Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G1588 Salvia bowleyana HOM05D000031 ORTHO05D010178 5.4e-60 234.2 123 100.0
SalBow4G2349 Salvia bowleyana HOM05D000031 ORTHO05D000030 1.2e-56 223.0 123 95.1
SalBow4G2999 Salvia bowleyana HOM05D000031 ORTHO05D000030 2.8e-56 221.9 123 95.1
SalBow4G3188 Salvia bowleyana HOM05D000031 ORTHO05D010178 2.6e-46 188.7 104 95.2
SalBow7G3404 Salvia bowleyana HOM05D000031 ORTHO05D000030 4.8e-16 88.2 63 73.0
Oeu041188.1 Olea europaea HOM05D000031 ORTHO05D000030 2.6e-09 65.9 66 53.0
SalBow1G4078 Salvia bowleyana HOM05D000031 ORTHO05D010178 3.3e-09 65.5 74 47.3
Oeu041184.1 Olea europaea HOM05D000031 ORTHO05D000030 4.4e-09 65.1 60 55.0
SalBow7G0552 Salvia bowleyana HOM05D000031 ORTHO05D000030 1.3e-08 63.5 69 47.8
Oeu060495.1 Olea europaea HOM05D000031 ORTHO05D000030 2.2e-08 62.8 59 50.8
MSTRG.4744 Avicennia marina HOM05D000031 ORTHO05D000030 3.7e-08 62.0 70 48.6
Oeu041194.1 Olea europaea HOM05D000031 ORTHO05D000030 3.7e-08 62.0 63 46.0
CiPaw.15G025800 Carya illinoinensis HOM05D000031 ORTHO05D000030 4.8e-08 61.6 57 57.9
SalBow6G2686 Salvia bowleyana HOM05D000031 ORTHO05D000030 6.3e-08 61.2 64 48.4
Nn7g36326 Nelumbo nucifera HOM05D000031 ORTHO05D000030 8.2e-08 60.8 74 45.9
Oeu041179.1 Olea europaea HOM05D000031 ORTHO05D000030 8.2e-08 60.8 57 54.4
CiPaw.15G025200 Carya illinoinensis HOM05D000031 ORTHO05D000030 1.1e-07 60.5 57 57.9
CiPaw.15G026000 Carya illinoinensis HOM05D000031 ORTHO05D000030 1.1e-07 60.5 57 57.9
CiPaw.15G026600 Carya illinoinensis HOM05D000031 ORTHO05D000030 1.1e-07 60.5 57 57.9
Oeu060498.1 Olea europaea HOM05D000031 ORTHO05D000030 1.4e-07 60.1 59 49.2
Gorai.011G218100 Gossypium raimondii HOM05D000031 ORTHO05D000030 1.8e-07 59.7 55 54.5
Oeu061242.1 Olea europaea HOM05D000031 ORTHO05D000030 1.8e-07 59.7 59 50.8
SalBow7G0041 Salvia bowleyana HOM05D000031 ORTHO05D000030 1.8e-07 59.7 69 46.4
SalBow7G3911 Salvia bowleyana HOM05D000031 ORTHO05D000030 1.8e-07 59.7 75 46.7
TWI14G1119 Tripterygium wilfordii HOM05D000031 ORTHO05D000030 1.8e-07 59.7 71 42.3
MSTRG.9485 Avicennia marina HOM05D000031 ORTHO05D000030 2.4e-07 59.3 57 54.4
Ciclev10027068m.g Citrus clementina HOM05D000031 ORTHO05D000030 2.4e-07 59.3 77 41.6
Gorai.011G218000 Gossypium raimondii HOM05D000031 ORTHO05D000030 2.4e-07 59.3 55 50.9
Manes.01G013225 Manihot esculenta HOM05D000031 ORTHO05D000030 2.4e-07 59.3 80 45.0
Oeu060496.2 Olea europaea HOM05D000031 ORTHO05D000030 2.4e-07 59.3 59 50.8
Gohir.D10G195100 Gossypium hirsutum HOM05D000031 ORTHO05D000030 3.1e-07 58.9 55 50.9
