Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G1795 Salvia bowleyana HOM05D001420 ORTHO05D009292 4.8e-89 331.3 181 100.0
SalBow4G0299 Salvia bowleyana HOM05D001420 ORTHO05D009292 3.6e-84 315.1 212 85.4
SGA_v2.0_scaffold44G16915 Striga asiatica HOM05D001420 ORTHO05D009292 2.0e-71 272.7 181 75.7
Migut.F00060 Erythranthe guttata HOM05D001420 ORTHO05D009292 7.7e-71 270.8 181 75.1
MSTRG.3074 Avicennia marina HOM05D001420 ORTHO05D009292 1.9e-69 266.2 179 76.5
Oeu035224.1 Olea europaea HOM05D001420 ORTHO05D009292 1.7e-65 253.1 179 72.6
Dinv25658 Davidia involucrata HOM05D001420 ORTHO05D002488 3.7e-65 251.9 178 71.3
Cc07_g00860 Coffea canephora HOM05D001420 ORTHO05D009292 3.1e-64 248.8 171 74.3
CSS0004965 Camellia sinensis var. sinensis HOM05D001420 ORTHO05D009292 4.1e-64 248.4 177 71.8
vmacro18348 Vaccinium macrocarpon HOM05D001420 ORTHO05D009292 5.3e-64 248.1 178 70.2
Nitab4.5_0005161g0070 Nicotiana tabacum HOM05D001420 ORTHO05D009292 7.0e-64 247.7 174 69.5
Nitab4.5_0000559g0390 Nicotiana tabacum HOM05D001420 ORTHO05D009292 1.7e-62 243.0 181 67.4
GSVIVG01033089001 Vitis vinifera HOM05D001420 ORTHO05D009292 5.0e-62 241.5 176 67.6
CSS0009369 Camellia sinensis var. sinensis HOM05D001420 ORTHO05D009292 1.1e-61 240.4 191 66.5
Potri.001G329600 Populus trichocarpa HOM05D001420 ORTHO05D009292 2.5e-61 239.2 177 67.2
Hma1.2p1_1278F.1_g272270 Hydrangea macrophylla HOM05D001420 ORTHO05D009292 4.2e-61 238.4 177 65.5
Thecc.04G036700 Theobroma cacao HOM05D001420 ORTHO05D009292 4.7e-60 235.0 178 65.2
TPR.G38286 Trifolium pratense HOM05D001420 ORTHO05D009292 4.7e-60 235.0 176 64.2
MD09G1010400 Malus domestica HOM05D001420 ORTHO05D009292 1.4e-59 233.4 172 67.4
PGR142G3591 Punica granatum HOM05D001420 ORTHO05D009292 1.4e-59 233.4 178 64.6
Duzib147G1300 Durio zibethinus HOM05D001420 ORTHO05D009292 1.8e-59 233.0 178 64.0
unitig_60.g25408 Utricularia gibba HOM05D001420 ORTHO05D009292 4.0e-59 231.9 180 66.7
Gorai.006G042300 Gossypium raimondii HOM05D001420 ORTHO05D009292 8.8e-59 230.7 178 64.0
Actinidia04437 Actinidia chinensis HOM05D001420 ORTHO05D009292 2.6e-58 229.2 173 67.6
CANSAT64G1297 Cannabis sativa HOM05D001420 ORTHO05D009292 3.3e-58 228.8 172 65.7
Haze_14879 Corylus avellana HOM05D001420 ORTHO05D009292 7.5e-58 227.6 178 64.0
Medtr7g029105 Medicago truncatula HOM05D001420 ORTHO05D009292 7.5e-58 227.6 178 62.9
PGSC0003DMG400022915 Solanum tuberosum HOM05D001420 ORTHO05D009292 7.5e-58 227.6 172 63.4
Lj1g0001542 Lotus japonicus HOM05D001420 ORTHO05D009292 1.3e-57 226.9 178 62.9
RcHm_v2.0_Chr2g0175601 Rosa chinensis HOM05D001420 ORTHO05D009292 1.3e-57 226.9 179 63.1
Gohir.A09G036000 Gossypium hirsutum HOM05D001420 ORTHO05D009292 1.7e-57 226.5 178 62.4
Cpa.g.sc171.11 Carica papaya HOM05D001420 ORTHO05D009292 4.8e-57 224.9 177 62.7
FvH4_6g53561 Fragaria vesca HOM05D001420 ORTHO05D009292 6.3e-57 224.6 179 63.7
Prupe.3G306700 Prunus persica HOM05D001420 ORTHO05D009292 1.1e-56 223.8 179 63.7
arahy.Tifrunner.gnm1.ann1.WDB61R Arachis hypogaea HOM05D001420 ORTHO05D009292 3.1e-56 222.2 179 61.5
Psat3g174720 Pisum sativum HOM05D001420 ORTHO05D002488 4.1e-56 221.9 175 61.1
