Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G1856 Salvia bowleyana HOM05D006803 ORTHO05D008552 8.7e-90 333.6 164 100.0
SalBow4G1881 Salvia bowleyana HOM05D006803 ORTHO05D008552 8.7e-90 333.6 164 100.0
Migut.F00254 Erythranthe guttata HOM05D006803 ORTHO05D008552 1.7e-69 266.2 164 79.9
SGA_v2.0_scaffold44G16771 Striga asiatica HOM05D006803 ORTHO05D008552 2.2e-64 249.2 164 76.2
vmacro06587 Vaccinium macrocarpon HOM05D006803 ORTHO05D008552 4.1e-55 218.4 164 68.3
Hma1.2p1_0327F.1_g126650 Hydrangea macrophylla HOM05D006803 ORTHO05D008552 1.2e-54 216.9 167 65.9
Oeu044167.1 Olea europaea HOM05D006803 ORTHO05D008552 1.6e-54 216.5 164 68.9
Actinidia34181 Actinidia chinensis HOM05D006803 ORTHO05D008552 1.7e-53 213.0 167 68.3
Peaxi162Scf00904g00457 Petunia axillaris HOM05D006803 ORTHO05D008552 2.3e-53 212.6 146 71.9
MBI06_g04289_MAGBIO Magnolia biondii HOM05D006803 ORTHO05D008552 1.5e-52 209.9 170 66.5
Ciclev10006070m.g Citrus clementina HOM05D006803 ORTHO05D008552 1.2e-51 206.8 170 62.9
Dinv28351 Davidia involucrata HOM05D006803 ORTHO05D008552 1.6e-51 206.5 150 67.3
PGSC0003DMG400009065 Solanum tuberosum HOM05D006803 ORTHO05D008552 2.1e-51 206.1 156 67.3
Sopen03g003500 Solanum pennellii HOM05D006803 ORTHO05D008552 6.1e-51 204.5 156 66.7
unitig_37.g11977 Utricularia gibba HOM05D000211 ORTHO05D002285 6.1e-51 204.5 124 79.8
Manes.14G019756 Manihot esculenta HOM05D006803 ORTHO05D008552 8.0e-51 204.1 143 67.1
Nn1g01776 Nelumbo nucifera HOM05D006803 ORTHO05D008552 2.3e-50 202.6 170 64.1
Solyc03g007540.3 Solanum lycopersicum HOM05D006803 ORTHO05D008552 3.0e-50 202.2 167 64.1
TWI14G0759 Tripterygium wilfordii HOM05D006803 ORTHO05D008552 4.0e-50 201.8 159 67.9
Prupe.2G305500 Prunus persica HOM05D006803 ORTHO05D008552 5.2e-50 201.4 164 62.8
QL09p011586 Quercus lobata HOM05D006803 ORTHO05D008552 8.9e-50 200.7 147 66.7
GSVIVG01028745001 Vitis vinifera HOM05D006803 ORTHO05D008552 8.9e-50 200.7 165 67.3
CiPaw.05G259100 Carya illinoinensis HOM05D006803 ORTHO05D008552 1.2e-49 200.3 162 64.8
Duzib084G0216 Durio zibethinus HOM05D006803 ORTHO05D008552 1.2e-49 200.3 155 68.4
Gohir.D08G108400 Gossypium hirsutum HOM05D006803 ORTHO05D008552 1.2e-49 200.3 136 72.8
Gorai.004G116000 Gossypium raimondii HOM05D006803 ORTHO05D008552 1.2e-49 200.3 136 72.8
Potri.012G033700 Populus trichocarpa HOM05D006803 ORTHO05D008552 1.2e-49 200.3 172 59.3
CAN.G108.11 Capsicum annuum HOM05D006803 ORTHO05D008552 1.5e-49 199.9 169 64.5
COL.COLO4_07418 Corchorus olitorius HOM05D006803 ORTHO05D008552 1.5e-49 199.9 168 64.9