Gohir.D10G195700 Gossypium hirsutum HOM05D000031 ORTHO05D000030 3.1e-07 58.9 55 52.7
Potri.003G186100 Populus trichocarpa HOM05D000031 ORTHO05D000030 3.1e-07 58.9 69 43.5
CiPaw.15G028100 Carya illinoinensis HOM05D000031 ORTHO05D000030 4.1e-07 58.5 57 54.4
Gohir.D10G195200 Gossypium hirsutum HOM05D000031 ORTHO05D000030 4.1e-07 58.5 55 52.7
Gorai.011G218500 Gossypium raimondii HOM05D000031 ORTHO05D000030 4.1e-07 58.5 55 52.7
Oeu060504.1 Olea europaea HOM05D000031 ORTHO05D000030 4.1e-07 58.5 57 50.9
Prupe.1G188700 Prunus persica HOM05D000031 ORTHO05D000030 4.1e-07 58.5 58 51.7
RcHm_v2.0_Chr5g0015591 Rosa chinensis HOM05D000031 ORTHO05D000030 4.1e-07 58.5 58 50.0
SalBow7G2215 Salvia bowleyana HOM05D000031 ORTHO05D000030 4.1e-07 58.5 75 45.3
FvH4_3g09860 Fragaria vesca HOM05D000031 ORTHO05D000030 5.3e-07 58.2 57 52.6
FAN11G0491 Fragaria x ananassa HOM05D000031 ORTHO05D000030 5.3e-07 58.2 57 52.6
EL10Ac8g18357 Beta vulgaris HOM05D000031 ORTHO05D000030 7.0e-07 57.8 62 48.4
Gohir.A10G132833 Gossypium hirsutum HOM05D000031 ORTHO05D000030 7.0e-07 57.8 75 38.7
Gohir.D10G195600 Gossypium hirsutum HOM05D000031 ORTHO05D000030 7.0e-07 57.8 55 50.9
Gorai.011G148400 Gossypium raimondii HOM05D000031 ORTHO05D000030 7.0e-07 57.8 75 38.7
Gorai.011G148800 Gossypium raimondii HOM05D000031 ORTHO05D000030 7.0e-07 57.8 75 38.7
MD09G1145300 Malus domestica HOM05D000031 ORTHO05D000030 7.0e-07 57.8 58 51.7
Ciclev10025047m.g Citrus clementina HOM05D000031 ORTHO05D000030 9.1e-07 57.4 77 40.3
Manes.18G025026 Manihot esculenta HOM05D000031 ORTHO05D000030 9.1e-07 57.4 77 40.3
Cc00_g19980 Coffea canephora HOM05D000031 ORTHO05D000030 1.2e-06 57.0 57 49.1
Cc09_g05950 Coffea canephora HOM05D000031 ORTHO05D000030 1.2e-06 57.0 73 41.1
Migut.L00649 Erythranthe guttata HOM05D000031 ORTHO05D000030 1.2e-06 57.0 72 44.4
Eucgr.A02056 Eucalyptus grandis HOM05D000031 ORTHO05D000030 1.2e-06 57.0 71 46.5
Eucgr.A02057 Eucalyptus grandis HOM05D000031 ORTHO05D000030 1.2e-06 57.0 71 46.5
MD09G1145500 Malus domestica HOM05D000031 ORTHO05D000030 1.2e-06 57.0 71 45.1
Sabra01G0027100 Salix brachista HOM05D000031 ORTHO05D000030 1.2e-06 57.0 118 34.7
SalBow7G3215 Salvia bowleyana HOM05D000031 ORTHO05D000030 1.2e-06 57.0 75 44.0
CiPaw.15G028300 Carya illinoinensis HOM05D000031 ORTHO05D000030 1.5e-06 56.6 69 46.4
Eucgr.A02059 Eucalyptus grandis HOM05D000031 ORTHO05D000030 1.5e-06 56.6 71 45.1
FvH4_5g06860 Fragaria vesca HOM05D000031 ORTHO05D000030 1.5e-06 56.6 58 50.0
FAN04G0455 Fragaria x ananassa HOM05D000031 ORTHO05D000030 1.5e-06 56.6 58 50.0
