Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G1824 Salvia bowleyana HOM05D007706 ORTHO05D009593 4.2e-150 535.0 346 100.0
MSTRG.18353 Avicennia marina HOM05D007706 ORTHO05D009593 1.6e-48 197.6 294 46.9
Migut.D00475 Erythranthe guttata HOM05D007706 ORTHO05D009593 9.0e-44 181.8 282 45.7
Cc01_g17810 Coffea canephora HOM05D007706 ORTHO05D009593 1.6e-40 171.0 277 46.6
Nitab4.5_0007992g0040 Nicotiana tabacum HOM05D007706 ORTHO05D009593 5.1e-39 166.0 280 44.6
Migut.N02230 Erythranthe guttata HOM05D007706 ORTHO05D009593 1.4e-36 157.9 271 42.4
PGSC0003DMG400008584 Solanum tuberosum HOM05D007706 ORTHO05D009593 4.0e-36 156.4 283 42.8
Sopen09g025790 Solanum pennellii HOM05D007706 ORTHO05D009593 6.4e-34 149.1 284 42.6
Solyc09g064630.3 Solanum lycopersicum HOM05D007706 ORTHO05D009593 9.3e-33 145.2 286 42.3
SGA_v2.0_scaffold1G00652 Striga asiatica HOM05D007706 ORTHO05D009593 1.3e-31 141.4 277 41.9
Nn3g19784 Nelumbo nucifera HOM05D007706 ORTHO05D009593 1.3e-29 134.8 280 42.1
Peaxi162Scf00043g02924 Petunia axillaris HOM05D007706 ORTHO05D009593 1.1e-28 131.7 263 41.4
Aqoxy5G00146 Aquilegia oxysepala HOM05D007706 ORTHO05D009593 4.0e-28 129.8 286 39.2
Lj1g0013336 Lotus japonicus HOM05D007706 ORTHO05D009593 1.2e-27 128.3 284 40.8
Rhsim13G0040100 Rhododendron simsii HOM05D007706 ORTHO05D009593 2.0e-27 127.5 301 38.5
TPR.G30860 Trifolium pratense HOM05D003225 ORTHO05D003818 2.6e-27 127.1 278 38.1
Sabra02G0195300 Salix brachista HOM05D007706 ORTHO05D009593 3.4e-27 126.7 291 40.2
EL10Ac7g17683 Beta vulgaris HOM05D007706 ORTHO05D009593 4.5e-27 126.3 276 36.2
VMungo1383G0992 Vigna mungo HOM05D007706 ORTHO05D009593 5.8e-27 125.9 281 37.7
Dinv16399 Davidia involucrata HOM05D007706 ORTHO05D009593 1.3e-26 124.8 298 37.2
Ca_08742_v3 Cicer arietinum L. HOM05D007706 ORTHO05D009593 2.2e-26 124.0 270 38.5
Glyma.19G168300 Glycine max HOM05D007706 ORTHO05D009593 2.9e-26 123.6 273 38.1
Lj2C1142T11 Lonicera japonica HOM05D007706 ORTHO05D009593 2.9e-26 123.6 288 37.5
Phvul.001G164700 Phaseolus vulgaris HOM05D007706 ORTHO05D009593 6.5e-26 122.5 279 39.1
Thecc.01G250700 Theobroma cacao HOM05D007706 ORTHO05D009593 8.4e-26 122.1 303 34.0
Hma1.2p1_1930F.1_g307940 Hydrangea macrophylla HOM05D007706 ORTHO05D009593 1.4e-25 121.3 292 37.0
Duzib138G1124 Durio zibethinus HOM05D007706 ORTHO05D009593 9.3e-25 118.6 296 36.1
Medtr7g098450 Medicago truncatula HOM05D007706 ORTHO05D009593 9.3e-25 118.6 269 38.3
Ah.15g092610 Amaranthus hybridus HOM05D007706 ORTHO05D009593 1.2e-24 118.2 276 36.2
TPR.G20053 Trifolium pratense HOM05D007706 ORTHO05D009593 1.2e-24 118.2 279 36.9
Dinv34676 Davidia involucrata HOM05D007706 ORTHO05D009593 3.5e-24 116.7 293 36.9
vmacro02710 Vaccinium macrocarpon HOM05D007706 ORTHO05D009593 3.5e-24 116.7 291 38.8
arahy.Tifrunner.gnm1.ann1.NJ5037 Arachis hypogaea HOM05D007706 ORTHO05D009593 4.6e-24 116.3 284 38.7
QL09p041349 Quercus lobata HOM05D007706 ORTHO05D009593 4.6e-24 116.3 282 37.2
CSS0048547 Camellia sinensis var. sinensis HOM05D007706 ORTHO05D009593 6.0e-24 115.9 301 35.9
FAN27G2030 Fragaria x ananassa HOM05D007706 ORTHO05D009593 1.3e-23 114.8 275 37.1
TAR362G1069 Trochodendron aralioides HOM05D007706 ORTHO05D009593 1.8e-23 114.4 301 34.2
Lalb_Chr20g0113631 Lupinus albus HOM05D007706 ORTHO05D009593 3.9e-23 113.2 284 35.6
