Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G0401 Salvia bowleyana HOM05D006309 ORTHO05D007937 3.2e-65 251.5 120 100.0
SalBow4G1963 Salvia bowleyana HOM05D006309 ORTHO05D007937 3.2e-65 251.5 120 100.0
SalBow4G2407 Salvia bowleyana HOM05D006309 ORTHO05D007937 3.2e-65 251.5 120 100.0
SalBow5G3054 Salvia bowleyana HOM05D006309 ORTHO05D007937 6.3e-45 184.1 120 80.0
arahy.Tifrunner.gnm1.ann1.01IKZ7 Arachis hypogaea HOM05D006309 ORTHO05D007937 1.0e-39 166.8 130 66.9
Prupe.6G304700 Prunus persica HOM05D006309 ORTHO05D007937 2.6e-38 162.2 117 71.8
arahy.Tifrunner.gnm1.ann1.P9U7KY Arachis hypogaea HOM05D006309 ORTHO05D007937 4.4e-38 161.4 120 69.2
arahy.Tifrunner.gnm1.ann1.RC3JIS Arachis hypogaea HOM05D006309 ORTHO05D007937 4.4e-38 161.4 120 69.2
arahy.Tifrunner.gnm1.ann1.VGN228 Arachis hypogaea HOM05D006309 ORTHO05D007937 4.4e-38 161.4 120 69.2
Oeu061901.1 Olea europaea HOM05D006309 ORTHO05D007937 4.4e-38 161.4 120 70.8
Peaxi162Scf00171g00731 Petunia axillaris HOM05D006309 ORTHO05D007937 4.4e-38 161.4 118 70.3
vmacro01669 Vaccinium macrocarpon HOM05D006309 ORTHO05D007937 4.4e-38 161.4 119 68.1
DCAR_007528 Daucus carota HOM05D006309 ORTHO05D007937 9.7e-38 160.2 122 67.2
Nitab4.5_0000936g0050 Nicotiana tabacum HOM05D006309 ORTHO05D007937 9.7e-38 160.2 118 69.5
Sabra13G0001700 Salix brachista HOM05D006309 ORTHO05D007937 1.3e-37 159.8 123 69.1
Actinidia22855 Actinidia chinensis HOM05D006309 ORTHO05D007937 2.2e-37 159.1 119 67.2
Nitab4.5_0004454g0020 Nicotiana tabacum HOM05D006309 ORTHO05D007937 2.8e-37 158.7 118 68.6
CAN.G637.25 Capsicum annuum HOM05D006309 ORTHO05D007937 3.7e-37 158.3 118 68.6
Dinv24513 Davidia involucrata HOM05D006309 ORTHO05D007937 3.7e-37 158.3 120 68.3
vmacro16416 Vaccinium macrocarpon HOM05D006309 ORTHO05D007937 3.7e-37 158.3 120 68.3
Ca_10200_v3 Cicer arietinum L. HOM05D006309 ORTHO05D007937 4.8e-37 157.9 120 65.8
Lj5g0003279 Lotus japonicus HOM05D006309 ORTHO05D007937 4.8e-37 157.9 120 67.5
Psat6g155680 Pisum sativum HOM05D006309 ORTHO05D007937 4.8e-37 157.9 119 66.4
Solyc03g098120.3 Solanum lycopersicum HOM05D006309 ORTHO05D007937 4.8e-37 157.9 118 68.6
Sopen03g028820 Solanum pennellii HOM05D006309 ORTHO05D007937 4.8e-37 157.9 118 68.6
ClCG02G014650 Citrullus lanatus HOM05D006309 ORTHO05D007937 6.3e-37 157.5 119 66.4
Nn7g36656 Nelumbo nucifera HOM05D006309 ORTHO05D007937 6.3e-37 157.5 120 67.5
Rhsim11G0105200 Rhododendron simsii HOM05D006309 ORTHO05D007937 6.3e-37 157.5 120 68.3
Sed0021183 Sechium edule HOM05D006309 ORTHO05D007937 6.3e-37 157.5 119 66.4
Lalb_Chr02g0147551 Lupinus albus HOM05D006309 ORTHO05D007937 8.2e-37 157.1 120 65.8
Atru.chr12.1543 Acer truncatum HOM05D006309 ORTHO05D007937 1.1e-36 156.8 119 68.9