TWI60G0015 Tripterygium wilfordii HOM05D001420 ORTHO05D009292 4.1e-56 221.9 178 63.5
Glyma.19G091500 Glycine max HOM05D001420 ORTHO05D009292 5.3e-56 221.5 176 62.5
FAN09G1657 Fragaria x ananassa HOM05D001420 ORTHO05D009292 7.0e-56 221.1 179 62.0
MBI11_g44423_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 1.2e-55 220.3 176 61.9
TAR622G0082 Trochodendron aralioides HOM05D001420 ORTHO05D009292 1.2e-55 220.3 172 64.0
Eucgr.I01645 Eucalyptus grandis HOM05D001420 ORTHO05D009292 1.6e-55 219.9 175 62.9
QL02p071311 Quercus lobata HOM05D001420 ORTHO05D009292 1.6e-55 219.9 178 62.9
Rhsim08G0042700 Rhododendron simsii HOM05D001420 ORTHO05D009292 2.7e-55 219.2 176 65.3
AL5G16160 Arabidopsis lyrata HOM05D001420 ORTHO05D009292 3.5e-55 218.8 177 60.5
VMungo1383G3091 Vigna mungo HOM05D001420 ORTHO05D009292 4.5e-55 218.4 175 61.7
AUR62017830 Chenopodium quinoa HOM05D001420 ORTHO05D009292 1.3e-54 216.9 176 61.4
Manes.15G161200 Manihot esculenta HOM05D001420 ORTHO05D009292 1.7e-54 216.5 174 64.9
THA.LOC104825624 Tarenaya hassleriana HOM05D001420 ORTHO05D009292 1.7e-54 216.5 176 61.4
AT3G27050 Arabidopsis thaliana HOM05D001420 ORTHO05D009292 2.2e-54 216.1 175 60.6
FAN05G4256 Fragaria x ananassa HOM05D001420 ORTHO05D009292 2.2e-54 216.1 191 58.6
BcaB04g19424 Brassica carinata HOM05D001420 ORTHO05D009292 3.8e-54 215.3 175 60.6
AUR62003518 Chenopodium quinoa HOM05D001420 ORTHO05D009292 1.1e-53 213.8 173 61.8
Nn3g16459 Nelumbo nucifera HOM05D001420 ORTHO05D009292 1.1e-53 213.8 175 60.0
Glyma.16G056200 Glycine max HOM05D001420 ORTHO05D009292 1.5e-53 213.4 176 59.7
FAN14G1551 Fragaria x ananassa HOM05D001420 ORTHO05D000136 5.5e-53 211.5 171 63.2
Sc15g0002740 Simmondsia chinensis HOM05D001420 ORTHO05D009292 5.5e-53 211.5 176 60.2
Thhalv10004992m.g Eutrema salsugineum HOM05D001420 ORTHO05D009292 1.2e-52 210.3 175 58.9
BcaC04g23914 Brassica carinata HOM05D001420 ORTHO05D009292 3.6e-52 208.8 175 59.4
Aqoxy3G01555 Aquilegia oxysepala HOM05D001420 ORTHO05D009292 1.0e-51 207.2 172 59.9
Sp2g16180 Schrenkiella parvula HOM05D001420 ORTHO05D009292 2.3e-51 206.1 175 58.3
Carub.0005s0529 Capsella rubella HOM05D001420 ORTHO05D009292 3.0e-51 205.7 175 57.7
Lalb_Chr22g0360361 Lupinus albus HOM05D001420 ORTHO05D009292 3.0e-51 205.7 172 60.5
A09p03260 Brassica napus HOM05D001420 ORTHO05D009292 5.2e-51 204.9 176 59.1
BraA09t35964Z Brassica rapa HOM05D001420 ORTHO05D009292 5.2e-51 204.9 176 59.1
C09p03460 Brassica napus HOM05D001420 ORTHO05D009292 8.8e-51 204.1 176 59.1
BolC9t53267H Brassica oleracea HOM05D001420 ORTHO05D009292 8.8e-51 204.1 176 59.1
HanXRQChr17g0550091 Helianthus annuus HOM05D001420 ORTHO05D009292 1.2e-50 203.8 165 64.2
Aa31LG2G5540 Aethionema arabicum HOM05D001420 ORTHO05D009292 2.0e-50 203.0 176 57.4
ATR0561G272 Amborella trichopoda HOM05D001420 ORTHO05D009292 4.4e-50 201.8 170 58.2
HPP92_009721 Vanilla planifolia HOM05D001420 ORTHO05D009292 5.7e-50 201.4 173 59.5
PSO478G4377 Papaver somniferum HOM05D001420 ORTHO05D009292 7.5e-50 201.1 170 57.6
Lsat_1_v5_gn_0_26060 Lactuca sativa HOM05D001420 ORTHO05D009292 1.7e-49 199.9 166 59.6
CARHR148270 Cardamine hirsuta HOM05D001420 ORTHO05D009292 2.2e-49 199.5 175 56.0