Potri.002G256900 Populus trichocarpa HOM05D007706 ORTHO05D009593 3.9e-23 113.2 290 37.9
arahy.Tifrunner.gnm1.ann1.S77KHM Arachis hypogaea HOM05D007706 ORTHO05D009593 8.7e-23 112.1 282 38.7
PGR031G0475 Punica granatum HOM05D007706 ORTHO05D009593 8.7e-23 112.1 276 36.6
Cfa002482 Carpinus fangiana HOM05D007706 ORTHO05D009593 1.1e-22 111.7 285 34.4
Glyma.03G167200 Glycine max HOM05D007706 ORTHO05D009593 1.9e-22 110.9 277 37.2
ECA236G0985 Erigeron canadensis HOM05D007706 ORTHO05D009593 2.5e-22 110.5 276 38.4
Psat3g051920 Pisum sativum HOM05D007706 ORTHO05D009593 2.5e-22 110.5 275 36.7
CiPaw.04G190500 Carya illinoinensis HOM05D007706 ORTHO05D009593 3.3e-22 110.2 278 36.7
Medtr7g099260 Medicago truncatula HOM05D007706 ORTHO05D009593 4.3e-22 109.8 280 33.9
Ca_08762_v3 Cicer arietinum L. HOM05D003225 ORTHO05D009593 2.2e-21 107.5 210 41.0
Ca_30216_v3 Cicer arietinum L. HOM05D003225 ORTHO05D003818 2.2e-21 107.5 210 41.0
MD05G1189100 Malus domestica HOM05D007706 ORTHO05D009593 4.8e-21 106.3 292 36.0
Nn1g02965 Nelumbo nucifera HOM05D007706 ORTHO05D009593 4.8e-21 106.3 304 35.5
TWI12G0795 Tripterygium wilfordii HOM05D007706 ORTHO05D009593 6.3e-21 105.9 275 35.6
Haze_24704 Corylus avellana HOM05D007706 ORTHO05D009593 8.2e-21 105.5 289 34.3
Manes.12G037850 Manihot esculenta HOM05D007706 ORTHO05D009593 8.2e-21 105.5 289 36.3
Gohir.A07G204400 Gossypium hirsutum HOM05D007706 ORTHO05D009593 1.1e-20 105.1 298 33.2
Lsat_1_v5_gn_8_92000 Lactuca sativa HOM05D007706 ORTHO05D009593 1.8e-20 104.4 268 36.9
PSO675G7213 Papaver somniferum HOM05D007706 ORTHO05D009593 2.4e-20 104.0 271 35.8
PSO541G4538 Papaver somniferum HOM05D007706 ORTHO05D009593 4.1e-20 103.2 297 33.7
RcHm_v2.0_Chr6g0286691 Rosa chinensis HOM05D007706 ORTHO05D009593 4.1e-20 103.2 279 34.1
Psat3g053960 Pisum sativum HOM05D007706 ORTHO05D009593 6.9e-20 102.4 276 37.3
Gohir.D07G210400 Gossypium hirsutum HOM05D007706 ORTHO05D009593 2.0e-19 100.9 302 32.5
Sopen12g010960 Solanum pennellii HOM05D000004 ORTHO05D009593 3.4e-19 100.1 173 41.0
HanXRQChr04g0108691 Helianthus annuus HOM05D007706 ORTHO05D009593 5.9e-19 99.4 280 34.6
Duzib133G1528 Durio zibethinus HOM05D007706 ORTHO05D009593 7.7e-19 99.0 298 33.6
FAN15G0362 Fragaria x ananassa HOM05D007706 ORTHO05D009593 7.7e-19 99.0 279 35.5
GSVIVG01027919001 Vitis vinifera HOM05D006910 ORTHO05D008937 7.7e-19 99.0 278 34.2
AUR62008796 Chenopodium quinoa HOM05D007706 ORTHO05D009593 1.0e-18 98.6 276 35.1
Gorai.001G237800 Gossypium raimondii HOM05D007706 ORTHO05D009593 1.0e-18 98.6 300 32.7
MBI07_g23229_MAGBIO Magnolia biondii HOM05D007706 ORTHO05D009593 5.0e-18 96.3 282 35.8
FvH4_2g20530 Fragaria vesca HOM05D007706 ORTHO05D009593 6.5e-18 95.9 279 34.4
FAN24G1454 Fragaria x ananassa HOM05D007706 ORTHO05D009593 6.5e-18 95.9 279 34.4
Prupe.8G215700 Prunus persica HOM05D007706 ORTHO05D009593 1.9e-17 94.4 291 36.1
Eucgr.A01320 Eucalyptus grandis HOM05D007706 ORTHO05D009593 1.2e-16 91.7 302 32.5
Ciclev10020687m.g Citrus clementina HOM05D007706 ORTHO05D009593 2.1e-16 90.9 289 35.3
Nitab4.5_0000845g0230 Nicotiana tabacum HOM05D007706 ORTHO05D009593 2.1e-16 90.9 82 61.0
PSO782G3886 Papaver somniferum HOM05D006910 ORTHO05D009593 1.8e-15 87.8 282 34.8
Prupe.1G049000 Prunus persica HOM05D006910 ORTHO05D008937 8.8e-15 85.5 269 34.2
