Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G1606 Salvia bowleyana HOM05D006582 ORTHO05D008313 2.1e-158 562.4 293 100.0
SGA_v2.0_scaffold18G08434 Striga asiatica HOM05D006582 ORTHO05D008313 2.4e-138 495.7 295 86.1
Migut.F00182 Erythranthe guttata HOM05D006582 ORTHO05D008313 5.3e-138 494.6 295 84.7
CSS0043436 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 4.6e-134 481.5 295 82.0
CSS0003388 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 1.4e-133 479.9 295 81.7
Dinv29249 Davidia involucrata HOM05D006582 ORTHO05D008313 2.5e-132 475.7 295 82.0
Actinidia34241 Actinidia chinensis HOM05D006582 ORTHO05D008313 7.4e-132 474.2 295 81.0
unitig_747.g21740 Utricularia gibba HOM05D006582 ORTHO05D008313 1.4e-130 469.9 293 79.9
Rhsim03G0211600 Rhododendron simsii HOM05D006582 ORTHO05D008313 3.1e-130 468.8 295 79.7
Hma1.2p1_0415F.1_g148010 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 5.3e-130 468.0 295 80.0
Sopen03g022560 Solanum pennellii HOM05D006582 ORTHO05D008313 3.4e-129 465.3 295 79.3
GSVIVG01038593001 Vitis vinifera HOM05D006582 ORTHO05D008313 5.9e-129 464.5 299 79.3
PGSC0003DMG402018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 3.8e-128 461.8 295 79.3
Lsat_1_v5_gn_2_135281 Lactuca sativa HOM05D006582 ORTHO05D008313 1.4e-127 459.9 300 78.0
Solyc03g082820.3 Solanum lycopersicum HOM05D006582 ORTHO05D008313 1.4e-127 459.9 295 78.3
Peaxi162Scf00740g00331 Petunia axillaris HOM05D006582 ORTHO05D008313 3.2e-127 458.8 295 79.0
Lj3A900T44 Lonicera japonica HOM05D006582 ORTHO05D008313 5.5e-127 458.0 297 77.4
Cc04_g16300 Coffea canephora HOM05D006582 ORTHO05D008313 2.6e-124 449.1 295 78.0
CAN.G481.47 Capsicum annuum HOM05D006582 ORTHO05D008313 3.3e-124 448.7 297 77.1
Cfa016201 Carpinus fangiana HOM05D006582 ORTHO05D008313 5.7e-124 448.0 303 76.2
TAR374G0762 Trochodendron aralioides HOM05D006582 ORTHO05D008313 3.7e-123 445.3 298 75.5
PGR142G1628 Punica granatum HOM05D006582 ORTHO05D008313 1.1e-122 443.7 303 75.2
CiPaw.06G044200 Carya illinoinensis HOM05D006582 ORTHO05D008313 3.1e-122 442.2 302 74.8
RcHm_v2.0_Chr1g0355871 Rosa chinensis HOM05D006582 ORTHO05D008313 3.1e-122 442.2 300 75.7
FAN01G0099 Fragaria x ananassa HOM05D006582 ORTHO05D008313 7.0e-122 441.0 300 75.7
HanXRQChr07g0206401 Helianthus annuus HOM05D006582 ORTHO05D008313 9.1e-122 440.7 292 77.1
Sed0002968 Sechium edule HOM05D006582 ORTHO05D008313 9.1e-122 440.7 306 74.2
vmacro06405 Vaccinium macrocarpon HOM05D006582 ORTHO05D008313 1.5e-121 439.9 341 67.7
CsaV3_5G000310 Cucumis sativus L. HOM05D006582 ORTHO05D008313 2.0e-121 439.5 305 73.4
FAN06G3963 Fragaria x ananassa HOM05D006582 ORTHO05D008313 4.5e-121 438.3 300 75.0
