Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G2008 Salvia bowleyana HOM05D004206 ORTHO05D003325 5.1e-210 734.2 379 100.0
Oeu026485.2 Olea europaea HOM05D004206 ORTHO05D003325 6.6e-48 195.7 421 35.4
SalBow3G3817 Salvia bowleyana HOM05D004206 ORTHO05D003325 3.6e-46 189.9 291 44.3
MSTRG.26756 Avicennia marina HOM05D004206 ORTHO05D003325 8.6e-40 168.7 132 65.9
SGA_v2.0_scaffold126G33821 Striga asiatica HOM05D004206 ORTHO05D003325 8.6e-40 168.7 304 44.1
MSTRG.5685 Avicennia marina HOM05D004206 ORTHO05D003325 3.3e-39 166.8 139 62.6
Oeu036176.1 Olea europaea HOM05D004206 ORTHO05D003325 8.1e-38 162.2 260 42.3
Cc06_g02970 Coffea canephora HOM05D004206 ORTHO05D003325 2.0e-36 157.5 142 59.9
Dinv35636 Davidia involucrata HOM05D004206 ORTHO05D003325 2.9e-35 153.7 304 38.5
PGSC0003DMG400008929 Solanum tuberosum HOM05D004206 ORTHO05D003325 2.5e-31 140.6 171 51.5
DCAR_009254 Daucus carota HOM05D004206 ORTHO05D003325 1.2e-30 138.3 146 53.4
Nitab4.5_0000349g0070 Nicotiana tabacum HOM05D004206 ORTHO05D003325 8.1e-30 135.6 167 50.3
Sopen09g005150 Solanum pennellii HOM05D004206 ORTHO05D003325 1.1e-29 135.2 158 56.3
Migut.J00362 Erythranthe guttata HOM05D004206 ORTHO05D003325 1.8e-29 134.4 290 39.0
Nitab4.5_0002077g0110 Nicotiana tabacum HOM05D004206 ORTHO05D003325 5.2e-29 132.9 156 51.9
Peaxi162Scf00039g01222 Petunia axillaris HOM05D004206 ORTHO05D003325 8.9e-29 132.1 253 41.9
Solyc09g010410.3 Solanum lycopersicum HOM05D004206 ORTHO05D003325 1.5e-28 131.3 158 55.1
Nitab4.5_0000527g0130 Nicotiana tabacum HOM05D004206 ORTHO05D003325 7.6e-28 129.0 313 35.1
Lj3C971T5 Lonicera japonica HOM05D004206 ORTHO05D003325 8.4e-27 125.6 152 50.0
Peaxi162Scf00407g00067 Petunia axillaris HOM05D004206 ORTHO05D003325 1.4e-26 124.8 225 44.0
GSVIVG01025530001 Vitis vinifera HOM05D004206 ORTHO05D003325 1.9e-26 124.4 145 54.5
SGA_v2.0_scaffold75G24932 Striga asiatica HOM05D004206 ORTHO05D003325 4.2e-26 123.2 428 31.8
Nitab4.5_0009149g0020 Nicotiana tabacum HOM05D004206 ORTHO05D003325 1.2e-25 121.7 156 51.9
PGSC0003DMG401019213 Solanum tuberosum HOM05D004206 ORTHO05D003325 1.2e-25 121.7 143 53.8
CSS0004803 Camellia sinensis var. sinensis HOM05D004206 ORTHO05D003325 2.1e-25 120.9 196 40.3
CAN.G97.20 Capsicum annuum HOM05D004206 ORTHO05D003325 3.5e-25 120.2 156 53.2
Actinidia26442 Actinidia chinensis HOM05D004206 ORTHO05D003325 7.8e-25 119.0 142 49.3
Hma1.2p1_1707F.1_g298550 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 1.3e-24 118.2 138 51.4
Hund00876 Selenicereus undatus HOM05D004206 ORTHO05D003325 3.9e-24 116.7 149 48.3