SalBow7G0697 Salvia bowleyana HOM05D007706 ORTHO05D009593 8.8e-15 85.5 260 33.8
Haze_11463 Corylus avellana HOM05D006910 ORTHO05D008937 1.1e-14 85.1 278 35.6
Cpa.g.sc87.26 Carica papaya HOM05D007706 ORTHO05D009593 3.3e-14 83.6 294 31.0
Oeu026810.1 Olea europaea HOM05D007706 ORTHO05D009593 1.3e-13 81.6 85 55.3
CsaV3_6G007370 Cucumis sativus L. HOM05D007706 ORTHO05D009593 1.4e-12 78.2 278 31.7
PSO675G2181 Papaver somniferum HOM05D007706 ORTHO05D009593 1.4e-12 78.2 229 33.2
Manes.03G158500 Manihot esculenta HOM05D006910 ORTHO05D008937 1.8e-12 77.8 274 31.0
AUR62025443 Chenopodium quinoa HOM05D006910 ORTHO05D008937 4.1e-12 76.6 78 53.8
CANSAT01G1705 Cannabis sativa HOM05D007706 ORTHO05D009593 1.2e-11 75.1 279 29.0
CiPaw.03G270700 Carya illinoinensis HOM05D007706 ORTHO05D009593 3.4e-11 73.6 286 32.5
ATR0787G077 Amborella trichopoda HOM05D007706 ORTHO05D009593 4.5e-11 73.2 291 32.6
MSTRG.21461 Avicennia marina HOM05D007706 ORTHO05D009593 4.5e-11 73.2 77 54.5
Dinv29800 Davidia involucrata HOM05D006910 ORTHO05D008937 7.7e-11 72.4 320 30.9
Sabra08G0131500 Salix brachista HOM05D006910 ORTHO05D008937 1.0e-10 72.0 284 28.5
HPP92_022478 Vanilla planifolia HOM05D007706 ORTHO05D009593 1.0e-10 72.0 268 31.3
Atru.chr4.1910 Acer truncatum HOM05D006910 ORTHO05D008937 1.3e-10 71.6 279 31.5
SEGI_40436 Sequoiadendron giganteum HOM05D052464 ORTHO05D009593 1.3e-10 71.6 291 29.9
MBI10_g26041_MAGBIO Magnolia biondii HOM05D007706 ORTHO05D009593 1.7e-10 71.2 266 32.0
Duzib151G0386 Durio zibethinus HOM05D006910 ORTHO05D008937 2.2e-10 70.9 275 30.5
MELO3C022390.2 Cucumis melo HOM05D007706 ORTHO05D009593 2.5e-09 67.4 280 29.6
CDE05G1228 Ceratophyllum demersum HOM05D007706 ORTHO05D009593 3.2e-09 67.0 202 35.6
CSS0027831 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 4.2e-09 66.6 272 29.8
Gohir.D10G160000 Gossypium hirsutum HOM05D006910 ORTHO05D008937 4.2e-09 66.6 273 31.5
Actinidia37550 Actinidia chinensis HOM05D006910 ORTHO05D008937 1.2e-08 65.1 107 41.1
CSS0004989 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 2.7e-08 63.9 275 28.7
ClCG06G001430 Citrullus lanatus HOM05D007706 ORTHO05D009593 2.7e-08 63.9 284 28.9
Gorai.011G179800 Gossypium raimondii HOM05D006910 ORTHO05D008937 2.7e-08 63.9 295 29.8
PSO478G1200 Papaver somniferum HOM05D006910 ORTHO05D009593 2.7e-08 63.9 210 32.9
TAR622G1049 Trochodendron aralioides HOM05D027966 ORTHO05D025782 2.7e-08 63.9 267 29.2
CSS0021483 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 3.6e-08 63.5 272 30.9
Gohir.A10G107300 Gossypium hirsutum HOM05D006910 ORTHO05D008937 6.1e-08 62.8 297 31.0
Actinidia30127 Actinidia chinensis HOM05D007706 ORTHO05D009593 1.0e-07 62.0 72 52.8
Os03g0140700 Oryza sativa ssp. japonica HOM05D007706 ORTHO05D009593 8.8e-07 58.9 275 29.5
vmacro15481 Vaccinium macrocarpon HOM05D006910 ORTHO05D008937 1.1e-06 58.5 118 39.0
COL.COLO4_10568 Corchorus olitorius HOM05D007706 ORTHO05D009593 2.6e-06 57.4 33 72.7
Sabra10G0041700 Salix brachista HOM05D006910 ORTHO05D008937 5.7e-06 56.2 67 47.8
Cc03_g06380 Coffea canephora HOM05D006910 ORTHO05D008937 7.4e-06 55.8 77 40.3
Mapoly0029s0147 Marchantia polymorpha HOM05D036240 ORTHO05D031199 7.4e-06 55.8 151 31.8


User provided reference genes

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