Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G1511 Salvia bowleyana HOM05D000974 ORTHO05D007456 2.3e-128 462.6 306 100.0
SalBow4G2102 Salvia bowleyana HOM05D000974 ORTHO05D007456 3.4e-127 458.8 306 87.6
Migut.F00239 Erythranthe guttata HOM05D000974 ORTHO05D007456 3.1e-80 302.8 309 57.3
Ciclev10005489m.g Citrus clementina HOM05D000974 ORTHO05D007456 1.2e-79 300.8 308 53.9
FAN10G1776 Fragaria x ananassa HOM05D000974 ORTHO05D007456 2.6e-79 299.7 309 55.3
Manes.06G157800 Manihot esculenta HOM05D000974 ORTHO05D007456 5.8e-79 298.5 304 54.3
FAN06G0673 Fragaria x ananassa HOM05D000974 ORTHO05D007456 7.6e-79 298.1 309 55.0
FAN06G4709 Fragaria x ananassa HOM05D000974 ORTHO05D007456 7.6e-79 298.1 309 55.0
FAN03G2436 Fragaria x ananassa HOM05D000974 ORTHO05D006000 1.7e-78 297.0 305 55.4
CSS0027071 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D007456 2.2e-78 296.6 304 56.2
Gohir.A09G183700 Gossypium hirsutum HOM05D000974 ORTHO05D007456 2.2e-78 296.6 304 57.2
Gorai.006G200500 Gossypium raimondii HOM05D000974 ORTHO05D007456 2.2e-78 296.6 304 56.9
MD07G1285800 Malus domestica HOM05D000974 ORTHO05D007456 2.2e-78 296.6 310 54.5
RcHm_v2.0_Chr1g0380171 Rosa chinensis HOM05D000974 ORTHO05D007456 2.2e-78 296.6 304 56.6
FvH4_7g31090 Fragaria vesca HOM05D000974 ORTHO05D007456 3.8e-78 295.8 309 54.7
Potri.015G021400 Populus trichocarpa HOM05D000974 ORTHO05D007456 3.8e-78 295.8 306 54.6
Thecc.03G193600 Theobroma cacao HOM05D000974 ORTHO05D007456 3.8e-78 295.8 304 53.6
Gohir.D09G178500 Gossypium hirsutum HOM05D000974 ORTHO05D007456 6.4e-78 295.0 304 55.9
TWI39G1278 Tripterygium wilfordii HOM05D000974 ORTHO05D007456 1.1e-77 294.3 306 54.9
FAN10G1818 Fragaria x ananassa HOM05D000974 ORTHO05D006000 1.9e-77 293.5 305 55.1
MD01G1215900 Malus domestica HOM05D000974 ORTHO05D007456 1.9e-77 293.5 310 54.5
TAR636G3288 Trochodendron aralioides HOM05D000974 ORTHO05D007456 1.9e-77 293.5 306 63.7
SGA_v2.0_scaffold192G40573 Striga asiatica HOM05D000974 ORTHO05D007456 1.6e-76 290.4 307 54.1
Potri.015G021100 Populus trichocarpa HOM05D000974 ORTHO05D007456 2.7e-76 289.7 304 53.9
TAR375G0325 Trochodendron aralioides HOM05D000974 ORTHO05D007456 2.7e-76 289.7 308 69.2
GSVIVG01028702001 Vitis vinifera HOM05D000974 ORTHO05D007456 2.7e-76 289.7 302 56.6
PGR142G2075 Punica granatum HOM05D000974 ORTHO05D007456 1.8e-75 287.0 306 52.3
Atru.chr1.258 Acer truncatum HOM05D000974 ORTHO05D007456 3.0e-75 286.2 304 67.8
COL.COLO4_35640 Corchorus olitorius HOM05D000974 ORTHO05D007456 3.0e-75 286.2 304 52.6
Oeu060978.1 Olea europaea HOM05D000974 ORTHO05D007456 3.0e-75 286.2 303 54.1
Haze_00118 Corylus avellana HOM05D000974 ORTHO05D007456 3.9e-75 285.8 306 59.5
Prupe.2G308000 Prunus persica HOM05D000974 ORTHO05D002201 1.5e-74 283.9 306 52.9
AUR62006147 Chenopodium quinoa HOM05D000974 ORTHO05D007456 2.5e-74 283.1 302 53.6
