Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G1854 Salvia bowleyana HOM05D006886 ORTHO05D008494 6.0e-39 163.7 82 100.0
Migut.A00389 Erythranthe guttata HOM05D006886 ORTHO05D008494 5.6e-29 130.6 81 82.7
MSTRG.11790 Avicennia marina HOM05D006886 ORTHO05D008494 2.9e-25 118.2 81 72.8
SGA_v2.0_scaffold27G11627 Striga asiatica HOM05D006886 ORTHO05D008494 1.1e-24 116.3 81 76.5
Sopen08g002580 Solanum pennellii HOM05D006886 ORTHO05D008494 8.7e-22 106.7 81 66.7
Dinv03403 Davidia involucrata HOM05D006886 ORTHO05D008494 1.1e-21 106.3 82 67.1
Nitab4.5_0000264g0070 Nicotiana tabacum HOM05D006886 ORTHO05D008494 1.9e-21 105.5 81 66.7
Solyc08g006630.3 Solanum lycopersicum HOM05D006886 ORTHO05D008494 2.5e-21 105.1 81 65.4
Actinidia22280 Actinidia chinensis HOM05D006886 ORTHO05D008494 4.3e-21 104.4 82 65.9
Cfa013010 Carpinus fangiana HOM05D006886 ORTHO05D008494 9.6e-21 103.2 83 62.7
PGSC0003DMG400026287 Solanum tuberosum HOM05D006886 ORTHO05D008494 9.6e-21 103.2 81 64.2
Duzib168G1824 Durio zibethinus HOM05D006886 ORTHO05D008494 1.3e-20 102.8 82 64.6
CAN.G285.18 Capsicum annuum HOM05D006886 ORTHO05D008494 3.7e-20 101.3 81 63.0
CiPaw.07G233000 Carya illinoinensis HOM05D006886 ORTHO05D008494 3.7e-20 101.3 82 61.0
Lsat_1_v5_gn_3_22560 Lactuca sativa HOM05D006886 ORTHO05D008494 8.1e-20 100.1 78 64.1
Oeu010292.1 Olea europaea HOM05D006886 ORTHO05D008494 8.1e-20 100.1 82 64.6
Cc08_g07710 Coffea canephora HOM05D006886 ORTHO05D008494 2.4e-19 98.6 82 59.8
Peaxi162Scf00045g01941 Petunia axillaris HOM05D006886 ORTHO05D008494 2.4e-19 98.6 80 62.5
Duzib187G0928 Durio zibethinus HOM05D006886 ORTHO05D008494 3.1e-19 98.2 82 62.2
Potri.018G016300 Populus trichocarpa HOM05D006886 ORTHO05D008494 9.0e-19 96.7 82 57.3
Actinidia14002 Actinidia chinensis HOM05D006886 ORTHO05D008494 1.2e-18 96.3 79 60.8
Cpa.g.sc148.45 Carica papaya HOM05D006886 ORTHO05D008494 1.2e-18 96.3 82 61.0
Sc17g0004260 Simmondsia chinensis HOM05D006886 ORTHO05D008494 1.2e-18 96.3 84 60.7
GSVIVG01036001001 Vitis vinifera HOM05D006886 ORTHO05D008494 1.2e-18 96.3 83 61.4
ECA246G1281 Erigeron canadensis HOM05D006886 ORTHO05D008494 2.0e-18 95.5 78 61.5
HanXRQChr17g0536351 Helianthus annuus HOM05D006886 ORTHO05D008494 2.0e-18 95.5 83 60.2
Lj7A737T48 Lonicera japonica HOM05D006886 ORTHO05D008494 2.6e-18 95.1 83 61.4
Gohir.A07G033700 Gossypium hirsutum HOM05D006886 ORTHO05D008494 5.8e-18 94.0 82 61.0
Manes.16G132100 Manihot esculenta HOM05D006886 ORTHO05D008494 5.8e-18 94.0 81 56.8
Hma1.2p1_0355F.1_g133950 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 1.0e-17 93.2 79 59.5
Haze_21375 Corylus avellana HOM05D006886 ORTHO05D008494 1.7e-17 92.4 78 57.7
MBI15_g26075_MAGBIO Magnolia biondii HOM05D006886 ORTHO05D008494 1.7e-17 92.4 82 57.3
Cfa001083 Carpinus fangiana HOM05D006886 ORTHO05D008494 2.2e-17 92.0 83 56.6