Solyc10g086360.2 Solanum lycopersicum HOM05D004206 ORTHO05D003325 7.3e-23 112.5 215 42.3
Gohir.A04G080300 Gossypium hirsutum HOM05D004206 ORTHO05D003325 1.2e-22 111.7 154 42.2
Oeu049209.1 Olea europaea HOM05D004206 ORTHO05D003325 1.2e-22 111.7 235 42.1
Rhsim05G0188200 Rhododendron simsii HOM05D004206 ORTHO05D003325 2.1e-22 110.9 146 47.3
Sopen10g035740 Solanum pennellii HOM05D004206 ORTHO05D003325 2.8e-22 110.5 215 41.9
Hma1.2p1_0350F.1_g132380 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 1.1e-21 108.6 142 52.8
Hma1.2p1_1065F.1_g253750 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 1.1e-21 108.6 142 52.8
MSTRG.19101 Avicennia marina HOM05D004206 ORTHO05D003325 1.4e-21 108.2 189 40.2
HanXRQChr07g0196151 Helianthus annuus HOM05D004206 ORTHO05D003325 1.8e-21 107.8 147 50.3
Thecc.05G044400 Theobroma cacao HOM05D004206 ORTHO05D003325 2.4e-21 107.5 141 51.8
Gohir.D09G153700 Gossypium hirsutum HOM05D004206 ORTHO05D003325 3.1e-21 107.1 160 43.1
MD12G1138400 Malus domestica HOM05D004206 ORTHO05D003325 6.9e-21 105.9 139 45.3
vmacro20128 Vaccinium macrocarpon HOM05D004206 ORTHO05D003325 1.5e-20 104.8 145 47.6
AUR62037393 Chenopodium quinoa HOM05D004206 ORTHO05D003325 2.0e-20 104.4 140 43.6
Gohir.A09G158300 Gossypium hirsutum HOM05D004206 ORTHO05D003325 3.4e-20 103.6 146 50.0
Gorai.006G175200 Gossypium raimondii HOM05D004206 ORTHO05D003325 3.4e-20 103.6 146 50.7
TAR633G1790 Trochodendron aralioides HOM05D004206 ORTHO05D003325 7.6e-20 102.4 175 42.9
Duzib093G1984 Durio zibethinus HOM05D004206 ORTHO05D003325 9.9e-20 102.1 146 49.3
Aqoxy4G02996 Aquilegia oxysepala HOM05D004206 ORTHO05D003325 1.3e-19 101.7 278 32.4
HanXRQChr14g0453751 Helianthus annuus HOM05D004206 ORTHO05D003325 1.7e-19 101.3 149 48.3
Lalb_Chr02g0153081 Lupinus albus HOM05D004206 ORTHO05D003325 2.2e-19 100.9 142 45.8
MD04G1121200 Malus domestica HOM05D004206 ORTHO05D003325 2.2e-19 100.9 150 43.3
Gohir.D04G119400 Gossypium hirsutum HOM05D004206 ORTHO05D003325 2.9e-19 100.5 230 33.5
Manes.09G086700 Manihot esculenta HOM05D004206 ORTHO05D003325 2.9e-19 100.5 143 51.7
Gorai.012G101500 Gossypium raimondii HOM05D004206 ORTHO05D003325 4.9e-19 99.8 154 39.6
Manes.08G076700 Manihot esculenta HOM05D004206 ORTHO05D003325 4.9e-19 99.8 149 43.6
EL10Ac9g20956 Beta vulgaris HOM05D004206 ORTHO05D003325 8.4e-19 99.0 141 44.7
Atru.chr8.1956 Acer truncatum HOM05D004206 ORTHO05D003325 1.4e-18 98.2 144 52.1
vmacro08670 Vaccinium macrocarpon HOM05D004206 ORTHO05D003325 1.4e-18 98.2 140 45.0
RcHm_v2.0_Chr3g0467301 Rosa chinensis HOM05D004206 ORTHO05D003325 3.2e-18 97.1 138 44.9
