Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G2102 Salvia bowleyana HOM05D000974 ORTHO05D007456 3.4e-156 555.1 306 100.0
SalBow4G1511 Salvia bowleyana HOM05D000974 ORTHO05D007456 2.0e-127 459.5 306 87.6
Migut.F00239 Erythranthe guttata HOM05D000974 ORTHO05D007456 4.0e-96 355.5 309 63.4
Ciclev10005489m.g Citrus clementina HOM05D000974 ORTHO05D007456 2.0e-95 353.2 308 60.4
Manes.06G157800 Manihot esculenta HOM05D000974 ORTHO05D007456 4.4e-95 352.1 304 60.9
FAN10G1776 Fragaria x ananassa HOM05D000974 ORTHO05D007456 5.8e-95 351.7 309 61.5
FAN06G4709 Fragaria x ananassa HOM05D000974 ORTHO05D007456 7.6e-95 351.3 309 61.2
FvH4_7g31090 Fragaria vesca HOM05D000974 ORTHO05D007456 3.8e-94 349.0 309 60.8
FAN06G0673 Fragaria x ananassa HOM05D000974 ORTHO05D007456 3.8e-94 349.0 309 60.8
Potri.015G021400 Populus trichocarpa HOM05D000974 ORTHO05D007456 3.8e-94 349.0 306 60.8
FAN03G2436 Fragaria x ananassa HOM05D000974 ORTHO05D006000 4.9e-94 348.6 305 61.6
RcHm_v2.0_Chr1g0380171 Rosa chinensis HOM05D000974 ORTHO05D007456 1.1e-93 347.4 304 62.5
Thecc.03G193600 Theobroma cacao HOM05D000974 ORTHO05D007456 4.2e-93 345.5 304 60.2
FAN10G1818 Fragaria x ananassa HOM05D000974 ORTHO05D006000 5.4e-93 345.1 305 61.3
TWI39G1278 Tripterygium wilfordii HOM05D000974 ORTHO05D007456 2.7e-92 342.8 306 61.1
Potri.015G021100 Populus trichocarpa HOM05D000974 ORTHO05D007456 4.6e-92 342.0 304 60.2
Oeu060978.1 Olea europaea HOM05D000974 ORTHO05D007456 1.0e-91 340.9 303 61.4
MD07G1285800 Malus domestica HOM05D000974 ORTHO05D007456 1.3e-91 340.5 310 59.7
DCAR_020306 Daucus carota HOM05D000974 ORTHO05D007456 3.0e-91 339.3 305 59.7
MD01G1215900 Malus domestica HOM05D000974 ORTHO05D007456 8.7e-91 337.8 310 59.7
AUR62006147 Chenopodium quinoa HOM05D000974 ORTHO05D007456 1.1e-90 337.4 302 60.3
Gohir.A09G183700 Gossypium hirsutum HOM05D000974 ORTHO05D007456 2.5e-90 336.3 304 58.2
Gohir.D09G178500 Gossypium hirsutum HOM05D000974 ORTHO05D007456 3.3e-90 335.9 304 58.2
COL.COLO4_35640 Corchorus olitorius HOM05D000974 ORTHO05D007456 4.3e-90 335.5 304 58.6
PGR142G2075 Punica granatum HOM05D000974 ORTHO05D007456 5.6e-90 335.1 306 57.8
Gorai.006G200500 Gossypium raimondii HOM05D000974 ORTHO05D007456 2.1e-89 333.2 304 57.6
CSS0027071 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D007456 2.8e-89 332.8 304 57.6
Actinidia34202 Actinidia chinensis HOM05D000974 ORTHO05D007456 8.1e-89 331.3 302 58.9
Haze_00118 Corylus avellana HOM05D000974 ORTHO05D007456 1.4e-88 330.5 306 62.4
SGA_v2.0_scaffold192G40573 Striga asiatica HOM05D000974 ORTHO05D007456 1.8e-88 330.1 307 58.6
EL10Ac3g05342 Beta vulgaris HOM05D000974 ORTHO05D007456 4.0e-88 328.9 313 57.8
Potri.012G031000 Populus trichocarpa HOM05D000974 ORTHO05D007456 4.0e-88 328.9 306 57.5
Ca_16682_v3 Cicer arietinum L. HOM05D000974 ORTHO05D007456 6.9e-88 328.2 306 57.5