EL10Ac3g05342 Beta vulgaris HOM05D000974 ORTHO05D007456 9.6e-74 281.2 313 52.7
DCAR_020306 Daucus carota HOM05D000974 ORTHO05D007456 1.3e-73 280.8 305 52.8
Actinidia34202 Actinidia chinensis HOM05D000974 ORTHO05D007456 4.8e-73 278.9 302 54.6
Potri.012G031000 Populus trichocarpa HOM05D000974 ORTHO05D007456 1.1e-72 277.7 306 51.0
Ca_16682_v3 Cicer arietinum L. HOM05D000974 ORTHO05D007456 1.4e-72 277.3 306 51.3
Rhsim03G0199900 Rhododendron simsii HOM05D000974 ORTHO05D007456 1.4e-72 277.3 305 60.7
CsaV3_5G000660 Cucumis sativus L. HOM05D000974 ORTHO05D007456 4.0e-72 275.8 305 52.5
Nitab4.5_0005625g0010 Nicotiana tabacum HOM05D000974 ORTHO05D007456 6.9e-72 275.0 304 54.6
Cc02_g01830 Coffea canephora HOM05D000974 ORTHO05D007456 1.2e-71 274.2 305 50.8
Cfa016368 Carpinus fangiana HOM05D000974 ORTHO05D007456 1.5e-71 273.9 307 67.4
Nitab4.5_0002589g0050 Nicotiana tabacum HOM05D000974 ORTHO05D007456 3.4e-71 272.7 304 53.9
Cpa.g.sc34.147 Carica papaya HOM05D000974 ORTHO05D007456 4.5e-71 272.3 303 56.1
BcaNung01212 Brassica carinata HOM05D000974 ORTHO05D007456 5.8e-71 271.9 314 51.0
MBI07_g34227_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 1.3e-70 270.8 307 68.4
Peaxi162Scf00904g00123 Petunia axillaris HOM05D000974 ORTHO05D007456 2.2e-70 270.0 304 54.6
C07p43580 Brassica napus HOM05D000974 ORTHO05D007456 2.9e-70 269.6 317 51.4
BolC7t44885H Brassica oleracea HOM05D000974 ORTHO05D007456 2.9e-70 269.6 317 51.4
DCAR_014533 Daucus carota HOM05D000974 ORTHO05D007456 2.9e-70 269.6 306 66.7
Glyma.06G125900 Glycine max HOM05D000974 ORTHO05D007456 2.9e-70 269.6 304 48.7
Lalb_Chr11g0066601 Lupinus albus HOM05D000974 ORTHO05D007456 2.9e-70 269.6 306 51.3
arahy.Tifrunner.gnm1.ann1.D5FDUQ Arachis hypogaea HOM05D000974 ORTHO05D007456 3.8e-70 269.2 304 50.0
arahy.Tifrunner.gnm1.ann1.LG8YER Arachis hypogaea HOM05D000974 ORTHO05D007456 3.8e-70 269.2 304 50.0
A06p34970 Brassica napus HOM05D000974 ORTHO05D007456 3.8e-70 269.2 316 50.6
BraA06t26421Z Brassica rapa HOM05D000974 ORTHO05D007456 3.8e-70 269.2 316 50.6
TPR.G17305 Trifolium pratense HOM05D000974 ORTHO05D007456 3.8e-70 269.2 306 50.0
BcaNung01815 Brassica carinata HOM05D000974 ORTHO05D007456 4.9e-70 268.9 316 50.6
Thhalv10005277m.g Eutrema salsugineum HOM05D000974 ORTHO05D007456 4.9e-70 268.9 316 50.0
ClCG01G000560 Citrullus lanatus HOM05D000974 ORTHO05D007456 1.1e-69 267.7 305 51.1
Carub.0006s2186 Capsella rubella HOM05D000974 ORTHO05D007456 1.9e-69 266.9 315 54.9
Aqoxy7G00132 Aquilegia oxysepala HOM05D000974 ORTHO05D007456 2.5e-69 266.5 307 58.3
AT5G24130 Arabidopsis thaliana HOM05D000974 ORTHO05D007456 2.5e-69 266.5 315 49.8
VMungo1309G2916 Vigna mungo HOM05D000974 ORTHO05D007456 3.2e-69 266.2 302 49.7
Dinv28331 Davidia involucrata HOM05D000974 ORTHO05D007456 4.2e-69 265.8 253 56.9
Aa31LG11G3400 Aethionema arabicum HOM05D000974 ORTHO05D007456 2.1e-68 263.5 312 49.7
