Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G1964 Salvia bowleyana HOM05D007303 ORTHO05D009231 2.3e-34 148.3 71 100.0
SalBow4G2888 Salvia bowleyana HOM05D007303 ORTHO05D009231 2.3e-34 148.3 71 100.0
Oeu026929.1 Olea europaea HOM05D007303 ORTHO05D009231 2.4e-28 128.3 71 85.9
Migut.L02050 Erythranthe guttata HOM05D007303 ORTHO05D009231 7.0e-28 126.7 71 85.9
RcHm_v2.0_Chr3g0459881 Rosa chinensis HOM05D007303 ORTHO05D009231 3.9e-26 120.9 71 80.3
Nitab4.5_0001215g0100 Nicotiana tabacum HOM05D007303 ORTHO05D009231 6.6e-26 120.2 70 81.4
FAN05G5278 Fragaria x ananassa HOM05D007303 ORTHO05D009231 8.6e-26 119.8 71 80.3
FAN09G2915 Fragaria x ananassa HOM05D007303 ORTHO05D009231 8.6e-26 119.8 71 80.3
Hund19736 Selenicereus undatus HOM05D007303 ORTHO05D009231 1.5e-25 119.0 71 78.9
FvH4_6g09420 Fragaria vesca HOM05D007303 ORTHO05D009231 1.9e-25 118.6 71 78.9
Oeu007820.2 Olea europaea HOM05D007303 ORTHO05D009231 2.5e-25 118.2 71 78.9
Oeu035181.1 Olea europaea HOM05D007303 ORTHO05D009231 4.3e-25 117.5 67 82.1
Hma1.2p1_0174F.1_g076630 Hydrangea macrophylla HOM05D007303 ORTHO05D009231 7.3e-25 116.7 67 82.1
Prupe.6G297800 Prunus persica HOM05D007303 ORTHO05D009231 7.3e-25 116.7 69 78.3
FAN14G3833 Fragaria x ananassa HOM05D007303 ORTHO05D009231 9.5e-25 116.3 71 77.5
Sopen10g027350 Solanum pennellii HOM05D007303 ORTHO05D009231 9.5e-25 116.3 70 78.6
PGSC0003DMG400027701 Solanum tuberosum HOM05D007303 ORTHO05D009231 9.5e-25 116.3 70 78.6
CAN.G65.102 Capsicum annuum HOM05D007303 ORTHO05D009231 1.2e-24 115.9 70 75.7
CANSAT83G0001 Cannabis sativa HOM05D007303 ORTHO05D009231 2.1e-24 115.2 68 80.9
Cfa017000 Carpinus fangiana HOM05D007303 ORTHO05D009231 2.8e-24 114.8 65 84.6
Cc06_g00200 Coffea canephora HOM05D007303 ORTHO05D009231 3.6e-24 114.4 66 83.3
Manes.09G121600 Manihot esculenta HOM05D007303 ORTHO05D009231 6.2e-24 113.6 66 80.3
Cpa.g.sc0.70 Carica papaya HOM05D007303 ORTHO05D009231 8.0e-24 113.2 66 80.3
Medtr8g005360 Medicago truncatula HOM05D007303 ORTHO05D009231 8.0e-24 113.2 65 81.5
Ah.15g089810 Amaranthus hybridus HOM05D007303 ORTHO05D009231 1.1e-23 112.8 71 76.1
AUR62006451 Chenopodium quinoa HOM05D007303 ORTHO05D009231 1.1e-23 112.8 64 82.8
MD04G1177900 Malus domestica HOM05D007303 ORTHO05D009231 1.1e-23 112.8 61 85.2
MD12G1193500 Malus domestica HOM05D007303 ORTHO05D009231 1.1e-23 112.8 61 85.2
TWI74G1491 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 1.1e-23 112.8 71 80.3
TAR633G2342 Trochodendron aralioides HOM05D007303 ORTHO05D009231 1.1e-23 112.8 64 81.2
Ca_23107_v3 Cicer arietinum L. HOM05D007303 ORTHO05D009231 1.4e-23 112.5 71 78.9
Haze_21228 Corylus avellana HOM05D007303 ORTHO05D009231 1.4e-23 112.5 65 84.6
Lj3g0023771 Lotus japonicus HOM05D007303 ORTHO05D009231 1.8e-23 112.1 71 77.5
COL.COLO4_05680 Corchorus olitorius HOM05D007303 ORTHO05D009231 2.3e-23 111.7 69 75.4
MELO3C025258.2 Cucumis melo HOM05D007303 ORTHO05D009231 4.0e-23 110.9 64 82.8
CsaV3_4G027390 Cucumis sativus L. HOM05D007303 ORTHO05D009231 4.0e-23 110.9 64 82.8