COL.COLO4_18973 Corchorus olitorius HOM05D006886 ORTHO05D008494 6.5e-17 90.5 82 58.5
TPR.G38843 Trifolium pratense HOM05D006886 ORTHO05D008494 6.5e-17 90.5 82 54.9
Rhsim02G0217500 Rhododendron simsii HOM05D006886 ORTHO05D008494 8.4e-17 90.1 78 60.3
Sabra18G0019800 Salix brachista HOM05D006886 ORTHO05D008494 1.1e-16 89.7 92 52.2
vmacro11273 Vaccinium macrocarpon HOM05D006886 ORTHO05D008494 3.2e-16 88.2 81 58.0
Eucgr.F04206 Eucalyptus grandis HOM05D006886 ORTHO05D008494 7.1e-16 87.0 82 51.2
Medtr1g013640 Medicago truncatula HOM05D006886 ORTHO05D008494 7.1e-16 87.0 82 52.4
CANSAT25G2371 Cannabis sativa HOM05D006886 ORTHO05D008494 9.3e-16 86.7 82 53.7
QL02p018037 Quercus lobata HOM05D006886 ORTHO05D008494 1.2e-15 86.3 79 57.0
EL10Ac2g02461 Beta vulgaris HOM05D006886 ORTHO05D008494 1.6e-15 85.9 82 51.2
MD08G1052100 Malus domestica HOM05D006886 ORTHO05D008494 1.6e-15 85.9 78 57.7
MD15G1043400 Malus domestica HOM05D006886 ORTHO05D008494 1.6e-15 85.9 78 57.7
TWI63G0132 Tripterygium wilfordii HOM05D006886 ORTHO05D008494 1.6e-15 85.9 82 53.7
Ah.15g098740 Amaranthus hybridus HOM05D006886 ORTHO05D008494 3.5e-15 84.7 82 52.4
CDE04G0647 Ceratophyllum demersum HOM05D006886 ORTHO05D008494 3.5e-15 84.7 82 52.4
ClCG05G016110 Citrullus lanatus HOM05D006886 ORTHO05D008494 3.5e-15 84.7 81 49.4
Lj5g0011023 Lotus japonicus HOM05D006886 ORTHO05D008494 3.5e-15 84.7 82 54.9
Lalb_Chr14g0361721 Lupinus albus HOM05D006886 ORTHO05D008494 3.5e-15 84.7 82 51.2
RcHm_v2.0_Chr6g0299191 Rosa chinensis HOM05D006886 ORTHO05D008494 3.5e-15 84.7 81 51.9
CsaV3_4G036380 Cucumis sativus L. HOM05D006886 ORTHO05D008494 4.6e-15 84.3 82 47.6
Aqoxy7G03293 Aquilegia oxysepala HOM05D006886 ORTHO05D008494 6.0e-15 84.0 82 52.4
AUR62032440 Chenopodium quinoa HOM05D006886 ORTHO05D008494 7.9e-15 83.6 82 51.2
Sed0006692 Sechium edule HOM05D006886 ORTHO05D008494 7.9e-15 83.6 81 49.4
Ca_13077_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 1.3e-14 82.8 81 53.1
Ciclev10010834m.g Citrus clementina HOM05D006886 ORTHO05D008494 1.3e-14 82.8 82 48.8
PSO063G3428 Papaver somniferum HOM05D006886 ORTHO05D008494 1.3e-14 82.8 82 52.4
Hund25607 Selenicereus undatus HOM05D006886 ORTHO05D008494 1.3e-14 82.8 82 48.8
A09p55990 Brassica napus HOM05D006886 ORTHO05D008494 3.0e-14 81.6 82 52.4
A09p56060 Brassica napus HOM05D006886 ORTHO05D008494 3.0e-14 81.6 82 52.4
BraA09t41001Z Brassica rapa HOM05D006886 ORTHO05D008494 3.0e-14 81.6 82 52.4
Carub.0004s0454 Capsella rubella HOM05D006886 ORTHO05D008494 3.0e-14 81.6 82 54.9
Thhalv10000363m.g Eutrema salsugineum HOM05D006886 ORTHO05D008494 3.0e-14 81.6 82 53.7
BcaB08g35125 Brassica carinata HOM05D006886 ORTHO05D008494 3.9e-14 81.3 82 51.2
Sp4g03960 Schrenkiella parvula HOM05D006886 ORTHO05D008494 3.9e-14 81.3 82 52.4