AL6G35490 Arabidopsis lyrata HOM05D000974 ORTHO05D007456 2.1e-68 263.5 316 49.7
CARHR189450 Cardamine hirsuta HOM05D000974 ORTHO05D007456 3.5e-68 262.7 316 49.4
AUR62019342 Chenopodium quinoa HOM05D000974 ORTHO05D007456 4.6e-68 262.3 302 52.0
Glyma.04G238050 Glycine max HOM05D000974 ORTHO05D007456 4.6e-68 262.3 304 47.7
CANSAT21G0519 Cannabis sativa HOM05D000974 ORTHO05D007456 1.8e-67 260.4 312 49.0
Phvul.009G137800 Phaseolus vulgaris HOM05D000974 ORTHO05D007456 2.3e-67 260.0 302 48.7
Sabra12G0020600 Salix brachista HOM05D000974 ORTHO05D007456 2.3e-67 260.0 317 47.0
Sp2g23180 Schrenkiella parvula HOM05D000974 ORTHO05D007456 3.9e-67 259.2 317 49.2
THA.LOC104821367 Tarenaya hassleriana HOM05D000974 ORTHO05D007456 3.9e-67 259.2 310 50.0
Sed0023834 Sechium edule HOM05D000974 ORTHO05D007456 6.7e-67 258.5 305 48.9
vmacro06564 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 6.7e-67 258.5 345 46.4
Medtr3g090955 Medicago truncatula HOM05D000974 ORTHO05D007456 1.5e-66 257.3 305 48.9
vmacro10108 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 3.3e-66 256.1 304 49.0
PSO135G0499 Papaver somniferum HOM05D000974 ORTHO05D007456 2.1e-65 253.4 307 47.6
Rhsim09G0204100 Rhododendron simsii HOM05D000974 ORTHO05D007456 3.7e-65 252.7 302 48.7
PSO384G1506 Papaver somniferum HOM05D000974 ORTHO05D007456 6.2e-65 251.9 307 47.6
ECA232G4254 Erigeron canadensis HOM05D000974 ORTHO05D007456 1.0e-62 244.6 305 52.1
unitig_747.g21851 Utricularia gibba HOM05D000974 ORTHO05D007456 1.0e-62 244.6 266 52.3
Lsat_1_v5_gn_9_57980 Lactuca sativa HOM05D000974 ORTHO05D007456 8.4e-62 241.5 309 48.2
Lj1g0000480 Lotus japonicus HOM05D000974 ORTHO05D007456 2.1e-60 236.9 302 45.7
HanXRQChr09g0253031 Helianthus annuus HOM05D000974 ORTHO05D007456 4.6e-60 235.7 295 50.8
Oeu060979.1 Olea europaea HOM05D000974 ORTHO05D007456 4.6e-60 235.7 171 70.2
Nn1g01835 Nelumbo nucifera HOM05D000974 ORTHO05D007456 6.1e-60 235.3 307 62.9
Potri.015G021300 Populus trichocarpa HOM05D000974 ORTHO05D007456 9.7e-58 228.0 170 67.6
Lj1A1013G39 Lonicera japonica HOM05D000974 ORTHO05D007456 4.8e-57 225.7 305 46.2
Psat5g079560 Pisum sativum HOM05D000974 ORTHO05D007456 4.8e-57 225.7 302 44.7
Duzib084G1361 Durio zibethinus HOM05D000974 ORTHO05D007456 2.4e-56 223.4 302 51.7
Lsat_1_v5_gn_2_134181 Lactuca sativa HOM05D000974 ORTHO05D007456 3.4e-55 219.5 264 47.0
QL09p010742 Quercus lobata HOM05D000974 ORTHO05D007456 2.2e-54 216.9 242 70.2
HPP92_005207 Vanilla planifolia HOM05D000974 ORTHO05D007456 2.2e-54 216.9 310 47.7
CDE10G0850 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 1.4e-51 207.6 304 60.5
HanXRQChr14g0462881 Helianthus annuus HOM05D000974 ORTHO05D007456 1.8e-51 207.2 254 47.2
Rhsim09G0204200 Rhododendron simsii HOM05D000974 ORTHO05D007456 3.1e-48 196.4 259 44.8
Lj3A909T48 Lonicera japonica HOM05D000974 ORTHO05D007456 1.9e-45 187.2 272 43.0
