Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G1355 Salvia bowleyana HOM05D000087 ORTHO05D005735 5.2e-182 641.0 333 100.0
MSTRG.22476 Avicennia marina HOM05D000087 ORTHO05D005735 1.6e-93 347.1 343 57.7
Migut.H02249 Erythranthe guttata HOM05D000087 ORTHO05D005735 2.5e-91 339.7 347 54.5
SGA_v2.0_scaffold123G33449 Striga asiatica HOM05D000087 ORTHO05D005735 6.3e-87 325.1 357 52.9
Oeu019648.1 Olea europaea HOM05D000087 ORTHO05D005735 1.8e-81 307.0 344 50.3
Dinv11465 Davidia involucrata HOM05D000087 ORTHO05D005735 1.3e-76 290.8 368 45.1
Actinidia22240 Actinidia chinensis HOM05D000087 ORTHO05D005735 4.1e-70 269.2 355 45.1
Hma1.2p1_0198F.1_g085370 Hydrangea macrophylla HOM05D000087 ORTHO05D005735 2.3e-68 263.5 347 44.1
Lsat_1_v5_gn_3_13301 Lactuca sativa HOM05D000087 ORTHO05D005735 9.5e-67 258.1 301 48.2
TAR629G0355 Trochodendron aralioides HOM05D000087 ORTHO05D005735 4.7e-66 255.8 345 42.3
GSVIVG01019707001 Vitis vinifera HOM05D000087 ORTHO05D005735 4.7e-66 255.8 348 41.7
Lj2C147G10 Lonicera japonica HOM05D000087 ORTHO05D005735 4.4e-64 249.2 357 42.6
vmacro08520 Vaccinium macrocarpon HOM05D000087 ORTHO05D005735 1.3e-63 247.7 352 42.6
Rhsim02G0255700 Rhododendron simsii HOM05D000087 ORTHO05D005735 9.2e-62 241.5 355 40.8
Gohir.D08G120500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 1.2e-58 231.1 350 40.0
Gorai.004G127300 Gossypium raimondii HOM05D000087 ORTHO05D005735 1.1e-57 228.0 350 39.7
TWI81G0850 Tripterygium wilfordii HOM05D000087 ORTHO05D005735 1.4e-57 227.6 338 39.6
ECA246G1365 Erigeron canadensis HOM05D000087 ORTHO05D005735 2.3e-57 226.9 346 39.6
Gohir.A08G107500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 3.1e-57 226.5 350 40.0
Duzib068G0232 Durio zibethinus HOM05D000087 ORTHO05D005735 1.2e-56 224.6 350 38.9
Thecc.03G213700 Theobroma cacao HOM05D000087 ORTHO05D005735 1.2e-56 224.6 371 38.0
Cfa011874 Carpinus fangiana HOM05D000087 ORTHO05D005735 1.4e-54 217.6 365 35.9
Ciclev10018581m.g Citrus clementina HOM05D000087 ORTHO05D005735 1.4e-54 217.6 349 39.3
HanXRQChr01g0016041 Helianthus annuus HOM05D000087 ORTHO05D005735 2.4e-54 216.9 350 40.3
Nn3g18737 Nelumbo nucifera HOM05D000087 ORTHO05D005735 2.4e-54 216.9 351 38.2
Haze_09232 Corylus avellana HOM05D000087 ORTHO05D005735 7.8e-53 211.8 360 35.8
RcHm_v2.0_Chr7g0188131 Rosa chinensis HOM05D000087 ORTHO05D005735 5.1e-52 209.1 345 37.4
PSO063G0654 Papaver somniferum HOM05D000087 ORTHO05D005735 6.6e-52 208.8 348 38.2
Prupe.5G137300 Prunus persica HOM05D000087 ORTHO05D005735 2.1e-50 203.8 334 38.3
Eucgr.D02539 Eucalyptus grandis HOM05D000087 ORTHO05D005735 1.1e-49 201.4 350 35.7
QL02p026653 Quercus lobata HOM05D000087 ORTHO05D005735 2.3e-49 200.3 348 37.9
CsaV3_5G001350 Cucumis sativus L. HOM05D000087 ORTHO05D005735 3.1e-49 199.9 348 35.3
PGR031G2531 Punica granatum HOM05D000087 ORTHO05D005735 3.1e-49 199.9 357 36.7
FAN08G3226 Fragaria x ananassa HOM05D000087 ORTHO05D005735 4.0e-49 199.5 356 35.7