GSVIVG01010904001 Vitis vinifera HOM05D007303 ORTHO05D009231 4.0e-23 110.9 65 78.5
ClCG04G006170 Citrullus lanatus HOM05D007303 ORTHO05D009231 5.2e-23 110.5 65 80.0
Glyma.18G217700 Glycine max HOM05D007303 ORTHO05D009231 5.2e-23 110.5 64 81.2
BcaC01g04187 Brassica carinata HOM05D007303 ORTHO05D009231 6.8e-23 110.2 68 73.5
BolC3t16676H Brassica oleracea HOM05D007303 ORTHO05D009231 6.8e-23 110.2 68 73.5
Glyma.09G271600 Glycine max HOM05D007303 ORTHO05D009231 6.8e-23 110.2 64 79.7
CiPaw.10G166700 Carya illinoinensis HOM05D007303 ORTHO05D009231 8.9e-23 109.8 65 80.0
Eucgr.K01299 Eucalyptus grandis HOM05D007303 ORTHO05D009231 8.9e-23 109.8 65 81.5
AT3G08610 Arabidopsis thaliana HOM05D007303 ORTHO05D009231 1.2e-22 109.4 66 75.8
Duzib151G0876 Durio zibethinus HOM05D007303 ORTHO05D009231 1.2e-22 109.4 65 78.5
AL3G19590 Arabidopsis lyrata HOM05D007303 ORTHO05D009231 1.5e-22 109.0 66 75.8
Gohir.A10G152200 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.5e-22 109.0 65 80.0
Gohir.A10G152700 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.5e-22 109.0 65 80.0
Gohir.D10G113500 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.5e-22 109.0 65 80.0
Gohir.D10G114000 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.5e-22 109.0 65 80.0
Gorai.011G125300 Gossypium raimondii HOM05D007303 ORTHO05D009231 1.5e-22 109.0 65 80.0
Gorai.011G125800 Gossypium raimondii HOM05D007303 ORTHO05D009231 1.5e-22 109.0 65 80.0
BcaB04g21249 Brassica carinata HOM05D007303 ORTHO05D009231 2.0e-22 108.6 69 72.5
PGR031G1377 Punica granatum HOM05D007303 ORTHO05D009231 2.0e-22 108.6 65 76.9
BcaC09g47979 Brassica carinata HOM05D007303 ORTHO05D009231 2.6e-22 108.2 66 75.8
C05p59250 Brassica napus HOM05D007303 ORTHO05D009231 2.6e-22 108.2 66 75.8
BolC1t05499H Brassica oleracea HOM05D007303 ORTHO05D009231 2.6e-22 108.2 66 75.8
BolC5t34572H Brassica oleracea HOM05D007303 ORTHO05D009231 2.6e-22 108.2 66 75.8
BraA01t04340Z Brassica rapa HOM05D007303 ORTHO05D009231 2.6e-22 108.2 66 75.8
CARHR082910 Cardamine hirsuta HOM05D007303 ORTHO05D009231 2.6e-22 108.2 66 75.8
Psat6g005160 Pisum sativum HOM05D007303 ORTHO05D009231 2.6e-22 108.2 65 76.9
Phvul.008G079100 Phaseolus vulgaris HOM05D007303 ORTHO05D009231 3.4e-22 107.8 65 78.5
Sed0004919 Sechium edule HOM05D007303 ORTHO05D009231 3.4e-22 107.8 65 75.4
TWI53G0471 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 4.4e-22 107.5 64 79.7
BcaB04g18583 Brassica carinata HOM05D007303 ORTHO05D009231 5.8e-22 107.1 66 74.2
BcaC05g29598 Brassica carinata HOM05D007303 ORTHO05D009231 5.8e-22 107.1 66 74.2
A05p40170 Brassica napus HOM05D007303 ORTHO05D009231 5.8e-22 107.1 66 74.2
BraA03t12812Z Brassica rapa HOM05D007303 ORTHO05D009231 5.8e-22 107.1 66 74.2
Thhalv10021979m.g Eutrema salsugineum HOM05D007303 ORTHO05D009231 5.8e-22 107.1 66 74.2
Thecc.04G147800 Theobroma cacao HOM05D007303 ORTHO05D009231 7.5e-22 106.7 65 76.9
Carub.0003s0774 Capsella rubella HOM05D007303 ORTHO05D009231 2.2e-21 105.1 66 71.2