TWI74G0821 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 3.2e-18 97.1 155 43.2
FAN05G4716 Fragaria x ananassa HOM05D004206 ORTHO05D003325 4.2e-18 96.7 138 42.8
AUR62041741 Chenopodium quinoa HOM05D004206 ORTHO05D003325 5.4e-18 96.3 139 42.4
Prupe.6G250300 Prunus persica HOM05D004206 ORTHO05D003325 7.1e-18 95.9 142 43.7
CSS0042901 Camellia sinensis var. sinensis HOM05D004206 ORTHO05D003325 1.6e-17 94.7 148 45.3
FvH4_6g14310 Fragaria vesca HOM05D004206 ORTHO05D003325 1.6e-17 94.7 137 42.3
FAN02G2861 Fragaria x ananassa HOM05D004206 ORTHO05D003325 1.6e-17 94.7 138 42.0
FAN09G1551 Fragaria x ananassa HOM05D004206 ORTHO05D003325 1.6e-17 94.7 138 42.0
TAR636G0761 Trochodendron aralioides HOM05D004206 ORTHO05D003325 1.6e-17 94.7 134 50.7
Actinidia13126 Actinidia chinensis HOM05D004206 ORTHO05D003325 2.1e-17 94.4 142 47.9
Lsat_1_v5_gn_1_55680 Lactuca sativa HOM05D004206 ORTHO05D003325 2.7e-17 94.0 134 44.0
Potri.006G082100 Populus trichocarpa HOM05D004206 ORTHO05D003325 7.8e-17 92.4 233 34.8
TWI77G0356 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 7.8e-17 92.4 143 44.8
Ciclev10012502m.g Citrus clementina HOM05D004206 ORTHO05D003325 1.0e-16 92.0 145 47.6
unitig_578.g15702 Utricularia gibba HOM05D004206 ORTHO05D003325 1.7e-16 91.3 97 51.5
Hma1.2p1_1535F.1_g289470 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 2.3e-16 90.9 133 41.4
Aqoxy2G02033 Aquilegia oxysepala HOM05D004206 ORTHO05D003325 3.0e-16 90.5 134 41.8
Duzib106G1929 Durio zibethinus HOM05D004206 ORTHO05D003325 3.0e-16 90.5 145 44.8
Ca_08787_v3 Cicer arietinum L. HOM05D004206 ORTHO05D003325 5.1e-16 89.7 158 42.4
PGR004G1990 Punica granatum HOM05D004206 ORTHO05D003325 5.1e-16 89.7 154 41.6
CANSAT35G0311 Cannabis sativa HOM05D004206 ORTHO05D003325 6.6e-16 89.4 145 49.0
Lalb_Chr20g0113171 Lupinus albus HOM05D004206 ORTHO05D003325 1.5e-15 88.2 139 47.5
QL05p010542 Quercus lobata HOM05D004206 ORTHO05D003325 1.9e-15 87.8 151 40.4
QL07p047329 Quercus lobata HOM05D004206 ORTHO05D003325 1.9e-15 87.8 151 40.4
Lalb_Chr06g0171041 Lupinus albus HOM05D004206 ORTHO05D003325 2.5e-15 87.4 138 43.5
Lalb_Chr21g0314341 Lupinus albus HOM05D004206 ORTHO05D003325 3.3e-15 87.0 141 40.4
PGR004G0289 Punica granatum HOM05D004206 ORTHO05D003325 3.3e-15 87.0 149 43.0
ECA238G1623 Erigeron canadensis HOM05D000150 ORTHO05D000108 4.3e-15 86.7 234 36.8
arahy.Tifrunner.gnm1.ann1.72TEPU Arachis hypogaea HOM05D004206 ORTHO05D003325 7.3e-15 85.9 148 41.9
Hund07780 Selenicereus undatus HOM05D004206 ORTHO05D003325 7.3e-15 85.9 196 35.7
ECA233G2126 Erigeron canadensis HOM05D004206 ORTHO05D003325 9.6e-15 85.5 152 42.8
