Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G2048 Salvia bowleyana HOM05D006974 ORTHO05D008869 7.7e-109 397.1 196 100.0
SalBow4G0051 Salvia bowleyana HOM05D006974 ORTHO05D008869 1.3e-63 246.9 206 67.0
MSTRG.27184 Avicennia marina HOM05D006974 ORTHO05D008869 2.5e-43 179.5 182 54.4
Migut.F00452 Erythranthe guttata HOM05D006974 ORTHO05D008869 7.6e-40 167.9 184 51.1
SGA_v2.0_scaffold2G01176 Striga asiatica HOM05D006974 ORTHO05D008869 1.2e-37 160.6 224 45.1
Dinv22966 Davidia involucrata HOM05D006974 ORTHO05D008869 5.1e-36 155.2 164 50.6
Actinidia13564 Actinidia chinensis HOM05D006974 ORTHO05D008869 6.7e-36 154.8 214 42.5
vmacro06778 Vaccinium macrocarpon HOM05D006974 ORTHO05D008869 1.1e-35 154.1 179 45.8
GSVIVG01018563001 Vitis vinifera HOM05D006974 ORTHO05D008869 5.6e-35 151.8 211 42.2
Rhsim03G0169600 Rhododendron simsii HOM05D006974 ORTHO05D008869 4.8e-34 148.7 171 46.2
Hma1.2p1_0654F.1_g196510 Hydrangea macrophylla HOM05D006974 ORTHO05D008869 1.1e-33 147.5 163 50.3
Haze_13839 Corylus avellana HOM05D006974 ORTHO05D008869 3.1e-33 146.0 165 46.1
Thecc.03G158800 Theobroma cacao HOM05D006974 ORTHO05D008869 6.9e-33 144.8 211 41.7
Nitab4.5_0000162g0040 Nicotiana tabacum HOM05D006974 ORTHO05D008869 9.0e-33 144.4 191 41.9
Cfa008219 Carpinus fangiana HOM05D006974 ORTHO05D008869 1.2e-32 144.1 204 39.2
Duzib205G0143 Durio zibethinus HOM05D006974 ORTHO05D008869 3.4e-32 142.5 177 45.2
Nitab4.5_0011187g0010 Nicotiana tabacum HOM05D006974 ORTHO05D008869 4.5e-32 142.1 168 44.6
TAR375G0533 Trochodendron aralioides HOM05D006974 ORTHO05D008869 1.7e-31 140.2 171 44.4
QL09p019059 Quercus lobata HOM05D006974 ORTHO05D008869 2.9e-31 139.4 209 39.7
CAN.G254.11 Capsicum annuum HOM05D006974 ORTHO05D008869 3.8e-31 139.0 187 43.9
MBI04_g35667_MAGBIO Magnolia biondii HOM05D006974 ORTHO05D008869 3.8e-31 139.0 184 44.0
Lj8A39G31 Lonicera japonica HOM05D006974 ORTHO05D008869 4.9e-31 138.7 159 46.5
DCAR_020200 Daucus carota HOM05D006974 ORTHO05D008869 6.4e-31 138.3 204 41.7
COL.COLO4_14152 Corchorus olitorius HOM05D006974 ORTHO05D008869 8.4e-31 137.9 211 40.3
Lsat_1_v5_gn_8_9321 Lactuca sativa HOM05D006974 ORTHO05D008869 8.4e-31 137.9 190 43.7
Nn1g01127 Nelumbo nucifera HOM05D006974 ORTHO05D008869 8.4e-31 137.9 225 38.7
PSO478G3596 Papaver somniferum HOM05D006974 ORTHO05D008869 1.9e-30 136.7 180 40.0
Gohir.D12G265200 Gossypium hirsutum HOM05D006974 ORTHO05D008869 3.2e-30 136.0 216 41.2
Gorai.008G284900 Gossypium raimondii HOM05D006974 ORTHO05D008869 3.2e-30 136.0 216 41.2
FAN01G0571 Fragaria x ananassa HOM05D006974 ORTHO05D001482 4.2e-30 135.6 210 39.5
FAN06G2397 Fragaria x ananassa HOM05D006974 ORTHO05D008869 4.2e-30 135.6 210 37.6
Carub.0007s1572 Capsella rubella HOM05D006974 ORTHO05D008869 9.3e-30 134.4 161 41.0
FAN06G1320 Fragaria x ananassa HOM05D006974 ORTHO05D008869 9.3e-30 134.4 210 37.6
FAN10G1329 Fragaria x ananassa HOM05D006974 ORTHO05D008869 9.3e-30 134.4 216 36.6
RcHm_v2.0_Chr1g0374901 Rosa chinensis HOM05D006974 ORTHO05D008869 9.3e-30 134.4 207 38.6