Cc02_g35850 Coffea canephora HOM05D006309 ORTHO05D007937 1.1e-36 156.8 120 66.7
MELO3C004152.2 Cucumis melo HOM05D006309 ORTHO05D007937 1.1e-36 156.8 117 67.5
VMungo0720G0633 Vigna mungo HOM05D006309 ORTHO05D007937 1.1e-36 156.8 119 67.2
Ah.06g190700 Amaranthus hybridus HOM05D006309 ORTHO05D007937 1.4e-36 156.4 120 66.7
Manes.09G181100 Manihot esculenta HOM05D006309 ORTHO05D007937 1.4e-36 156.4 117 68.4
PGR083G2709 Punica granatum HOM05D006309 ORTHO05D007937 1.4e-36 156.4 116 67.2
Rhsim11G0104500 Rhododendron simsii HOM05D006309 ORTHO05D007937 1.4e-36 156.4 120 66.7
PGSC0003DMG400031051 Solanum tuberosum HOM05D006309 ORTHO05D007937 1.4e-36 156.4 118 67.8
Duzib205G1677 Durio zibethinus HOM05D006309 ORTHO05D007937 1.8e-36 156.0 120 67.5
Migut.H01672 Erythranthe guttata HOM05D006309 ORTHO05D007937 1.8e-36 156.0 120 68.3
Phvul.007G205000 Phaseolus vulgaris HOM05D006309 ORTHO05D007937 2.4e-36 155.6 120 66.7
Cpa.g.sc48.50 Carica papaya HOM05D006309 ORTHO05D007937 3.1e-36 155.2 120 66.7
QL03p010963 Quercus lobata HOM05D006309 ORTHO05D007937 3.1e-36 155.2 117 68.4
CSS0019637 Camellia sinensis var. sinensis HOM05D006309 ORTHO05D007937 4.1e-36 154.8 120 67.5
CSS0033999 Camellia sinensis var. sinensis HOM05D006309 ORTHO05D007937 4.1e-36 154.8 120 67.5
Lalb_Chr21g0310061 Lupinus albus HOM05D006309 ORTHO05D007937 5.3e-36 154.5 120 64.2
Hund05518 Selenicereus undatus HOM05D006309 ORTHO05D007937 5.3e-36 154.5 120 66.7
CsaV3_2G007320 Cucumis sativus L. HOM05D006309 ORTHO05D007937 7.0e-36 154.1 119 65.5
TAR636G2194 Trochodendron aralioides HOM05D006309 ORTHO05D007937 1.2e-35 153.3 117 67.5
AUR62000475 Chenopodium quinoa HOM05D006309 ORTHO05D007937 1.5e-35 152.9 120 64.2
AUR62017099 Chenopodium quinoa HOM05D006309 ORTHO05D007937 1.5e-35 152.9 118 66.1
BcaB07g31141 Brassica carinata HOM05D006309 ORTHO05D007937 2.0e-35 152.5 119 65.5
BcaC04g22081 Brassica carinata HOM05D006309 ORTHO05D007937 2.0e-35 152.5 119 65.5
C09p23680 Brassica napus HOM05D006309 ORTHO05D007937 2.0e-35 152.5 119 65.5
BraA09t37510Z Brassica rapa HOM05D006309 ORTHO05D007937 2.0e-35 152.5 119 65.5
Medtr1g484930 Medicago truncatula HOM05D006309 ORTHO05D007937 2.0e-35 152.5 120 63.3
ATR0796G010 Amborella trichopoda HOM05D006309 ORTHO05D007937 2.6e-35 152.1 118 66.1
Ciclev10013195m.g Citrus clementina HOM05D006309 ORTHO05D007937 2.6e-35 152.1 120 65.8
Thecc.03G310900 Theobroma cacao HOM05D006309 ORTHO05D007937 2.6e-35 152.1 120 65.8
BolC9t55290H Brassica oleracea HOM05D006309 ORTHO05D007937 4.5e-35 151.4 119 64.7
MD12G1199900 Malus domestica HOM05D006309 ORTHO05D007937 4.5e-35 151.4 120 65.0
ECA233G1704 Erigeron canadensis HOM05D006309 ORTHO05D007937 5.9e-35 151.0 120 64.2
Gohir.D08G174300 Gossypium hirsutum HOM05D006309 ORTHO05D007937 5.9e-35 151.0 119 65.5