ECA246G1005 Erigeron canadensis HOM05D001420 ORTHO05D002488 2.4e-48 196.1 166 59.0
Phvul.001G093200 Phaseolus vulgaris HOM05D001420 ORTHO05D009292 2.7e-47 192.6 176 54.5
Peaxi162Scf00700g00030 Petunia axillaris HOM05D001420 ORTHO05D009292 3.5e-47 192.2 138 65.2
PSO017G5378 Papaver somniferum HOM05D001420 ORTHO05D009292 5.9e-47 191.4 175 55.4
Sabra16G0211000 Salix brachista HOM05D001420 ORTHO05D009292 7.7e-47 191.0 252 46.0
CDE05G2056 Ceratophyllum demersum HOM05D001420 ORTHO05D009292 1.0e-46 190.7 172 55.2
ClCG05G013550 Citrullus lanatus HOM05D001420 ORTHO05D009292 5.0e-46 188.3 166 60.2
Atru.chr6.2574 Acer truncatum HOM05D001420 ORTHO05D009292 1.1e-45 187.2 147 62.6
Cfa007225 Carpinus fangiana HOM05D001420 ORTHO05D009292 1.9e-45 186.4 164 61.0
CsaV3_3G026980 Cucumis sativus L. HOM05D001420 ORTHO05D009292 2.5e-45 186.0 167 59.9
SEGI_21368 Sequoiadendron giganteum HOM05D001420 ORTHO05D009292 2.5e-45 186.0 171 52.6
Dinv33335 Davidia involucrata HOM05D001420 ORTHO05D009292 6.1e-44 181.4 118 73.7
Gohir.D09G037000 Gossypium hirsutum HOM05D001420 ORTHO05D009292 6.1e-44 181.4 142 63.4
Haze_14955 Corylus avellana HOM05D001420 ORTHO05D009292 1.0e-43 180.6 142 64.1
Sed0020252 Sechium edule HOM05D001420 ORTHO05D009292 5.2e-43 178.3 168 56.5
MBI11_g05328_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 7.5e-42 174.5 149 59.1
Ciclev10017089m.g Citrus clementina HOM05D001420 ORTHO05D009292 1.3e-41 173.7 137 63.5
Os11g0488600 Oryza sativa ssp. japonica HOM05D001420 ORTHO05D009292 4.1e-40 168.7 177 51.4
Lj7C610G7 Lonicera japonica HOM05D001420 ORTHO05D009292 3.9e-38 162.2 118 66.1
Pp3c14_4200 Physcomitrium patens HOM05D001420 ORTHO05D009292 3.9e-38 162.2 171 46.2
Pp3c1_27230 Physcomitrium patens HOM05D001420 ORTHO05D009292 3.9e-38 162.2 174 46.0
Zm00001eb112760 Zea mays HOM05D001420 ORTHO05D009292 1.1e-37 160.6 195 45.6
MELO3C014890.2 Cucumis melo HOM05D001420 ORTHO05D009292 5.6e-37 158.3 138 60.9
RcHm_v2.0_Chr2g0175681 Rosa chinensis HOM05D001420 ORTHO05D009292 3.6e-36 155.6 138 58.0
AagrBONN_evm.TU.Sc2ySwM_228.3079 Anthoceros agrestis HOM05D001420 ORTHO05D009292 4.7e-36 155.2 170 42.4
Ah.03g147520 Amaranthus hybridus HOM05D001420 ORTHO05D009292 4.0e-35 152.1 140 60.7
MD16G1254400 Malus domestica HOM05D001420 ORTHO05D009292 5.4e-32 141.7 122 59.8
SMO119G0238 Selaginella moellendorffii HOM05D001420 ORTHO05D009292 1.6e-31 140.2 140 50.0
CBR_g762 Chara braunii HOM05D001420 ORTHO05D009292 1.1e-29 134.0 163 41.1
CDE05G0537 Ceratophyllum demersum HOM05D001420 ORTHO05D009292 3.6e-28 129.0 115 57.4
DCAR_021795 Daucus carota HOM05D001420 ORTHO05D009292 2.5e-21 106.3 87 59.8
CiPaw.03G055800 Carya illinoinensis HOM05D001420 ORTHO05D002488 3.7e-17 92.4 60 78.3
Cre01.g049050 Chlamydomonas reinhardtii HOM05D001420 ORTHO05D009292 1.9e-13 80.1 148 32.4
Hund12739 Selenicereus undatus HOM05D001420 ORTHO05D009292 2.1e-12 76.6 56 71.4
Nitab4.5_0000525g0030 Nicotiana tabacum HOM05D001420 ORTHO05D009292 1.3e-09 67.4 43 65.1
FAN02G0503 Fragaria x ananassa HOM05D001420 ORTHO05D009292 3.8e-09 65.9 70 50.0


User provided reference genes

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