arahy.Tifrunner.gnm1.ann1.QF2P07 Arachis hypogaea HOM05D006886 ORTHO05D008494 5.1e-14 80.9 79 50.6
PSO782G0555 Papaver somniferum HOM05D006886 ORTHO05D008494 5.1e-14 80.9 82 51.2
AL4G16050 Arabidopsis lyrata HOM05D006886 ORTHO05D008494 6.7e-14 80.5 82 53.7
Atru.chr7.2575 Acer truncatum HOM05D006886 ORTHO05D008494 8.7e-14 80.1 78 53.8
CARHR116750 Cardamine hirsuta HOM05D006886 ORTHO05D008494 1.1e-13 79.7 82 51.2
Glyma.17G221700 Glycine max HOM05D006886 ORTHO05D008494 1.5e-13 79.3 82 51.2
THA.LOC104819952 Tarenaya hassleriana HOM05D006886 ORTHO05D008494 1.5e-13 79.3 81 49.4
AT2G24970 Arabidopsis thaliana HOM05D006886 ORTHO05D008494 9.6e-13 76.6 82 50.0
CSS0014970 Camellia sinensis var. sinensis HOM05D006886 ORTHO05D008494 9.6e-13 76.6 53 67.9
Phvul.001G042700 Phaseolus vulgaris HOM05D006886 ORTHO05D008494 1.3e-12 76.3 82 48.8
Gorai.001G038900 Gossypium raimondii HOM05D006886 ORTHO05D008494 1.6e-12 75.9 55 65.5
BcaC07g40900 Brassica carinata HOM05D006886 ORTHO05D008494 2.8e-12 75.1 82 48.8
C08p38980 Brassica napus HOM05D006886 ORTHO05D008494 2.8e-12 75.1 82 48.8
BolC8t51472H Brassica oleracea HOM05D006886 ORTHO05D008494 2.8e-12 75.1 82 48.8
ATR0580G343 Amborella trichopoda HOM05D006886 ORTHO05D008494 8.2e-12 73.6 80 46.2
Glyma.14G104300 Glycine max HOM05D006886 ORTHO05D008494 8.2e-12 73.6 82 48.8
Nn2g12469 Nelumbo nucifera HOM05D006886 ORTHO05D008494 1.1e-11 73.2 57 57.9
Psat6g024960 Pisum sativum HOM05D006886 ORTHO05D008494 1.1e-11 73.2 82 47.6
MELO3C032324.2 Cucumis melo HOM05D006886 ORTHO05D008494 4.0e-11 71.2 99 39.4
TAR625G1053 Trochodendron aralioides HOM05D006886 ORTHO05D008494 5.3e-11 70.9 56 58.9
PGR042G1056 Punica granatum HOM05D006886 ORTHO05D008494 6.9e-11 70.5 78 46.2
Thecc.09G013300 Theobroma cacao HOM05D006886 ORTHO05D008494 9.0e-11 70.1 55 56.4
arahy.Tifrunner.gnm1.ann1.5WK6RP Arachis hypogaea HOM05D006886 ORTHO05D008494 1.1e-08 63.2 55 50.9
Prupe.1G396800 Prunus persica HOM05D006886 ORTHO05D008494 1.1e-08 63.2 55 50.9
FAN27G2382 Fragaria x ananassa HOM05D006886 ORTHO05D008494 1.9e-08 62.4 55 50.9
Dinv16422 Davidia involucrata HOM05D006886 ORTHO05D008494 1.2e-07 59.7 44 65.9
Zm00001eb192560 Zea mays HOM05D006886 ORTHO05D008494 1.6e-07 59.3 78 42.3
CAN.G285.15 Capsicum annuum HOM05D006886 ORTHO05D008494 3.5e-07 58.2 45 60.0
AUR62024781 Chenopodium quinoa HOM05D006886 ORTHO05D008494 4.6e-07 57.8 50 54.0
Pp3c17_11010 Physcomitrium patens HOM05D006886 ORTHO05D008494 1.0e-06 56.6 78 42.3
VMungo0647G1481 Vigna mungo HOM05D006886 ORTHO05D008494 1.8e-06 55.8 56 46.4
Ca_06796_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 2.3e-06 55.5 70 42.9
Cfa023326 Carpinus fangiana HOM05D006886 ORTHO05D008494 3.9e-06 54.7 41 56.1


User provided reference genes

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