Thecc.03G203200 Theobroma cacao HOM05D006582 ORTHO05D008313 4.5e-121 438.3 312 74.0
MELO3C005901.2 Cucumis melo HOM05D006582 ORTHO05D008313 5.9e-121 438.0 305 73.8
FAN03G0584 Fragaria x ananassa HOM05D006582 ORTHO05D008313 7.7e-121 437.6 300 75.0
FvH4_7g14460 Fragaria vesca HOM05D006582 ORTHO05D008313 1.3e-120 436.8 300 74.7
FAN06G2233 Fragaria x ananassa HOM05D006582 ORTHO05D008313 1.3e-120 436.8 300 74.7
MD07G1135900 Malus domestica HOM05D006582 ORTHO05D008313 1.7e-120 436.4 300 74.0
Prupe.2G171600 Prunus persica HOM05D006582 ORTHO05D008313 1.7e-120 436.4 301 74.8
SGA_v2.0_scaffold44G16825 Striga asiatica HOM05D006582 ORTHO05D008313 8.5e-120 434.1 293 75.1
THA.LOC104811904 Tarenaya hassleriana HOM05D006582 ORTHO05D008313 3.2e-119 432.2 304 71.7
Duzib068G0295 Durio zibethinus HOM05D006582 ORTHO05D008313 1.6e-118 429.9 312 73.1
Ciclev10021376m.g Citrus clementina HOM05D006582 ORTHO05D008313 2.1e-118 429.5 300 73.0
Haze_00249 Corylus avellana HOM05D006582 ORTHO05D008313 2.1e-118 429.5 331 69.8
Haze_00255 Corylus avellana HOM05D006582 ORTHO05D008313 2.1e-118 429.5 331 69.8
Manes.01G148600 Manihot esculenta HOM05D006582 ORTHO05D008313 2.7e-118 429.1 301 73.8
Gorai.004G122700 Gossypium raimondii HOM05D006582 ORTHO05D008313 3.6e-118 428.7 274 79.2
Sabra15G0024300 Salix brachista HOM05D006582 ORTHO05D008313 3.6e-118 428.7 309 71.8
Gohir.D08G113800 Gossypium hirsutum HOM05D006582 ORTHO05D008313 8.0e-118 427.6 274 78.5
Phvul.011G018800 Phaseolus vulgaris HOM05D006582 ORTHO05D008313 1.0e-117 427.2 301 73.8
CANSAT21G1996 Cannabis sativa HOM05D006582 ORTHO05D008313 3.9e-117 425.2 302 73.8
Nn6g34389 Nelumbo nucifera HOM05D006582 ORTHO05D008313 5.2e-117 424.9 299 72.6
QL09p007748 Quercus lobata HOM05D006582 ORTHO05D008313 5.2e-117 424.9 308 71.1
TWI60G0746 Tripterygium wilfordii HOM05D006582 ORTHO05D008313 1.1e-116 423.7 314 71.3
VMungo1127G0470 Vigna mungo HOM05D006582 ORTHO05D008313 1.1e-116 423.7 300 73.3
Ah.07g205040 Amaranthus hybridus HOM05D006582 ORTHO05D008313 1.5e-116 423.3 271 76.4
DCAR_008960 Daucus carota HOM05D006582 ORTHO05D008313 2.6e-116 422.5 283 77.0
arahy.Tifrunner.gnm1.ann1.AV4C6H Arachis hypogaea HOM05D006582 ORTHO05D008313 7.4e-116 421.0 302 72.5
arahy.Tifrunner.gnm1.ann1.D33ADG Arachis hypogaea HOM05D006582 ORTHO05D008313 7.4e-116 421.0 302 72.5
Aqoxy7G00041 Aquilegia oxysepala HOM05D006582 ORTHO05D008313 9.7e-116 420.6 296 72.3
COL.COLO4_16812 Corchorus olitorius HOM05D006582 ORTHO05D008313 1.7e-115 419.9 312 70.5
EL10Ac3g05224 Beta vulgaris HOM05D006582 ORTHO05D008313 2.8e-115 419.1 271 75.3
AUR62006048 Chenopodium quinoa HOM05D006582 ORTHO05D008313 3.7e-115 418.7 269 75.5