PSO782G2195 Papaver somniferum HOM05D000087 ORTHO05D005735 4.0e-49 199.5 349 37.0
FvH4_5g10170 Fragaria vesca HOM05D000087 ORTHO05D005735 5.2e-49 199.1 356 35.4
FAN18G4270 Fragaria x ananassa HOM05D000087 ORTHO05D005735 5.2e-49 199.1 356 35.1
MD06G1127500 Malus domestica HOM05D000087 ORTHO05D005735 1.2e-48 198.0 347 37.5
FAN18G0494 Fragaria x ananassa HOM05D000087 ORTHO05D005735 1.5e-48 197.6 356 35.1
Hund03336 Selenicereus undatus HOM05D000087 ORTHO05D005735 3.4e-48 196.4 349 38.1
Cc08_g17160 Coffea canephora HOM05D000087 ORTHO05D005735 4.4e-48 196.1 303 39.9
FAN04G3195 Fragaria x ananassa HOM05D000087 ORTHO05D005735 5.8e-48 195.7 348 35.6
Manes.17G015000 Manihot esculenta HOM05D000087 ORTHO05D005735 7.6e-48 195.3 352 35.2
Sed0004639 Sechium edule HOM05D000087 ORTHO05D005735 7.6e-48 195.3 359 34.0
CANSAT64G2851 Cannabis sativa HOM05D000087 ORTHO05D005735 6.4e-47 192.2 336 37.2
Sabra16G0307100 Salix brachista HOM05D000087 ORTHO05D005735 1.9e-46 190.7 353 36.5
Potri.001G454200 Populus trichocarpa HOM05D000087 ORTHO05D005735 6.0e-45 185.7 341 34.9
Ca_16291_v3 Cicer arietinum L. HOM05D000087 ORTHO05D005735 2.3e-44 183.7 317 36.0
Cpa.g.sc37.117 Carica papaya HOM05D000087 ORTHO05D005735 5.1e-44 182.6 351 34.8
EL10Ac2g03880 Beta vulgaris HOM05D000087 ORTHO05D005735 1.1e-43 181.4 357 34.2
Psat5g111000 Pisum sativum HOM05D000087 ORTHO05D005735 4.3e-43 179.5 350 33.4
Medtr3g080640 Medicago truncatula HOM05D000087 ORTHO05D005735 4.7e-42 176.0 334 33.2
Lalb_Chr14g0362591 Lupinus albus HOM05D000087 ORTHO05D005735 1.1e-41 174.9 352 32.7
AUR62009145 Chenopodium quinoa HOM05D000087 ORTHO05D005735 1.5e-40 171.0 359 33.1
ATR0579G142 Amborella trichopoda HOM05D000087 ORTHO05D005735 2.0e-40 170.6 346 34.1
Lj6g0001276 Lotus japonicus HOM05D000087 ORTHO05D005735 2.0e-40 170.6 359 32.0
MELO3C005812.2 Cucumis melo HOM05D000087 ORTHO05D005735 5.8e-40 169.1 416 29.8
Glyma.06G181000 Glycine max HOM05D000087 ORTHO05D005735 7.6e-40 168.7 355 33.0
AUR62039113 Chenopodium quinoa HOM05D000087 ORTHO05D005735 4.9e-39 166.0 354 31.9
arahy.Tifrunner.gnm1.ann1.0XGN9Z Arachis hypogaea HOM05D000087 ORTHO05D005735 1.4e-38 164.5 373 30.8
THA.LOC104806594 Tarenaya hassleriana HOM05D000087 ORTHO05D005735 1.9e-38 164.1 358 33.5
ClCG01G001230 Citrullus lanatus HOM05D000087 ORTHO05D005735 9.3e-38 161.8 432 27.8
arahy.Tifrunner.gnm1.ann1.DH86LW Arachis hypogaea HOM05D000087 ORTHO05D005735 2.7e-37 160.2 372 30.9
AT4G38120 Arabidopsis thaliana HOM05D000087 ORTHO05D005735 1.0e-36 158.3 356 32.0
CDE02G0276 Ceratophyllum demersum HOM05D000087 ORTHO05D005735 2.3e-36 157.1 289 33.6
Aqoxy5G04397 Aquilegia oxysepala HOM05D000087 ORTHO05D005735 3.0e-36 156.8 364 32.7
Carub.0007s0001 Capsella rubella HOM05D000087 ORTHO05D005735 8.7e-36 155.2 360 30.8
C01p21480 Brassica napus HOM05D000087 ORTHO05D005735 2.1e-34 150.6 354 31.1
BolC1t02068H Brassica oleracea HOM05D000087 ORTHO05D005735 2.1e-34 150.6 354 31.1