Hund11694 Selenicereus undatus HOM05D006803 ORTHO05D008552 2.0e-49 199.5 158 68.4
TAR333G0006 Trochodendron aralioides HOM05D006803 ORTHO05D008552 2.0e-49 199.5 156 66.0
Sed0009140 Sechium edule HOM05D006803 ORTHO05D008552 9.8e-49 197.2 155 64.5
A10p10450 Brassica napus HOM05D006803 ORTHO05D008552 1.3e-48 196.8 169 62.7
HanXRQChr09g0253111 Helianthus annuus HOM05D006803 ORTHO05D008552 1.3e-48 196.8 141 67.4
MD01G1213500 Malus domestica HOM05D006803 ORTHO05D008552 1.3e-48 196.8 165 60.6
PGR142G1334 Punica granatum HOM05D006803 ORTHO05D008552 1.7e-48 196.4 154 66.2
FAN01G0710 Fragaria x ananassa HOM05D006803 ORTHO05D008552 2.8e-48 195.7 110 80.9
FAN06G1048 Fragaria x ananassa HOM05D006803 ORTHO05D008552 2.8e-48 195.7 110 80.9
FAN06G4527 Fragaria x ananassa HOM05D006803 ORTHO05D008552 2.8e-48 195.7 110 80.9
FAN10G2870 Fragaria x ananassa HOM05D006803 ORTHO05D008552 2.8e-48 195.7 110 80.9
Lsat_1_v5_gn_9_57340 Lactuca sativa HOM05D006803 ORTHO05D008552 2.8e-48 195.7 150 66.7
RcHm_v2.0_Chr1g0379821 Rosa chinensis HOM05D006803 ORTHO05D008552 2.8e-48 195.7 110 80.9
Carub.0008s1314 Capsella rubella HOM05D006803 ORTHO05D008552 3.7e-48 195.3 174 60.3
FAN03G2299 Fragaria x ananassa HOM05D006803 ORTHO05D008552 3.7e-48 195.3 110 80.0
Potri.016G123100 Populus trichocarpa HOM05D006803 ORTHO05D008552 3.7e-48 195.3 142 66.9
BraA10t43128Z Brassica rapa HOM05D006803 ORTHO05D008552 4.9e-48 194.9 170 62.9
Atru.chr1.293 Acer truncatum HOM05D006803 ORTHO05D008552 6.3e-48 194.5 181 58.0
ClCG05G008590 Citrullus lanatus HOM05D006803 ORTHO05D008552 6.3e-48 194.5 158 63.3
FvH4_7g30800 Fragaria vesca HOM05D006803 ORTHO05D008552 6.3e-48 194.5 110 80.0
Actinidia08612 Actinidia chinensis HOM05D006803 ORTHO05D008552 1.1e-47 193.7 167 62.9
Sp6g15120 Schrenkiella parvula HOM05D006803 ORTHO05D008552 1.1e-47 193.7 172 62.2
C09p42680 Brassica napus HOM05D006803 ORTHO05D008552 1.4e-47 193.4 169 62.1
BolC9t57144H Brassica oleracea HOM05D006803 ORTHO05D008552 1.4e-47 193.4 169 62.1
Gohir.A08G097600 Gossypium hirsutum HOM05D006803 ORTHO05D008552 1.4e-47 193.4 136 70.6
Lj3C914T13 Lonicera japonica HOM05D006803 ORTHO05D008552 1.8e-47 193.0 153 66.7
AL8G27460 Arabidopsis lyrata HOM05D006803 ORTHO05D008552 2.4e-47 192.6 171 60.2
Sc19g0001080 Simmondsia chinensis HOM05D006803 ORTHO05D008552 2.4e-47 192.6 170 62.9
Thhalv10014833m.g Eutrema salsugineum HOM05D006803 ORTHO05D008552 3.1e-47 192.2 174 60.3
Rhsim03G0197200 Rhododendron simsii HOM05D006803 ORTHO05D008552 3.1e-47 192.2 157 64.3