AUR62035580 Chenopodium quinoa HOM05D006582 ORTHO05D008313 1.1e-114 417.2 284 72.9
Glyma.11G108800 Glycine max HOM05D006582 ORTHO05D008313 1.8e-114 416.4 310 71.9
Lj3g0025694 Lotus japonicus HOM05D006582 ORTHO05D008313 2.4e-114 416.0 299 73.2
Glyma.12G016600 Glycine max HOM05D006582 ORTHO05D008313 9.1e-114 414.1 302 72.8
Sc19g0000750 Simmondsia chinensis HOM05D006582 ORTHO05D008313 1.2e-113 413.7 305 68.9
Aa31LG3G9690 Aethionema arabicum HOM05D006582 ORTHO05D008313 1.6e-113 413.3 306 68.3
Sp7g25720 Schrenkiella parvula HOM05D006582 ORTHO05D008313 1.6e-113 413.3 306 68.6
Hund11634 Selenicereus undatus HOM05D006582 ORTHO05D008313 2.6e-113 412.5 271 74.2
Thhalv10025816m.g Eutrema salsugineum HOM05D006582 ORTHO05D008313 3.5e-113 412.1 306 68.3
AT4G27750 Arabidopsis thaliana HOM05D006582 ORTHO05D008313 5.9e-113 411.4 306 68.0
BcaC09g50542 Brassica carinata HOM05D006582 ORTHO05D008313 1.3e-112 410.2 306 68.3
Carub.0007s1306 Capsella rubella HOM05D006582 ORTHO05D008313 1.7e-112 409.8 306 68.0
CARHR235480 Cardamine hirsuta HOM05D006582 ORTHO05D008313 1.7e-112 409.8 306 68.6
BcaNung01623 Brassica carinata HOM05D006582 ORTHO05D008313 2.2e-112 409.5 306 68.3
C01p24110 Brassica napus HOM05D006582 ORTHO05D008313 2.9e-112 409.1 306 68.3
A01p19210 Brassica napus HOM05D006582 ORTHO05D008313 3.8e-112 408.7 306 68.3
BraA01t01863Z Brassica rapa HOM05D006582 ORTHO05D008313 3.8e-112 408.7 306 68.3
PSO782G4269 Papaver somniferum HOM05D006582 ORTHO05D008313 5.0e-112 408.3 296 69.9
Ca_18952_v3 Cicer arietinum L. HOM05D006582 ORTHO05D008313 1.9e-111 406.4 305 69.5
TPR.G19615 Trifolium pratense HOM05D006582 ORTHO05D008313 1.9e-111 406.4 305 68.5
Medtr4g078140 Medicago truncatula HOM05D006582 ORTHO05D008313 5.5e-111 404.8 307 68.7
Psat7g170040 Pisum sativum HOM05D006582 ORTHO05D008313 7.2e-111 404.4 305 69.2
AL7G24900 Arabidopsis lyrata HOM05D006582 ORTHO05D008313 9.4e-111 404.1 308 66.9
Lalb_Chr03g0024361 Lupinus albus HOM05D006582 ORTHO05D008313 1.6e-110 403.3 303 69.6
BolC1t02368H Brassica oleracea HOM05D006582 ORTHO05D008313 2.6e-108 396.0 335 62.7
Nitab4.5_0002780g0150 Nicotiana tabacum HOM05D006582 ORTHO05D008313 1.7e-107 393.3 314 67.2
ECA238G3804 Erigeron canadensis HOM05D006582 ORTHO05D008313 1.4e-106 390.2 324 65.4
Hund21029 Selenicereus undatus HOM05D006582 ORTHO05D008313 9.1e-106 387.5 284 68.3
Nitab4.5_0007755g0010 Nicotiana tabacum HOM05D006582 ORTHO05D008313 1.7e-104 383.3 336 62.8
MD01G1064000 Malus domestica HOM05D006582 ORTHO05D008313 2.2e-104 382.9 319 65.5
BcaNung01628 Brassica carinata HOM05D006582 ORTHO05D008313 5.7e-100 368.2 306 63.7
MBI04_g35986_MAGBIO Magnolia biondii HOM05D006582 ORTHO05D008313 4.8e-99 365.2 297 66.3