Sabra06G0062000 Salix brachista HOM05D004206 ORTHO05D003325 9.6e-15 85.5 138 43.5
Phvul.001G170100 Phaseolus vulgaris HOM05D004206 ORTHO05D003325 1.3e-14 85.1 158 41.1
Lalb_Chr25g0289551 Lupinus albus HOM05D004206 ORTHO05D003325 1.6e-14 84.7 136 46.3
VMungo1383G1995 Vigna mungo HOM05D004206 ORTHO05D003325 2.1e-14 84.3 373 30.6
Medtr7g099950 Medicago truncatula HOM05D004206 ORTHO05D003325 2.8e-14 84.0 389 27.8
TWI53G0070 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 3.6e-14 83.6 149 43.6
Gohir.A11G326100 Gossypium hirsutum HOM05D004206 ORTHO05D003325 4.8e-14 83.2 145 45.5
Phvul.007G158100 Phaseolus vulgaris HOM05D004206 ORTHO05D003325 4.8e-14 83.2 140 37.9
Lsat_1_v5_gn_2_110540 Lactuca sativa HOM05D004206 ORTHO05D003325 6.2e-14 82.8 170 41.2
PSO206G0053 Papaver somniferum HOM05D004206 ORTHO05D003325 6.2e-14 82.8 155 41.9
Sc20g0004600 Simmondsia chinensis HOM05D004206 ORTHO05D003325 8.1e-14 82.4 85 51.8
Sc01g0003990 Simmondsia chinensis HOM05D004206 ORTHO05D003325 1.4e-13 81.6 151 45.0
Glyma.19G173300 Glycine max HOM05D004206 ORTHO05D003325 1.8e-13 81.3 138 43.5
VMungo0720G2610 Vigna mungo HOM05D004206 ORTHO05D003325 2.4e-13 80.9 217 30.4
Cfa017429 Carpinus fangiana HOM05D004206 ORTHO05D003325 5.3e-13 79.7 158 36.7
Haze_20742 Corylus avellana HOM05D004206 ORTHO05D003325 6.9e-13 79.3 389 29.3
Gorai.007G375400 Gossypium raimondii HOM05D004206 ORTHO05D003325 9.0e-13 79.0 145 46.2
Lj2A99T58 Lonicera japonica HOM05D004206 ORTHO05D003325 9.0e-13 79.0 276 34.1
Glyma.03G172400 Glycine max HOM05D004206 ORTHO05D003325 1.2e-12 78.6 152 40.8
Gohir.D11G345000 Gossypium hirsutum HOM05D004206 ORTHO05D003325 1.5e-12 78.2 145 44.1
PSO339G0439 Papaver somniferum HOM05D004206 ORTHO05D003325 2.0e-12 77.8 155 38.7
CiPaw.10G143300 Carya illinoinensis HOM05D004206 ORTHO05D003325 2.6e-12 77.4 162 35.2
Zm00001eb266560 Zea mays HOM05D019293 ORTHO05D003325 5.8e-12 76.3 151 43.7
Duzib128G2059 Durio zibethinus HOM05D004206 ORTHO05D003325 9.9e-12 75.5 158 43.7
CiPaw.09G188800 Carya illinoinensis HOM05D004206 ORTHO05D003325 2.2e-11 74.3 157 36.9
Lj1g0028211 Lotus japonicus HOM05D004206 ORTHO05D003325 4.9e-11 73.2 149 43.0
Glyma.10G044400 Glycine max HOM05D004206 ORTHO05D003325 6.4e-11 72.8 137 35.0
COL.COLO4_14855 Corchorus olitorius HOM05D004206 ORTHO05D003325 8.4e-11 72.4 136 38.2
Actinidia07050 Actinidia chinensis HOM05D004206 ORTHO05D003325 1.4e-10 71.6 89 50.6
MBI05_g10357_MAGBIO Magnolia biondii HOM05D004206 ORTHO05D003325 2.4e-10 70.9 151 35.1
TAR371G1160 Trochodendron aralioides HOM05D004206 ORTHO05D003325 2.4e-10 70.9 61 60.7