Zm00001eb238160 Zea mays HOM05D000974 ORTHO05D007456 1.2e-44 184.5 316 39.9
Os02g0257200 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 6.1e-44 182.2 277 61.0
CiPaw.05G257400 Carya illinoinensis HOM05D000974 ORTHO05D007456 4.8e-41 172.6 134 66.4
Oeu060977.1 Olea europaea HOM05D000974 ORTHO05D007456 5.5e-37 159.1 119 68.9
MBI07_g45742_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 2.1e-36 157.1 307 39.1
Lalb_Chr08g0240561 Lupinus albus HOM05D000974 ORTHO05D007456 3.3e-34 149.8 124 61.3
AagrBONN_evm.TU.Sc2ySwM_117.3541 Anthoceros agrestis HOM05D000974 ORTHO05D007456 2.2e-33 147.1 284 34.9
Zm00001eb345000 Zea mays HOM05D000974 ORTHO05D007456 5.3e-32 142.5 276 37.3
ECA238G2040 Erigeron canadensis HOM05D005084 ORTHO05D006254 3.5e-31 139.8 233 39.1
Mapoly0123s0011 Marchantia polymorpha HOM05D000974 ORTHO05D007456 5.9e-31 139.0 277 36.1
Os05g0586700 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 2.1e-28 130.6 304 33.2
Actinidia08630 Actinidia chinensis HOM05D000974 ORTHO05D007456 1.4e-27 127.9 112 59.8
Sopen03g003300 Solanum pennellii HOM05D000974 ORTHO05D007456 8.8e-27 125.2 186 46.8
SMO347G0394 Selaginella moellendorffii HOM05D000974 ORTHO05D007456 2.0e-26 124.0 175 41.1
Pp3c2_19140 Physcomitrium patens HOM05D000974 ORTHO05D007456 5.7e-26 122.5 310 33.5
PGSC0003DMG400009074 Solanum tuberosum HOM05D000974 ORTHO05D007456 1.8e-24 117.5 142 53.5
Rhsim02G0197500 Rhododendron simsii HOM05D000974 ORTHO05D007456 3.1e-24 116.7 170 42.4
ATR0589G055 Amborella trichopoda HOM05D000974 ORTHO05D007456 9.1e-24 115.2 120 55.0
Rhsim04G0082700 Rhododendron simsii HOM05D000974 ORTHO05D007456 1.6e-23 114.4 170 41.8
Hma1.2p1_1655F.1_g295980 Hydrangea macrophylla HOM05D000974 ORTHO05D007456 3.8e-22 109.8 189 46.0
Pp3c3_31670 Physcomitrium patens HOM05D000974 ORTHO05D007456 3.6e-20 103.2 158 43.0
FAN01G0307 Fragaria x ananassa HOM05D000974 ORTHO05D007456 1.0e-19 101.7 309 31.4
Lalb_Chr08g0240551 Lupinus albus HOM05D000974 ORTHO05D007456 6.6e-14 82.4 91 48.4
TAR629G1462 Trochodendron aralioides HOM05D000974 ORTHO05D007456 3.3e-13 80.1 52 69.2
CiPaw.05G257300 Carya illinoinensis HOM05D000974 ORTHO05D007456 9.5e-13 78.6 84 56.0
Lalb_Chr08g0240541 Lupinus albus HOM05D000974 ORTHO05D007456 2.1e-12 77.4 83 53.0
Atru.chr1.262 Acer truncatum HOM05D000974 ORTHO05D007456 1.5e-10 71.2 82 52.4
vmacro10109 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 2.6e-10 70.5 149 32.2
CDE10G0750 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 2.2e-09 67.4 77 53.2
ATR0589G008 Amborella trichopoda HOM05D000974 ORTHO05D007456 4.6e-07 59.7 82 47.6
DCAR_022594 Daucus carota HOM05D000974 ORTHO05D007456 4.6e-07 59.7 73 50.7
COL.COLO4_02792 Corchorus olitorius HOM05D000974 ORTHO05D007456 1.0e-06 58.5 73 47.9


User provided reference genes

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