Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G2006 Salvia bowleyana HOM05D001316 ORTHO05D001113 1.2e-107 393.3 210 100.0
SalBow2G2777 Salvia bowleyana HOM05D001316 ORTHO05D001113 4.2e-12 75.9 44 90.9
SalBow4G1468 Salvia bowleyana HOM05D001316 ORTHO05D001113 4.2e-12 75.9 44 90.9
SalBow4G3239 Salvia bowleyana HOM05D001316 ORTHO05D001113 4.2e-12 75.9 44 90.9
SalBow4G1992 Salvia bowleyana HOM05D001316 ORTHO05D001113 1.4e-10 70.9 42 88.1
Rhsim09G0126400 Rhododendron simsii HOM05D001316 ORTHO05D001113 1.5e-09 67.4 199 31.7
SalBow4G2688 Salvia bowleyana HOM05D004399 ORTHO05D005303 1.5e-09 67.4 44 84.1
Potri.008G097000 Populus trichocarpa HOM05D001316 ORTHO05D001113 1.3e-08 64.3 38 86.8
Potri.010G157600 Populus trichocarpa HOM05D001316 ORTHO05D001113 1.7e-08 63.9 37 86.5
Migut.L01180 Erythranthe guttata HOM05D001316 ORTHO05D001113 2.2e-08 63.5 38 86.8
SalBow4G1455 Salvia bowleyana HOM05D001316 ORTHO05D001113 2.2e-08 63.5 44 81.8
SalBow4G1960 Salvia bowleyana HOM05D001316 ORTHO05D001113 2.2e-08 63.5 44 81.8
COL.COLO4_27865 Corchorus olitorius HOM05D001316 ORTHO05D001113 2.8e-08 63.2 40 80.0
Thecc.02G328900 Theobroma cacao HOM05D001316 ORTHO05D001113 2.8e-08 63.2 38 84.2
TAR374G1493 Trochodendron aralioides HOM05D000712 ORTHO05D000617 2.8e-08 63.2 60 58.3
CiPaw.05G124300 Carya illinoinensis HOM05D001316 ORTHO05D001113 4.8e-08 62.4 37 86.5
Gohir.A03G104600 Gossypium hirsutum HOM05D001316 ORTHO05D001113 4.8e-08 62.4 38 81.6
Gohir.D02G129800 Gossypium hirsutum HOM05D001316 ORTHO05D001113 4.8e-08 62.4 38 81.6
Gorai.005G145800 Gossypium raimondii HOM05D001316 ORTHO05D001113 4.8e-08 62.4 38 81.6
Sabra10G0119500 Salix brachista HOM05D001316 ORTHO05D001113 4.8e-08 62.4 37 83.8
Gohir.A13G083100 Gossypium hirsutum HOM05D001316 ORTHO05D001113 6.3e-08 62.0 38 81.6
TAR629G1017 Trochodendron aralioides HOM05D001316 ORTHO05D001113 1.1e-07 61.2 37 83.8
Sp1g22340 Schrenkiella parvula HOM05D001316 ORTHO05D001113 1.4e-07 60.8 38 78.9
Duzib248G1465 Durio zibethinus HOM05D001316 ORTHO05D001113 1.8e-07 60.5 38 78.9
Sc14g0007950 Simmondsia chinensis HOM05D001316 ORTHO05D001113 1.8e-07 60.5 37 81.1
Duzib251G0243 Durio zibethinus HOM05D001316 ORTHO05D001113 2.4e-07 60.1 37 78.4
Prupe.1G288700 Prunus persica HOM05D001316 ORTHO05D001113 2.4e-07 60.1 83 47.0
MSTRG.7739 Avicennia marina HOM05D001316 ORTHO05D001113 3.1e-07 59.7 44 72.7
TAR622G0843 Trochodendron aralioides HOM05D001316 ORTHO05D001113 3.1e-07 59.7 60 56.7
MD13G1060700 Malus domestica HOM05D001316 ORTHO05D001113 4.1e-07 59.3 35 85.7
MD13G1061400 Malus domestica HOM05D001316 ORTHO05D001113 4.1e-07 59.3 35 85.7
Oeu048136.1 Olea europaea HOM05D001316 ORTHO05D001113 4.1e-07 59.3 37 81.1
Gohir.D13G083000 Gossypium hirsutum HOM05D001316 ORTHO05D001113 5.3e-07 58.9 38 78.9
Gorai.013G094900 Gossypium raimondii HOM05D001316 ORTHO05D001113 5.3e-07 58.9 38 78.9
Solyc05g012160.3 Solanum lycopersicum HOM05D001316 ORTHO05D001113 5.3e-07 58.9 44 70.5
Sopen05g006950 Solanum pennellii HOM05D001316 ORTHO05D001113 5.3e-07 58.9 44 70.5
PGSC0003DMG400028366 Solanum tuberosum HOM05D001316 ORTHO05D001113 5.3e-07 58.9 44 70.5
FvH4_4g29840 Fragaria vesca HOM05D001316 ORTHO05D001113 7.0e-07 58.5 37 81.1
FAN12G3040 Fragaria x ananassa HOM05D001316 ORTHO05D001113 7.0e-07 58.5 37 81.1
Rhsim12G0074400 Rhododendron simsii HOM05D001316 ORTHO05D001113 7.0e-07 58.5 37 81.1
GSVIVG01038688001 Vitis vinifera HOM05D001316 ORTHO05D001113 7.0e-07 58.5 38 78.9
EL10Ac6g15012 Beta vulgaris HOM05D001316 ORTHO05D001113 9.1e-07 58.2 36 83.3
