7
BcaNung03958 Brassica carinata HOM05D008255 ORTHO05D011943 4.0e-06 55.5 51 51.0


User provided reference genes

Program Settings