AT4G25290 Arabidopsis thaliana HOM05D006974 ORTHO05D008869 2.1e-29 133.3 159 42.1
FAN03G1551 Fragaria x ananassa HOM05D006974 ORTHO05D008869 2.7e-29 132.9 210 38.1
FAN03G1949 Fragaria x ananassa HOM05D006974 ORTHO05D008869 2.7e-29 132.9 210 38.1
Gohir.A12G265001 Gossypium hirsutum HOM05D006974 ORTHO05D008869 2.7e-29 132.9 205 41.0
Hund11805 Selenicereus undatus HOM05D006974 ORTHO05D008869 4.6e-29 132.1 203 37.4
BolC7t45901H Brassica oleracea HOM05D006974 ORTHO05D008869 7.9e-29 131.3 171 42.1
BcaC06g32824 Brassica carinata HOM05D006974 ORTHO05D008869 1.0e-28 131.0 163 42.9
ECA233G0710 Erigeron canadensis HOM05D006974 ORTHO05D008869 1.0e-28 131.0 130 50.8
Prupe.2G280600 Prunus persica HOM05D006974 ORTHO05D008869 1.0e-28 131.0 204 37.7
C07p54150 Brassica napus HOM05D006974 ORTHO05D008869 1.3e-28 130.6 157 43.9
MD01G1184400 Malus domestica HOM05D006974 ORTHO05D008869 1.8e-28 130.2 200 38.5
A03p55870 Brassica napus HOM05D006974 ORTHO05D008869 3.0e-28 129.4 163 41.1
Cc02_g04050 Coffea canephora HOM05D006974 ORTHO05D008869 3.0e-28 129.4 173 43.4
Atru.chr1.665 Acer truncatum HOM05D006974 ORTHO05D008869 3.9e-28 129.0 188 39.9
CARHR232700 Cardamine hirsuta HOM05D006974 ORTHO05D008869 5.1e-28 128.6 161 42.2
Thhalv10024578m.g Eutrema salsugineum HOM05D006974 ORTHO05D008869 5.1e-28 128.6 159 40.9
AL7G27850 Arabidopsis lyrata HOM05D006974 ORTHO05D008869 6.7e-28 128.3 161 39.8
TWI39G1009 Tripterygium wilfordii HOM05D006974 ORTHO05D008869 6.7e-28 128.3 205 37.1
CiPaw.04G061700 Carya illinoinensis HOM05D006974 ORTHO05D008869 8.7e-28 127.9 214 36.4
PGR142G3751 Punica granatum HOM05D006974 ORTHO05D008869 8.7e-28 127.9 206 36.9
Sp7g23310 Schrenkiella parvula HOM05D006974 ORTHO05D008869 8.7e-28 127.9 161 42.2
HPP92_005353 Vanilla planifolia HOM05D006974 ORTHO05D008869 1.5e-27 127.1 180 40.6
BraA03t14658Z Brassica rapa HOM05D006974 ORTHO05D008869 5.6e-27 125.2 163 42.3
Ciclev10004462m.g Citrus clementina HOM05D006974 ORTHO05D008869 7.4e-27 124.8 179 39.1
HanXRQChr05g0142471 Helianthus annuus HOM05D006974 ORTHO05D008869 7.4e-27 124.8 188 40.4
Cpa.g.sc3.293 Carica papaya HOM05D006974 ORTHO05D008869 1.3e-26 124.0 170 39.4
Potri.015G129500 Populus trichocarpa HOM05D006974 ORTHO05D008869 2.1e-26 123.2 208 36.1
EL10Ac3g05814 Beta vulgaris HOM05D006974 ORTHO05D008869 4.8e-26 122.1 197 39.6
CDE11G0471 Ceratophyllum demersum HOM05D006974 ORTHO05D008869 6.2e-26 121.7 158 39.2
Psat7g194280 Pisum sativum HOM05D006974 ORTHO05D008869 6.2e-26 121.7 164 41.5
Sed0012101 Sechium edule HOM05D006974 ORTHO05D008869 1.1e-25 120.9 194 38.1
Lj3g0014807 Lotus japonicus HOM05D006974 ORTHO05D008869 2.4e-25 119.8 197 39.6
Ca_12619_v3 Cicer arietinum L. HOM05D006974 ORTHO05D008869 6.9e-25 118.2 148 45.3
Eucgr.K00151 Eucalyptus grandis HOM05D006974 ORTHO05D008869 6.9e-25 118.2 181 39.8
arahy.Tifrunner.gnm1.ann1.XGT93E Arachis hypogaea HOM05D006974 ORTHO05D008869 9.0e-25 117.9 175 39.4
ClCG01G005180 Citrullus lanatus HOM05D006974 ORTHO05D008869 9.0e-25 117.9 199 37.2
arahy.Tifrunner.gnm1.ann1.X6V7BH Arachis hypogaea HOM05D006974 ORTHO05D008869 1.2e-24 117.5 210 36.7