BcaNung01632 Brassica carinata HOM05D006582 ORTHO05D008313 2.1e-94 349.7 320 60.0
Hma1.2p1_0415F.1_g148020 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 2.8e-91 339.3 220 77.7
Os06g0129300 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 2.8e-91 339.3 272 65.1
ATR0933G001 Amborella trichopoda HOM05D006582 ORTHO05D008313 1.1e-90 337.4 308 59.4
Zm00001eb378450 Zea mays HOM05D006582 ORTHO05D008313 8.6e-88 327.8 272 62.9
Eucgr.K00407 Eucalyptus grandis HOM05D006582 ORTHO05D008313 9.8e-84 314.3 233 71.7
Gohir.A08G102500 Gossypium hirsutum HOM05D006582 ORTHO05D008313 5.0e-80 302.0 209 74.2
HPP92_007389 Vanilla planifolia HOM05D006582 ORTHO05D008313 5.0e-80 302.0 278 59.0
MD01G1064500 Malus domestica HOM05D006582 ORTHO05D008313 5.6e-79 298.5 201 75.1
MD01G1063600 Malus domestica HOM05D006582 ORTHO05D008313 1.1e-71 274.2 254 59.4
CDE04G1908 Ceratophyllum demersum HOM05D006582 ORTHO05D008313 5.6e-71 271.9 294 51.4
Potri.015G029300 Populus trichocarpa HOM05D006582 ORTHO05D008313 4.0e-69 265.8 209 68.4
Os10g0520900 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 5.2e-61 238.8 263 47.1
Cpa.g.sc3.116 Carica papaya HOM05D006582 ORTHO05D008313 1.1e-55 221.1 192 64.1
PGSC0003DMG401018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 2.4e-53 213.4 155 74.2
Zm00001eb021230 Zea mays HOM05D006582 ORTHO05D008313 6.9e-53 211.8 283 40.6
Mapoly0081s0017 Marchantia polymorpha HOM05D006582 ORTHO05D008313 2.4e-50 203.4 312 40.1
SMO356G0114 Selaginella moellendorffii HOM05D001613 ORTHO05D001556 1.3e-48 197.6 299 39.1
Pp3c14_24810 Physcomitrium patens HOM05D006582 ORTHO05D008313 2.2e-43 180.3 293 37.9
AagrBONN_evm.TU.Sc2ySwM_228.4673 Anthoceros agrestis HOM05D006582 ORTHO05D008313 5.1e-40 169.1 219 43.8
Hma1.2p1_0512F.1_g169380 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 6.9e-37 158.7 288 41.3
CiPaw.05G199600 Carya illinoinensis HOM05D006582 ORTHO05D008313 3.2e-34 149.8 115 65.2
CBR_g57838 Chara braunii HOM05D006582 ORTHO05D008313 6.9e-29 132.1 222 38.7
Hma1.2p1_0415F.1_g148000 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 1.9e-26 124.0 88 73.9
SHI19113 Sapria himalayana HOM05D006582 ORTHO05D008313 6.9e-21 105.5 74 68.9
SHI19111 Sapria himalayana HOM05D006582 ORTHO05D008313 6.5e-19 99.0 93 54.8
Rhsim03G0115100 Rhododendron simsii HOM05D006582 ORTHO05D023108 2.7e-17 93.6 134 45.5
SEGI_26283 Sequoiadendron giganteum HOM05D006582 ORTHO05D008313 4.6e-17 92.8 79 62.0
MD07G1135700 Malus domestica HOM05D006582 ORTHO05D008313 2.9e-11 73.6 79 58.2
SEGI_35321 Sequoiadendron giganteum HOM05D006582 ORTHO05D008313 1.5e-07 61.2 57 47.4


User provided reference genes

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