FAN18G2557 Fragaria x ananassa HOM05D000031 ORTHO05D000030 1.5e-06 56.6 58 50.0
Hma1.2p1_1751F.1_g300790 Hydrangea macrophylla HOM05D000031 ORTHO05D000030 1.5e-06 56.6 57 49.1
Lj1g0015815 Lotus japonicus HOM05D000031 ORTHO05D000030 1.5e-06 56.6 106 35.8
Thecc.04G189700 Theobroma cacao HOM05D000031 ORTHO05D000030 1.5e-06 56.6 62 48.4
CiPaw.04G075000 Carya illinoinensis HOM05D000031 ORTHO05D000030 2.0e-06 56.2 57 49.1
Eucgr.A02061 Eucalyptus grandis HOM05D000031 ORTHO05D000030 2.0e-06 56.2 71 46.5
FAN09G1354 Fragaria x ananassa HOM05D000031 ORTHO05D000030 2.0e-06 56.2 60 51.7
FAN13G3311 Fragaria x ananassa HOM05D000031 ORTHO05D000030 2.0e-06 56.2 58 50.0
Oeu041175.1 Olea europaea HOM05D000031 ORTHO05D000030 2.0e-06 56.2 71 45.1
QL11p048495 Quercus lobata HOM05D000031 ORTHO05D000030 2.0e-06 56.2 55 52.7
Sabra01G0028200 Salix brachista HOM05D000031 ORTHO05D000030 2.0e-06 56.2 118 34.7
AUR62033294 Chenopodium quinoa HOM05D000031 ORTHO05D000030 2.6e-06 55.8 62 46.8
Ciclev10006431m.g Citrus clementina HOM05D000031 ORTHO05D000030 2.6e-06 55.8 74 45.9
Ciclev10025012m.g Citrus clementina HOM05D000031 ORTHO05D000030 2.6e-06 55.8 77 39.0
Gohir.A10G187766 Gossypium hirsutum HOM05D000031 ORTHO05D000030 2.6e-06 55.8 55 45.5
Gohir.D10G195000 Gossypium hirsutum HOM05D000031 ORTHO05D000030 2.6e-06 55.8 55 47.3
Gorai.011G217900 Gossypium raimondii HOM05D000031 ORTHO05D000030 2.6e-06 55.8 55 47.3
HanXRQChr14g0447201 Helianthus annuus HOM05D000031 ORTHO05D000030 2.6e-06 55.8 57 50.9
Manes.04G100400 Manihot esculenta HOM05D000031 ORTHO05D000030 2.6e-06 55.8 106 37.7
Manes.18G025260 Manihot esculenta HOM05D000031 ORTHO05D000030 2.6e-06 55.8 77 40.3
RcHm_v2.0_Chr2g0152591 Rosa chinensis HOM05D000031 ORTHO05D000030 2.6e-06 55.8 52 57.7
RcHm_v2.0_Chr5g0046061 Rosa chinensis HOM05D000031 ORTHO05D000030 2.6e-06 55.8 86 43.0
RcHm_v2.0_Chr7g0191741 Rosa chinensis HOM05D000031 ORTHO05D000030 2.6e-06 55.8 57 50.9
Sc06g0005110 Simmondsia chinensis HOM05D000031 ORTHO05D010178 2.6e-06 55.8 55 54.5
Duzib268G1540 Durio zibethinus HOM05D000031 ORTHO05D000030 3.4e-06 55.5 74 43.2
FAN02G2399 Fragaria x ananassa HOM05D000031 ORTHO05D000030 3.4e-06 55.5 77 40.3
FAN11G2448 Fragaria x ananassa HOM05D000031 ORTHO05D000030 3.4e-06 55.5 57 49.1
MD17G1131700 Malus domestica HOM05D000031 ORTHO05D010178 3.4e-06 55.5 58 50.0
RcHm_v2.0_Chr2g0152901 Rosa chinensis HOM05D000031 ORTHO05D000030 3.4e-06 55.5 63 49.2
Atru.chr6.821 Acer truncatum HOM05D000031 ORTHO05D000030 4.5e-06 55.1 55 49.1