Gorai.004G182000 Gossypium raimondii HOM05D006309 ORTHO05D007937 5.9e-35 151.0 119 65.5
Sp1g28800 Schrenkiella parvula HOM05D006309 ORTHO05D007937 5.9e-35 151.0 119 64.7
Sc16g0009400 Simmondsia chinensis HOM05D006309 ORTHO05D007937 5.9e-35 151.0 117 65.0
EL10Ac4g09558 Beta vulgaris HOM05D006309 ORTHO05D007937 7.7e-35 150.6 116 67.2
Thhalv10010969m.g Eutrema salsugineum HOM05D006309 ORTHO05D007937 7.7e-35 150.6 119 65.5
Glyma.20G090800 Glycine max HOM05D006309 ORTHO05D007937 7.7e-35 150.6 120 65.0
Glyma.20G092200 Glycine max HOM05D006309 ORTHO05D007937 7.7e-35 150.6 120 65.0
A09p18900 Brassica napus HOM05D006309 ORTHO05D007937 1.0e-34 150.2 119 64.7
Sp2g05970 Schrenkiella parvula HOM05D006309 ORTHO05D007937 1.0e-34 150.2 119 63.9
CiPaw.04G111200 Carya illinoinensis HOM05D006309 ORTHO05D007937 1.3e-34 149.8 120 65.0
Gohir.A08G153400 Gossypium hirsutum HOM05D006309 ORTHO05D007937 1.3e-34 149.8 119 65.5
Lsat_1_v5_gn_1_112940 Lactuca sativa HOM05D006309 ORTHO05D007937 1.3e-34 149.8 119 63.9
CANSAT54G2801 Cannabis sativa HOM05D006309 ORTHO05D007937 1.7e-34 149.4 120 65.8
CDE09G0003 Ceratophyllum demersum HOM05D006309 ORTHO05D007937 1.7e-34 149.4 119 63.0
Hma1.2p1_0759F.1_g213920 Hydrangea macrophylla HOM05D006309 ORTHO05D007937 1.7e-34 149.4 116 66.4
CiPaw.07G036200 Carya illinoinensis HOM05D006309 ORTHO05D007937 2.2e-34 149.1 120 64.2
Potri.005G002900 Populus trichocarpa HOM05D006309 ORTHO05D007937 2.9e-34 148.7 120 64.2
FvH4_6g08490 Fragaria vesca HOM05D006309 ORTHO05D007937 3.8e-34 148.3 120 64.2
FAN02G0285 Fragaria x ananassa HOM05D006309 ORTHO05D007937 3.8e-34 148.3 120 64.2
FAN05G1622 Fragaria x ananassa HOM05D006309 ORTHO05D007937 3.8e-34 148.3 120 64.2
FAN09G1610 Fragaria x ananassa HOM05D006309 ORTHO05D007937 3.8e-34 148.3 120 64.2
FAN14G3239 Fragaria x ananassa HOM05D006309 ORTHO05D007937 3.8e-34 148.3 120 64.2
Sabra05G0000300 Salix brachista HOM05D006309 ORTHO05D007937 3.8e-34 148.3 140 57.1
Sabra05G0014400 Salix brachista HOM05D006309 ORTHO05D007937 3.8e-34 148.3 140 57.1
TPR.G2591 Trifolium pratense HOM05D006309 ORTHO05D007937 3.8e-34 148.3 120 60.8
TWI36G0052 Tripterygium wilfordii HOM05D006309 ORTHO05D007937 3.8e-34 148.3 120 65.0
Haze_03988 Corylus avellana HOM05D006309 ORTHO05D007937 6.5e-34 147.5 120 64.2
Aa31LG2G11310 Aethionema arabicum HOM05D006309 ORTHO05D007937 8.5e-34 147.1 119 63.0
GSVIVG01031328001 Vitis vinifera HOM05D006309 ORTHO05D007937 8.5e-34 147.1 120 62.5
RcHm_v2.0_Chr3g0458531 Rosa chinensis HOM05D006309 ORTHO05D007937 1.9e-33 146.0 120 63.3
HanXRQChr08g0212181 Helianthus annuus HOM05D006309 ORTHO05D007937 3.2e-33 145.2 115 64.3
AL1G67090 Arabidopsis lyrata HOM05D006309 ORTHO05D007937 4.2e-33 144.8 116 63.8