THA.LOC104816152 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 2.9e-21 104.8 64 76.6
Lsat_1_v5_gn_8_109701 Lactuca sativa HOM05D007303 ORTHO05D009231 3.7e-21 104.4 67 76.1
arahy.Tifrunner.gnm1.ann1.RL3GXR Arachis hypogaea HOM05D007303 ORTHO05D009231 8.3e-21 103.2 65 75.4
arahy.Tifrunner.gnm1.ann1.ZQ7RI8 Arachis hypogaea HOM05D007303 ORTHO05D009231 8.3e-21 103.2 65 75.4
Aa31LG5G11350 Aethionema arabicum HOM05D007303 ORTHO05D009231 1.4e-20 102.4 66 71.2
Oeu028466.1 Olea europaea HOM05D007303 ORTHO05D009231 2.4e-20 101.7 71 73.2
Sc20g0007240 Simmondsia chinensis HOM05D007303 ORTHO05D009231 2.4e-20 101.7 61 75.4
PSO384G4262 Papaver somniferum HOM05D007303 ORTHO05D009231 4.1e-20 100.9 61 75.4
THA.LOC104820511 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 4.1e-20 100.9 60 80.0
Duzib212G0558 Durio zibethinus HOM05D007303 ORTHO05D009231 5.4e-20 100.5 64 76.6
Aa31LG5G18650 Aethionema arabicum HOM05D007303 ORTHO05D009231 7.0e-20 100.1 65 72.3
Os05g0481600 Oryza sativa ssp. japonica HOM05D007303 ORTHO05D009231 7.0e-20 100.1 63 74.6
DCAR_023961 Daucus carota HOM05D007303 ORTHO05D009231 9.2e-20 99.8 59 79.7
Sp3g07060 Schrenkiella parvula HOM05D007303 ORTHO05D009231 1.2e-19 99.4 58 81.0
ECA236G3381 Erigeron canadensis HOM05D007303 ORTHO05D009231 3.5e-19 97.8 62 75.8
Potri.016G140900 Populus trichocarpa HOM05D007303 ORTHO05D009231 7.8e-19 96.7 65 70.8
SEGI_21984 Sequoiadendron giganteum HOM05D007303 ORTHO05D009231 8.1e-16 86.7 65 61.5
Cc09_g07100 Coffea canephora HOM05D007303 ORTHO05D009231 1.1e-15 86.3 70 64.3
QL07p031324 Quercus lobata HOM05D007303 ORTHO05D009231 1.8e-15 85.5 65 60.0
Cc00_g04100 Coffea canephora HOM05D007303 ORTHO05D009231 4.0e-15 84.3 71 66.2
CiPaw.01G273900 Carya illinoinensis HOM05D007303 ORTHO05D009231 2.6e-14 81.6 61 67.2
Manes.08G168000 Manihot esculenta HOM05D007303 ORTHO05D009231 1.9e-12 75.5 47 78.7
MBI15_g31036_MAGBIO Magnolia biondii HOM05D007303 ORTHO05D009231 7.1e-12 73.6 37 86.5
CSS0019093 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 9.2e-12 73.2 39 82.1
CSS0017493 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 1.2e-11 72.8 39 82.1
CSS0048723 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 1.2e-11 72.8 39 82.1
Sabra04G0157400 Salix brachista HOM05D007303 ORTHO05D009231 7.8e-11 70.1 50 68.0
Zm00001eb290920 Zea mays HOM05D007303 ORTHO05D009231 1.3e-10 69.3 36 86.1
A03p36440 Brassica napus HOM05D007303 ORTHO05D009231 1.7e-10 68.9 37 83.8
Cc07_g13470 Coffea canephora HOM05D007303 ORTHO05D009231 5.6e-09 63.9 49 61.2
Mapoly0148s0030 Marchantia polymorpha HOM05D007303 ORTHO05D009231 1.2e-08 62.8 60 50.0
Pp3c10_5690 Physcomitrium patens HOM05D007303 ORTHO05D009231 1.1e-07 59.7 55 49.1
Pp3c10_5720 Physcomitrium patens HOM05D007303 ORTHO05D009231 1.1e-07 59.7 55 49.1
CBR_g5630 Chara braunii HOM05D007303 ORTHO05D009231 5.2e-07 57.4 56 50.0


User provided reference genes

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