GSVIVG01028702001 Vitis vinifera HOM05D000974 ORTHO05D007456 9.0e-88 327.8 302 57.0
Prupe.2G308000 Prunus persica HOM05D000974 ORTHO05D002201 2.0e-87 326.6 306 57.8
Cc02_g01830 Coffea canephora HOM05D000974 ORTHO05D007456 3.4e-87 325.9 305 57.0
CsaV3_5G000660 Cucumis sativus L. HOM05D000974 ORTHO05D007456 7.6e-87 324.7 305 58.4
Dinv28331 Davidia involucrata HOM05D000974 ORTHO05D007456 7.6e-87 324.7 253 65.2
Lalb_Chr11g0066601 Lupinus albus HOM05D000974 ORTHO05D007456 7.6e-87 324.7 306 58.2
Glyma.06G125900 Glycine max HOM05D000974 ORTHO05D007456 1.9e-85 320.1 304 55.3
TPR.G17305 Trifolium pratense HOM05D000974 ORTHO05D007456 1.9e-85 320.1 306 56.2
C07p43580 Brassica napus HOM05D000974 ORTHO05D007456 5.4e-85 318.5 317 57.1
BolC7t44885H Brassica oleracea HOM05D000974 ORTHO05D007456 5.4e-85 318.5 317 57.1
Thhalv10005277m.g Eutrema salsugineum HOM05D000974 ORTHO05D007456 5.4e-85 318.5 317 56.2
Nitab4.5_0005625g0010 Nicotiana tabacum HOM05D000974 ORTHO05D007456 5.4e-85 318.5 304 56.9
BcaNung01212 Brassica carinata HOM05D000974 ORTHO05D007456 7.1e-85 318.2 315 56.8
AUR62019342 Chenopodium quinoa HOM05D000974 ORTHO05D007456 9.3e-85 317.8 304 58.6
A06p34970 Brassica napus HOM05D000974 ORTHO05D007456 1.2e-84 317.4 317 56.8
BraA06t26421Z Brassica rapa HOM05D000974 ORTHO05D007456 1.2e-84 317.4 317 56.8
ClCG01G000560 Citrullus lanatus HOM05D000974 ORTHO05D007456 1.2e-84 317.4 305 57.7
Nitab4.5_0002589g0050 Nicotiana tabacum HOM05D000974 ORTHO05D007456 1.6e-84 317.0 304 56.2
arahy.Tifrunner.gnm1.ann1.D5FDUQ Arachis hypogaea HOM05D000974 ORTHO05D007456 2.7e-84 316.2 304 56.2
arahy.Tifrunner.gnm1.ann1.LG8YER Arachis hypogaea HOM05D000974 ORTHO05D007456 2.7e-84 316.2 304 56.2
Glyma.04G238050 Glycine max HOM05D000974 ORTHO05D007456 4.6e-84 315.5 304 54.9
BcaNung01815 Brassica carinata HOM05D000974 ORTHO05D007456 6.0e-84 315.1 317 56.5
vmacro06564 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 6.0e-84 315.1 345 52.2
VMungo1309G2916 Vigna mungo HOM05D000974 ORTHO05D007456 1.0e-83 314.3 302 55.6
AL6G35490 Arabidopsis lyrata HOM05D000974 ORTHO05D007456 1.3e-83 313.9 317 55.8
Carub.0006s2186 Capsella rubella HOM05D000974 ORTHO05D007456 3.0e-83 312.8 315 59.0
CARHR189450 Cardamine hirsuta HOM05D000974 ORTHO05D007456 3.0e-83 312.8 316 55.4
AT5G24130 Arabidopsis thaliana HOM05D000974 ORTHO05D007456 3.9e-83 312.4 315 55.6
CANSAT21G0519 Cannabis sativa HOM05D000974 ORTHO05D007456 3.9e-83 312.4 312 55.1
Peaxi162Scf00904g00123 Petunia axillaris HOM05D000974 ORTHO05D007456 6.6e-83 311.6 304 56.2
TAR636G3288 Trochodendron aralioides HOM05D000974 ORTHO05D007456 8.7e-83 311.2 306 58.5
Medtr3g090955 Medicago truncatula HOM05D000974 ORTHO05D007456 1.1e-82 310.8 305 55.1
vmacro10108 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 2.5e-82 309.7 304 55.9
Sabra12G0020600 Salix brachista HOM05D000974 ORTHO05D007456 4.3e-82 308.9 317 52.7