Lj4g0016187 Lotus japonicus HOM05D006309 ORTHO05D007937 4.2e-33 144.8 120 62.5
Sc09g0002420 Simmondsia chinensis HOM05D006309 ORTHO05D007937 4.2e-33 144.8 120 60.0
Carub.0002s0712 Capsella rubella HOM05D006309 ORTHO05D007937 7.2e-33 144.1 116 62.9
CARHR288700 Cardamine hirsuta HOM05D006309 ORTHO05D007937 7.2e-33 144.1 119 61.3
FvH4_2g19190 Fragaria vesca HOM05D006309 ORTHO05D007937 1.6e-32 142.9 120 62.5
FAN24G3038 Fragaria x ananassa HOM05D006309 ORTHO05D007937 1.6e-32 142.9 120 62.5
AT1G57540 Arabidopsis thaliana HOM05D006309 ORTHO05D007937 2.1e-32 142.5 116 62.1
Aqoxy2G02488 Aquilegia oxysepala HOM05D006309 ORTHO05D007937 2.7e-32 142.1 116 60.3
Os01g0250600 Oryza sativa ssp. japonica HOM05D006309 ORTHO05D007937 2.7e-32 142.1 117 60.7
THA.LOC104820476 Tarenaya hassleriana HOM05D006309 ORTHO05D007937 4.7e-32 141.4 116 60.3
unitig_62.g23615 Utricularia gibba HOM05D006309 ORTHO05D007937 4.7e-32 141.4 120 62.5
FAN15G2822 Fragaria x ananassa HOM05D006309 ORTHO05D007937 3.0e-31 138.7 120 60.8
PSO210G0390 Papaver somniferum HOM05D006309 ORTHO05D007937 1.5e-30 136.3 117 59.8
PSO761G0726 Papaver somniferum HOM05D006309 ORTHO05D007937 1.5e-30 136.3 117 59.8
EL10Ac4g07573 Beta vulgaris HOM05D006309 ORTHO05D007937 2.6e-30 135.6 120 60.8
Prupe.8G045300 Prunus persica HOM05D006309 ORTHO05D007937 2.6e-30 135.6 117 62.4
MBI18_g10373_MAGBIO Magnolia biondii HOM05D006309 ORTHO05D007937 5.3e-28 127.9 120 59.2
Cfa012394 Carpinus fangiana HOM05D006309 ORTHO05D007937 9.1e-28 127.1 107 62.6
Dinv30948 Davidia involucrata HOM05D006309 ORTHO05D007937 9.7e-22 107.1 96 59.4
HanXRQChr06g0180851 Helianthus annuus HOM05D006309 ORTHO05D007937 4.5e-19 98.2 49 91.8
HanXRQChr16g0506271 Helianthus annuus HOM05D006309 ORTHO05D007937 4.5e-19 98.2 49 91.8
Mapoly0075s0044 Marchantia polymorpha HOM05D006309 ORTHO05D007937 1.3e-18 96.7 118 43.2
Pp3c8_1240 Physcomitrium patens HOM05D006309 ORTHO05D007937 7.2e-17 90.9 118 40.7
DCAR_029292 Daucus carota HOM05D002465 ORTHO05D005308 1.5e-14 83.2 49 77.6
Zm00001eb239560 Zea mays HOM05D006309 ORTHO05D007937 2.6e-14 82.4 52 71.2
COL.COLO4_16932 Corchorus olitorius HOM05D006309 ORTHO05D007937 4.4e-14 81.6 47 80.9
Glyma.09G093300 Glycine max HOM05D006309 ORTHO05D000504 4.4e-14 81.6 49 73.5
MBI06_g06498_MAGBIO Magnolia biondii HOM05D006309 ORTHO05D007937 7.5e-14 80.9 47 80.9
BNapus_Darmor_BZH_scaffold_223p00020 Brassica napus HOM05D006309 ORTHO05D007937 3.3e-09 65.5 39 79.5
Potri.013G002301 Populus trichocarpa HOM05D006309 ORTHO05D007937 3.3e-09 65.5 41 78.0
TAR627G1128 Trochodendron aralioides HOM05D006309 ORTHO05D007937 7.5e-06 54.3 35 77.1


User provided reference genes

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