unitig_749.g13210 Utricularia gibba HOM05D001316 ORTHO05D001113 9.1e-07 58.2 83 47.0
Cc00_g03400 Coffea canephora HOM05D001316 ORTHO05D001113 1.2e-06 57.8 40 72.5
Manes.06G082900 Manihot esculenta HOM05D001316 ORTHO05D001113 1.2e-06 57.8 35 82.9
vmacro10432 Vaccinium macrocarpon HOM05D001316 ORTHO05D001113 1.2e-06 57.8 37 81.1
vmacro20930 Vaccinium macrocarpon HOM05D001316 ORTHO05D001113 1.2e-06 57.8 37 81.1
GSVIVG01008116001 Vitis vinifera HOM05D001316 ORTHO05D001113 1.2e-06 57.8 40 72.5
COL.COLO4_24320 Corchorus olitorius HOM05D001316 ORTHO05D001113 1.5e-06 57.4 37 81.1
Peaxi162Scf00175g00418 Petunia axillaris HOM05D001316 ORTHO05D001113 1.5e-06 57.4 73 52.1
GSVIVG01012230001 Vitis vinifera HOM05D001316 ORTHO05D001113 1.5e-06 57.4 37 81.1
AT1G69230 Arabidopsis thaliana HOM05D001316 ORTHO05D001113 2.0e-06 57.0 53 58.5
Eucgr.B03146 Eucalyptus grandis HOM05D001316 ORTHO05D001113 2.0e-06 57.0 37 78.4
MD16G1059900 Malus domestica HOM05D001316 ORTHO05D001113 2.0e-06 57.0 35 82.9
QL03p073924 Quercus lobata HOM05D001316 ORTHO05D001113 2.0e-06 57.0 78 47.4
PGSC0003DMG400024631 Solanum tuberosum HOM05D001316 ORTHO05D001113 2.0e-06 57.0 57 54.4
AT1G26355 Arabidopsis thaliana HOM05D001316 ORTHO05D001113 2.6e-06 56.6 38 76.3
CANSAT64G0502 Cannabis sativa HOM05D001316 ORTHO05D001113 2.6e-06 56.6 41 78.0
Cpa.g.sc1.138 Carica papaya HOM05D001316 ORTHO05D001113 2.6e-06 56.6 37 81.1
MBI19_g21276_MAGBIO Magnolia biondii HOM05D001316 ORTHO05D001113 2.6e-06 56.6 57 57.9
Manes.14G086900 Manihot esculenta HOM05D001316 ORTHO05D001113 2.6e-06 56.6 35 80.0
unitig_26.g10285 Utricularia gibba HOM05D001316 ORTHO05D001113 2.6e-06 56.6 47 68.1
Aqoxy3G03666 Aquilegia oxysepala HOM05D001316 ORTHO05D001113 3.5e-06 56.2 46 69.6
CAN.G1228.12 Capsicum annuum HOM05D001316 ORTHO05D001113 3.5e-06 56.2 37 75.7
Dinv17432 Davidia involucrata HOM05D001316 ORTHO05D001113 3.5e-06 56.2 40 70.0
Nitab4.5_0000231g0110 Nicotiana tabacum HOM05D001316 ORTHO05D001113 3.5e-06 56.2 44 70.5
A02p15730 Brassica napus HOM05D001316 ORTHO05D001113 4.5e-06 55.8 33 84.8
C02p26180 Brassica napus HOM05D001316 ORTHO05D001113 4.5e-06 55.8 33 84.8
BolC2t08684H Brassica oleracea HOM05D001316 ORTHO05D001113 4.5e-06 55.8 33 84.8
BraA02t06634Z Brassica rapa HOM05D001316 ORTHO05D001113 4.5e-06 55.8 33 84.8
CSS0015605 Camellia sinensis var. sinensis HOM05D001316 ORTHO05D001113 4.5e-06 55.8 40 72.5
Cpa.g.sc285.4 Carica papaya HOM05D001316 ORTHO05D001113 4.5e-06 55.8 37 78.4
Nitab4.5_0001118g0010 Nicotiana tabacum HOM05D001316 ORTHO05D001113 4.5e-06 55.8 89 43.8
Nitab4.5_0008776g0020 Nicotiana tabacum HOM05D001316 ORTHO05D001113 4.5e-06 55.8 38 78.9
PSO017G7332 Papaver somniferum HOM05D001316 ORTHO05D001113 4.5e-06 55.8 35 80.0
RcHm_v2.0_Chr4g0438091 Rosa chinensis HOM05D001316 ORTHO05D001113 4.5e-06 55.8 37 78.4
AL2G28320 Arabidopsis lyrata HOM05D001316 ORTHO05D001113 5.9e-06 55.5 40 77.5
Haze_11895 Corylus avellana HOM05D001316 ORTHO05D001113 5.9e-06 55.5 38 78.9
Thhalv10019332m.g Eutrema salsugineum HOM05D001316 ORTHO05D001113 5.9e-06 55.5 33 84.8
Manes.01G026900 Manihot esculenta HOM05D001316 ORTHO05D001113 5.9e-06 55.5 37 75.7
Nn4g23461 Nelumbo nucifera HOM05D001316 ORTHO05D001113 5.9e-06 55.5 59 54.2
Sp5g24280 Schrenkiella parvula HOM05D001316 ORTHO05D001113 5.9e-06 55.5 33 84.8
Nn3g17479 Nelumbo nucifera HOM05D001316 ORTHO05D001113 7.7e-06 55.1 37 75.7
Nitab4.5_0007061g0060 Nicotiana tabacum HOM05D001316 ORTHO05D001113 7.7e-06 55.1 44 68.2
Peaxi162Scf00026g01610 Petunia axillaris HOM05D001316 ORTHO05D001113 7.7e-06 55.1 38 76.3


User provided reference genes

Program Settings