Phvul.009G137800 Phaseolus vulgaris HOM05D000974 ORTHO05D007456 5.6e-82 308.5 302 54.6
Sed0023834 Sechium edule HOM05D000974 ORTHO05D007456 9.6e-82 307.8 305 55.4
Rhsim09G0204100 Rhododendron simsii HOM05D000974 ORTHO05D007456 1.3e-81 307.4 302 55.6
Aa31LG11G3400 Aethionema arabicum HOM05D000974 ORTHO05D007456 1.6e-81 307.0 312 53.8
THA.LOC104821367 Tarenaya hassleriana HOM05D000974 ORTHO05D007456 1.6e-81 307.0 310 55.2
Sp2g23180 Schrenkiella parvula HOM05D000974 ORTHO05D007456 6.2e-81 305.1 317 54.9
unitig_747.g21851 Utricularia gibba HOM05D000974 ORTHO05D007456 1.1e-80 304.3 266 59.8
PSO135G0499 Papaver somniferum HOM05D000974 ORTHO05D007456 3.1e-80 302.8 307 53.4
Rhsim03G0199900 Rhododendron simsii HOM05D000974 ORTHO05D007456 1.2e-79 300.8 305 56.4
PSO384G1506 Papaver somniferum HOM05D000974 ORTHO05D007456 3.4e-79 299.3 310 53.5
Cpa.g.sc34.147 Carica papaya HOM05D000974 ORTHO05D007456 6.4e-78 295.0 302 56.0
TAR375G0325 Trochodendron aralioides HOM05D000974 ORTHO05D007456 8.4e-78 294.7 308 58.8
Atru.chr1.258 Acer truncatum HOM05D000974 ORTHO05D007456 1.2e-76 290.8 304 57.2
Lsat_1_v5_gn_9_57980 Lactuca sativa HOM05D000974 ORTHO05D007456 3.5e-76 289.3 310 53.5
Lj1g0000480 Lotus japonicus HOM05D000974 ORTHO05D007456 3.5e-76 289.3 302 52.3
Aqoxy7G00132 Aquilegia oxysepala HOM05D000974 ORTHO05D007456 1.3e-75 287.3 307 53.4
ECA232G4254 Erigeron canadensis HOM05D000974 ORTHO05D007456 4.3e-74 282.3 304 55.6
Cfa016368 Carpinus fangiana HOM05D000974 ORTHO05D007456 2.1e-73 280.0 307 57.0
HanXRQChr09g0253031 Helianthus annuus HOM05D000974 ORTHO05D007456 1.8e-72 276.9 294 55.4
MBI07_g34227_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 4.0e-72 275.8 307 58.0
Psat5g079560 Pisum sativum HOM05D000974 ORTHO05D007456 4.0e-72 275.8 302 50.7
DCAR_014533 Daucus carota HOM05D000974 ORTHO05D007456 6.9e-72 275.0 306 56.2
Lsat_1_v5_gn_2_134181 Lactuca sativa HOM05D000974 ORTHO05D007456 8.4e-70 268.1 264 53.8
Lj1A1013G39 Lonicera japonica HOM05D000974 ORTHO05D007456 2.5e-69 266.5 304 51.3
Duzib084G1361 Durio zibethinus HOM05D000974 ORTHO05D007456 1.3e-67 260.8 302 52.6
HanXRQChr14g0462881 Helianthus annuus HOM05D000974 ORTHO05D007456 3.7e-65 252.7 254 54.3
Oeu060979.1 Olea europaea HOM05D000974 ORTHO05D007456 2.4e-64 250.0 203 64.0
Potri.015G021300 Populus trichocarpa HOM05D000974 ORTHO05D007456 4.5e-63 245.7 206 61.7
HPP92_005207 Vanilla planifolia HOM05D000974 ORTHO05D007456 1.3e-62 244.2 310 48.1
Rhsim09G0204200 Rhododendron simsii HOM05D000974 ORTHO05D007456 1.1e-61 241.1 259 50.6
Nn1g01835 Nelumbo nucifera HOM05D000974 ORTHO05D007456 1.9e-61 240.4 307 52.1
Lj3A909T48 Lonicera japonica HOM05D000974 ORTHO05D007456 5.1e-59 232.3 272 49.3
Zm00001eb238160 Zea mays HOM05D000974 ORTHO05D007456 8.2e-57 224.9 317 44.5
QL09p010742 Quercus lobata HOM05D000974 ORTHO05D007456 9.0e-56 221.5 242 57.0