Thecc.03G190700 Theobroma cacao HOM05D006803 ORTHO05D008552 3.1e-47 192.2 166 62.0
Aa31LG3G9190 Aethionema arabicum HOM05D006803 ORTHO05D008552 4.1e-47 191.8 171 58.5
Aqoxy7G00212 Aquilegia oxysepala HOM05D006803 ORTHO05D008552 4.1e-47 191.8 172 61.6
MD07G1283300 Malus domestica HOM05D006803 ORTHO05D008552 4.1e-47 191.8 130 70.8
Cpa.g.sc3.33 Carica papaya HOM05D006803 ORTHO05D008552 5.4e-47 191.4 171 62.6
Cc02_g02040 Coffea canephora HOM05D006803 ORTHO05D008552 7.0e-47 191.0 169 61.5
Eucgr.K00316 Eucalyptus grandis HOM05D006803 ORTHO05D008552 7.0e-47 191.0 136 70.6
THA.LOC104825126 Tarenaya hassleriana HOM05D006803 ORTHO05D008552 7.0e-47 191.0 170 61.2
AT5G52960 Arabidopsis thaliana HOM05D006803 ORTHO05D008552 9.2e-47 190.7 172 59.3
MELO3C006968.2 Cucumis melo HOM05D006803 ORTHO05D008552 9.2e-47 190.7 162 63.0
PSO135G0887 Papaver somniferum HOM05D006803 ORTHO05D008552 9.2e-47 190.7 153 63.4
CDE04G2534 Ceratophyllum demersum HOM05D006803 ORTHO05D008552 2.0e-46 189.5 150 66.0
Ca_19336_v3 Cicer arietinum L. HOM05D006803 ORTHO05D008552 3.5e-46 188.7 164 59.1
TWI39G0241 Tripterygium wilfordii HOM05D006803 ORTHO05D008552 3.5e-46 188.7 132 71.2
VMungo0464G0281 Vigna mungo HOM05D006803 ORTHO05D008552 4.5e-46 188.3 166 63.3
PSO384G2893 Papaver somniferum HOM05D006803 ORTHO05D008552 5.9e-46 188.0 135 68.9
TPR.G36689 Trifolium pratense HOM05D006803 ORTHO05D008552 5.9e-46 188.0 109 80.7
CSS0034587 Camellia sinensis var. sinensis HOM05D006803 ORTHO05D008552 1.0e-45 187.2 96 87.5
Phvul.004G101300 Phaseolus vulgaris HOM05D006803 ORTHO05D008552 1.0e-45 187.2 110 80.0
Glyma.09G125800 Glycine max HOM05D006803 ORTHO05D008552 1.3e-45 186.8 169 61.5
arahy.Tifrunner.gnm1.ann1.GHK1U8 Arachis hypogaea HOM05D006803 ORTHO05D008552 1.7e-45 186.4 172 59.9
arahy.Tifrunner.gnm1.ann1.V6YLC6 Arachis hypogaea HOM05D006803 ORTHO05D008552 1.7e-45 186.4 172 59.9
Duzib205G0804 Durio zibethinus HOM05D006803 ORTHO05D008552 2.9e-45 185.7 136 67.6
ATR0721G182 Amborella trichopoda HOM05D006803 ORTHO05D008552 3.8e-45 185.3 129 71.3
CANSAT21G0672 Cannabis sativa HOM05D006803 ORTHO05D008552 5.0e-45 184.9 97 85.6
EL10Ac3g05364 Beta vulgaris HOM05D006803 ORTHO05D008552 6.6e-45 184.5 155 62.6
Sed0024434 Sechium edule HOM05D006803 ORTHO05D008552 6.6e-45 184.5 151 62.9
DCAR_014527 Daucus carota HOM05D006803 ORTHO05D008552 1.1e-44 183.7 159 61.0
Sabra15G0018100 Salix brachista HOM05D006803 ORTHO05D008552 1.1e-44 183.7 163 57.7
Psat1g097000 Pisum sativum HOM05D006803 ORTHO05D008552 1.5e-44 183.3 165 62.4