Os05g0113500 Oryza sativa ssp. japonica HOM05D004206 ORTHO05D003325 7.1e-10 69.3 145 40.0
ATR0559G289 Amborella trichopoda HOM05D004206 ORTHO05D003325 9.3e-10 68.9 187 38.0
Nn2g12918 Nelumbo nucifera HOM05D004206 ORTHO05D003325 1.2e-09 68.6 129 42.6
ClCG10G020930 Citrullus lanatus HOM05D004206 ORTHO05D003325 1.6e-09 68.2 247 32.8
Lj5g0023302 Lotus japonicus HOM05D004206 ORTHO05D003325 1.6e-09 68.2 135 34.8
CSS0031426 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D000289 2.7e-09 67.4 113 43.4
Lsat_1_v5_gn_1_55700 Lactuca sativa HOM05D004206 ORTHO05D003325 4.6e-09 66.6 95 45.3
Cpa.g.sc11.170 Carica papaya HOM05D004206 ORTHO05D003325 7.9e-09 65.9 162 38.3
Eucgr.K03159 Eucalyptus grandis HOM05D004206 ORTHO05D003325 1.0e-08 65.5 165 38.8
Ca_09615_v3 Cicer arietinum L. HOM05D004206 ORTHO05D003325 1.3e-08 65.1 206 32.0
Nn2g10438 Nelumbo nucifera HOM05D004206 ORTHO05D003325 2.3e-08 64.3 73 65.8
THA.LOC104805432 Tarenaya hassleriana HOM05D008508 ORTHO05D003325 2.3e-08 64.3 215 34.9
vmacro03102 Vaccinium macrocarpon HOM05D004206 ORTHO05D003325 3.0e-08 63.9 154 32.5
Aa31LG10G9300 Aethionema arabicum HOM05D008508 ORTHO05D003325 6.7e-08 62.8 85 44.7
SalBow8G2190 Salvia bowleyana HOM05D004206 ORTHO05D003325 1.5e-07 61.6 59 52.5
Actinidia05297 Actinidia chinensis HOM05D004206 ORTHO05D003325 1.9e-07 61.2 42 69.0
Actinidia11245 Actinidia chinensis HOM05D004206 ORTHO05D003325 1.9e-07 61.2 69 49.3
ECA248G2846 Erigeron canadensis HOM05D004206 ORTHO05D003325 2.5e-07 60.8 143 37.8
Sed0018769 Sechium edule HOM05D004206 ORTHO05D003325 2.5e-07 60.8 175 36.0
CARHR132120 Cardamine hirsuta HOM05D008508 ORTHO05D003325 3.3e-07 60.5 99 43.4
TPR.G21456 Trifolium pratense HOM05D004206 ORTHO05D003325 4.3e-07 60.1 208 30.8
Psat6g067720 Pisum sativum HOM05D004206 ORTHO05D003325 5.6e-07 59.7 84 47.6
MSTRG.7417 Avicennia marina HOM05D004206 ORTHO05D003325 7.4e-07 59.3 103 42.7
Lsat_1_v5_gn_6_32400 Lactuca sativa HOM05D004206 ORTHO05D003325 2.8e-06 57.4 61 54.1
TPR.G25989 Trifolium pratense HOM05D004206 ORTHO05D003325 2.8e-06 57.4 49 57.1
CSS0043919 Camellia sinensis var. sinensis HOM05D004206 ORTHO05D003325 3.7e-06 57.0 41 65.9
CsaV3_3G035080 Cucumis sativus L. HOM05D004206 ORTHO05D003325 3.7e-06 57.0 153 37.9
Hma1.2p1_1004F.1_g246870 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 3.7e-06 57.0 86 51.2
Aa31LG5G22930 Aethionema arabicum HOM05D008508 ORTHO05D003325 4.8e-06 56.6 71 49.3
Psat3g048840 Pisum sativum HOM05D004206 ORTHO05D003325 4.8e-06 56.6 59 52.5


User provided reference genes

Program Settings