CDE10G0850 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 2.3e-51 206.8 304 48.4
ECA238G2040 Erigeron canadensis HOM05D005084 ORTHO05D006254 1.9e-45 187.2 233 46.4
Os02g0257200 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 2.7e-44 183.3 311 45.0
AagrBONN_evm.TU.Sc2ySwM_117.3541 Anthoceros agrestis HOM05D000974 ORTHO05D007456 9.7e-42 174.9 284 38.0
CiPaw.05G257400 Carya illinoinensis HOM05D000974 ORTHO05D007456 4.8e-41 172.6 134 66.4
Zm00001eb345000 Zea mays HOM05D000974 ORTHO05D007456 7.0e-40 168.7 276 40.2
Mapoly0123s0011 Marchantia polymorpha HOM05D000974 ORTHO05D007456 5.9e-39 165.6 277 39.7
Oeu060977.1 Olea europaea HOM05D000974 ORTHO05D007456 5.5e-37 159.1 119 68.9
Os05g0586700 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 1.6e-36 157.5 304 36.8
MBI07_g45742_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 2.1e-36 157.1 307 39.1
Sopen03g003300 Solanum pennellii HOM05D000974 ORTHO05D007456 1.5e-34 151.0 186 46.2
Lalb_Chr08g0240561 Lupinus albus HOM05D000974 ORTHO05D007456 3.3e-34 149.8 124 61.3
PGSC0003DMG400009074 Solanum tuberosum HOM05D000974 ORTHO05D007456 9.7e-34 148.3 142 53.5
Pp3c2_19140 Physcomitrium patens HOM05D000974 ORTHO05D007456 1.3e-33 147.9 310 35.5
SMO347G0394 Selaginella moellendorffii HOM05D000974 ORTHO05D007456 3.7e-33 146.4 314 33.1
Hma1.2p1_1655F.1_g295980 Hydrangea macrophylla HOM05D000974 ORTHO05D007456 5.0e-30 136.0 189 51.3
Actinidia08630 Actinidia chinensis HOM05D000974 ORTHO05D007456 1.4e-27 127.9 112 59.8
FAN01G0307 Fragaria x ananassa HOM05D000974 ORTHO05D007456 4.0e-27 126.3 309 33.3
CiPaw.05G257300 Carya illinoinensis HOM05D000974 ORTHO05D007456 7.5e-26 122.1 142 50.0
Rhsim02G0197500 Rhododendron simsii HOM05D000974 ORTHO05D007456 2.8e-25 120.2 173 42.8
Rhsim04G0082700 Rhododendron simsii HOM05D000974 ORTHO05D007456 1.4e-24 117.9 173 42.2
ATR0589G055 Amborella trichopoda HOM05D000974 ORTHO05D007456 9.1e-24 115.2 120 55.0
Pp3c3_31670 Physcomitrium patens HOM05D000974 ORTHO05D007456 3.6e-20 103.2 158 43.0
vmacro10109 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 8.8e-19 98.6 149 39.6
Lalb_Chr08g0240541 Lupinus albus HOM05D000974 ORTHO05D007456 1.7e-17 94.4 102 52.9
Lalb_Chr08g0240551 Lupinus albus HOM05D000974 ORTHO05D007456 2.8e-17 93.6 124 42.7
Atru.chr1.262 Acer truncatum HOM05D000974 ORTHO05D007456 3.5e-15 86.7 101 50.5
CDE10G0750 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 8.6e-14 82.0 108 47.2
TAR629G1462 Trochodendron aralioides HOM05D000974 ORTHO05D007456 8.6e-14 82.0 56 67.9
ATR0589G008 Amborella trichopoda HOM05D000974 ORTHO05D007456 7.5e-10 68.9 115 42.6
DCAR_022594 Daucus carota HOM05D000974 ORTHO05D007456 3.5e-07 60.1 73 50.7
COL.COLO4_02792 Corchorus olitorius HOM05D000974 ORTHO05D007456 7.8e-07 58.9 73 47.9


User provided reference genes

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