CiPaw.04G073600 Carya illinoinensis HOM05D000031 ORTHO05D000030 4.5e-06 55.1 57 52.6
CiPaw.05G217400 Carya illinoinensis HOM05D000031 ORTHO05D000030 4.5e-06 55.1 57 52.6
AUR62021377 Chenopodium quinoa HOM05D000031 ORTHO05D000030 4.5e-06 55.1 67 44.8
Cc09_g05880 Coffea canephora HOM05D000031 ORTHO05D000030 4.5e-06 55.1 75 40.0
FvH4_3g10540 Fragaria vesca HOM05D000031 ORTHO05D000030 4.5e-06 55.1 57 49.1
FAN11G2641 Fragaria x ananassa HOM05D000031 ORTHO05D000030 4.5e-06 55.1 57 49.1
Gohir.A02G016200 Gossypium hirsutum HOM05D000031 ORTHO05D000030 4.5e-06 55.1 70 42.9
Gorai.005G021500 Gossypium raimondii HOM05D000031 ORTHO05D000030 4.5e-06 55.1 70 42.9
Prupe.3G181000 Prunus persica HOM05D000031 ORTHO05D000030 4.5e-06 55.1 58 50.0
SalBow7G2284 Salvia bowleyana HOM05D000031 ORTHO05D000030 4.5e-06 55.1 76 46.1
SalBow7G3876 Salvia bowleyana HOM05D000031 ORTHO05D000030 4.5e-06 55.1 69 43.5
Actinidia15196 Actinidia chinensis HOM05D000031 ORTHO05D000030 5.9e-06 54.7 62 46.8
Ah.09g230410 Amaranthus hybridus HOM05D000031 ORTHO05D000030 5.9e-06 54.7 63 44.4
CARHR016600 Cardamine hirsuta HOM05D000031 ORTHO05D000030 5.9e-06 54.7 57 45.6
CiPaw.04G073400 Carya illinoinensis HOM05D000031 ORTHO05D000030 5.9e-06 54.7 57 50.9
CiPaw.04G075600 Carya illinoinensis HOM05D000031 ORTHO05D000030 5.9e-06 54.7 57 47.4
ECA232G0739 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.9e-06 54.7 79 41.8
FvH4_6g39031 Fragaria vesca HOM05D000031 ORTHO05D000030 5.9e-06 54.7 57 47.4
FAN14G5046 Fragaria x ananassa HOM05D000031 ORTHO05D000030 5.9e-06 54.7 57 52.6
Manes.18G025000 Manihot esculenta HOM05D000031 ORTHO05D000030 5.9e-06 54.7 57 49.1
Nn7g36474 Nelumbo nucifera HOM05D000031 ORTHO05D000030 5.9e-06 54.7 55 52.7
Migut.L00750 Erythranthe guttata HOM05D000031 ORTHO05D000030 7.7e-06 54.3 69 43.5
Migut.L00752 Erythranthe guttata HOM05D000031 ORTHO05D000030 7.7e-06 54.3 70 44.3
Migut.L00824 Erythranthe guttata HOM05D000031 ORTHO05D000030 7.7e-06 54.3 69 43.5
Eucgr.E03300 Eucalyptus grandis HOM05D000031 ORTHO05D000030 7.7e-06 54.3 69 43.5
FAN02G2639 Fragaria x ananassa HOM05D000031 ORTHO05D000030 7.7e-06 54.3 57 52.6
FAN14G3797 Fragaria x ananassa HOM05D000031 ORTHO05D000030 7.7e-06 54.3 57 52.6
Oeu012675.1 Olea europaea HOM05D000031 ORTHO05D000030 7.7e-06 54.3 91 37.4
SalBow8G5601 Salvia bowleyana HOM05D000031 ORTHO05D000030 7.7e-06 54.3 55 52.7
TAR628G0960 Trochodendron aralioides HOM05D000031 ORTHO05D000030 7.7e-06 54.3 61 45.9
GSVIVG01008432001 Vitis vinifera HOM05D000031 ORTHO05D000030 7.7e-06 54.3 55 52.7


User provided reference genes

Program Settings