CDE03G0029 Ceratophyllum demersum HOM05D006803 ORTHO05D008552 4.3e-44 181.8 151 63.6
Mapoly0006s0111 Marchantia polymorpha HOM05D006803 ORTHO05D008552 5.6e-44 181.4 113 69.9
Sabra15G0020600 Salix brachista HOM05D006803 ORTHO05D008552 1.6e-43 179.9 184 52.7
Glyma.16G172700 Glycine max HOM05D006803 ORTHO05D008552 3.6e-43 178.7 109 76.1
Lalb_Chr01g0009661 Lupinus albus HOM05D006803 ORTHO05D008552 3.6e-43 178.7 168 58.3
Medtr6g034205 Medicago truncatula HOM05D006803 ORTHO05D008552 1.4e-42 176.8 132 68.2
ECA232G4170 Erigeron canadensis HOM05D006803 ORTHO05D008552 3.0e-42 175.6 97 83.5
Lj2g0024519 Lotus japonicus HOM05D006803 ORTHO05D008552 6.8e-42 174.5 157 58.6
Os05g0569200 Oryza sativa ssp. japonica HOM05D006803 ORTHO05D008552 6.8e-42 174.5 96 81.2
Zm00001eb296320 Zea mays HOM05D006803 ORTHO05D008552 1.2e-41 173.7 96 81.2
SEGI_13941 Sequoiadendron giganteum HOM05D006803 ORTHO05D008552 5.8e-41 171.4 109 70.6
Sabra12G0022800 Salix brachista HOM05D006803 ORTHO05D008552 1.3e-40 170.2 221 43.9
SMO169G0228 Selaginella moellendorffii HOM05D006803 ORTHO05D008552 2.2e-40 169.5 111 68.5
Nitab4.5_0000472g0050 Nicotiana tabacum HOM05D006803 ORTHO05D008552 2.4e-39 166.0 155 61.3
Nitab4.5_0001331g0090 Nicotiana tabacum HOM05D006803 ORTHO05D008552 1.6e-38 163.3 155 60.6
AagrBONN_evm.TU.Sc2ySwM_228.1351 Anthoceros agrestis HOM05D006803 ORTHO05D008552 4.6e-38 161.8 151 58.9
Pp3c4_26620 Physcomitrium patens HOM05D006803 ORTHO05D008552 5.0e-37 158.3 91 74.7
Pp3c26_8430 Physcomitrium patens HOM05D006803 ORTHO05D008552 7.3e-36 154.5 88 76.1
Haze_00093 Corylus avellana HOM05D006803 ORTHO05D008552 2.6e-33 146.0 139 58.3
BcaB08g35659 Brassica carinata HOM05D006803 ORTHO05D008552 1.3e-32 143.7 133 57.1
CBR_g9073 Chara braunii HOM05D006803 ORTHO05D008552 3.7e-32 142.1 105 62.9
CARHR265930 Cardamine hirsuta HOM05D006803 ORTHO05D008552 6.4e-32 141.4 141 56.0
Oeu008094.1 Olea europaea HOM05D006803 ORTHO05D008552 9.2e-31 137.5 120 60.8
Oeu059693.1 Olea europaea HOM05D006803 ORTHO05D008552 1.9e-28 129.8 120 59.2
Eucgr.L03342 Eucalyptus grandis HOM05D006803 ORTHO05D008552 9.5e-28 127.5 95 63.2
HPP92_011456 Vanilla planifolia HOM05D006803 ORTHO05D008552 4.0e-26 122.1 65 84.6
Oeu059677.1 Olea europaea HOM05D006803 ORTHO05D008552 2.0e-25 119.8 74 73.0
Thecc.03G190900 Theobroma cacao HOM05D006803 ORTHO05D008552 4.7e-11 72.0 36 94.4
RcHm_v2.0_Chr1g0379761 Rosa chinensis HOM05D006803 ORTHO05D008552 5.2e-10 68.6 35 88.6


User provided reference genes

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