THA.LOC104808287 Tarenaya hassleriana HOM05D006974 ORTHO05D008869 2.0e-24 116.7 184 35.9
Medtr4g036495 Medicago truncatula HOM05D006974 ORTHO05D008869 1.3e-23 114.0 176 37.5
unitig_46.g18767 Utricularia gibba HOM05D006974 ORTHO05D008869 1.7e-23 113.6 202 39.1
Ah.07g208060 Amaranthus hybridus HOM05D006974 ORTHO05D008869 2.5e-22 109.8 152 40.1
Lj1C983G7 Lonicera japonica HOM05D006974 ORTHO05D008869 3.5e-21 105.9 191 34.0
AUR62016182 Chenopodium quinoa HOM05D006974 ORTHO05D008869 6.0e-21 105.1 199 36.7
Os09g0532700 Oryza sativa ssp. japonica HOM05D006974 ORTHO05D008869 2.2e-18 96.7 169 36.1
SEGI_07793 Sequoiadendron giganteum HOM05D006974 ORTHO05D008869 2.8e-18 96.3 185 30.3
Aqoxy7G00678 Aquilegia oxysepala HOM05D006974 ORTHO05D008869 4.8e-18 95.5 88 51.1
Peaxi162Scf00023g01024 Petunia axillaris HOM05D006974 ORTHO05D008869 2.9e-15 86.3 165 32.7
Pp3c3_8370 Physcomitrium patens HOM05D006974 ORTHO05D008869 1.2e-13 80.9 213 26.8
Pp3c6_9800 Physcomitrium patens HOM05D006974 ORTHO05D008869 1.6e-13 80.5 164 27.4
CSS0030811 Camellia sinensis var. sinensis HOM05D006974 ORTHO05D008869 8.8e-12 74.7 106 37.7
CSS0040808 Camellia sinensis var. sinensis HOM05D006974 ORTHO05D008869 8.8e-12 74.7 65 53.8
Hma1.2p1_0654F.1_g196520 Hydrangea macrophylla HOM05D006974 ORTHO05D008869 5.7e-11 72.0 109 38.5
Mapoly0176s0011 Marchantia polymorpha HOM05D006974 ORTHO05D008869 7.4e-11 71.6 181 28.2
AagrBONN_evm.TU.Sc2ySwM_228.586 Anthoceros agrestis HOM05D006974 ORTHO05D008869 6.3e-10 68.6 95 36.8
Sabra15G0142800 Salix brachista HOM05D006974 ORTHO05D008869 1.4e-09 67.4 104 35.6
SMO296G0035 Selaginella moellendorffii HOM05D006974 ORTHO05D008869 9.1e-09 64.7 135 33.3
Lsat_1_v5_gn_5_191301 Lactuca sativa HOM05D000880 ORTHO05D006637 3.8e-07 59.3 129 29.5
Oeu046675.1 Olea europaea HOM05D000880 ORTHO05D006637 3.8e-07 59.3 115 31.3
PGR044G0339 Punica granatum HOM05D000880 ORTHO05D006637 1.1e-06 57.8 152 30.9
MSTRG.21636 Avicennia marina HOM05D000880 ORTHO05D006637 1.4e-06 57.4 124 31.5
Migut.D00149 Erythranthe guttata HOM05D000880 ORTHO05D006637 1.4e-06 57.4 115 33.0
AagrBONN_evm.TU.Sc2ySwM_228.4336 Anthoceros agrestis HOM05D000880 ORTHO05D006637 1.9e-06 57.0 115 31.3
A05p00340 Brassica napus HOM05D000880 ORTHO05D006637 1.9e-06 57.0 174 27.6
TPR.G3687 Trifolium pratense HOM05D006974 ORTHO05D008869 1.9e-06 57.0 98 32.7
Glyma.09G230500 Glycine max HOM05D006974 ORTHO05D008869 3.2e-06 56.2 49 46.9
Lsat_1_v5_gn_9_5701 Lactuca sativa HOM05D000880 ORTHO05D006637 4.2e-06 55.8 129 28.7
Cpa.g.sc9.257 Carica papaya HOM05D000880 ORTHO05D006637 5.5e-06 55.5 167 26.3
Hund18174 Selenicereus undatus HOM05D000880 ORTHO05D006637 5.5e-06 55.5 172 29.7
Aa31LG1G28930 Aethionema arabicum HOM05D000880 ORTHO05D006637 7.2e-06 55.1 184 29.3
CARHR142990 Cardamine hirsuta HOM05D000880 ORTHO05D006637 7.2e-06 55.1 158 29.1
Actinidia01488 Actinidia chinensis HOM05D000880 ORTHO05D006637 9.4e-06 54.7 176 28.4


User provided reference genes

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