A01p17150 Brassica napus HOM05D000087 ORTHO05D005735 3.6e-34 149.8 347 32.6
BraA01t01671Z Brassica rapa HOM05D000087 ORTHO05D005735 3.6e-34 149.8 347 32.6
AL7G10010 Arabidopsis lyrata HOM05D000087 ORTHO05D005735 9.0e-33 145.2 356 30.6
Sp7g37630 Schrenkiella parvula HOM05D000087 ORTHO05D005735 1.5e-32 144.4 360 30.0
COL.COLO4_10863 Corchorus olitorius HOM05D000087 ORTHO05D005735 5.8e-32 142.5 356 31.7
Solyc07g008450.3 Solanum lycopersicum HOM05D000087 ORTHO05D005735 1.7e-31 141.0 240 38.3
Sopen07g004380 Solanum pennellii HOM05D000087 ORTHO05D005735 2.2e-31 140.6 240 38.3
CAN.G1548.2 Capsicum annuum HOM05D000087 ORTHO05D005735 3.2e-30 136.7 238 37.0
MBI04_g04806_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 1.2e-29 134.8 251 35.9
Nitab4.5_0007502g0010 Nicotiana tabacum HOM05D000087 ORTHO05D005735 1.6e-29 134.4 169 44.4
DCAR_010123 Daucus carota HOM05D000087 ORTHO05D005735 2.1e-29 134.0 129 50.4
Peaxi162Scf00046g00228 Petunia axillaris HOM05D000087 ORTHO05D005735 2.1e-29 134.0 244 36.1
Sc01g0010950 Simmondsia chinensis HOM05D000087 ORTHO05D005735 6.0e-29 132.5 281 31.7
Zm00001eb416210 Zea mays HOM05D000087 ORTHO05D005735 2.8e-26 123.6 350 28.3
Thhalv10024269m.g Eutrema salsugineum HOM05D000087 ORTHO05D005735 3.6e-26 123.2 360 27.2
HPP92_028198 Vanilla planifolia HOM05D000087 ORTHO05D005735 3.6e-26 123.2 143 42.7
CiPaw.11G106300 Carya illinoinensis HOM05D000087 ORTHO05D005735 3.4e-24 116.7 251 32.3
Duzib084G1107 Durio zibethinus HOM05D000087 ORTHO05D005735 4.5e-24 116.3 311 30.9
Aa31LG6G16960 Aethionema arabicum HOM05D000087 ORTHO05D005735 5.8e-24 115.9 361 29.1
Phvul.011G167550 Phaseolus vulgaris HOM05D000087 ORTHO05D005735 6.4e-23 112.5 143 42.0
SEGI_26806 Sequoiadendron giganteum HOM05D000087 ORTHO05D005735 6.4e-23 112.5 127 43.3
MD14G1142800 Malus domestica HOM05D000087 ORTHO05D005735 1.6e-21 107.8 231 32.0
MBI04_g04804_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 2.7e-21 107.1 98 55.1
AL8G10020 Arabidopsis lyrata HOM05D000087 ORTHO05D005735 5.1e-20 102.8 150 37.3
VMungo1127G1440 Vigna mungo HOM05D000087 ORTHO05D005735 1.9e-19 100.9 148 39.9
MBI17_g33112_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 1.1e-17 95.1 64 65.6
Nitab4.5_0000491g0190 Nicotiana tabacum HOM05D000087 ORTHO05D005735 2.4e-17 94.0 242 31.4
Pp3c3_37190 Physcomitrium patens HOM05D000087 ORTHO05D005735 1.3e-15 88.2 139 41.0
SMO367G1062 Selaginella moellendorffii HOM05D000087 ORTHO05D005735 1.4e-14 84.7 324 25.6
Mapoly0043s0141 Marchantia polymorpha HOM05D000087 ORTHO05D005735 2.5e-14 84.0 209 30.6
MBI04_g07085_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 3.3e-11 73.6 92 43.5
MBI04_g39794_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 9.6e-11 72.0 92 43.5
Ah.10g034360 Amaranthus hybridus HOM05D000087 ORTHO05D005735 1.4e-09 68.2 75 56.0
CSS0025060 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 8.4e-07 58.9 61 47.5


User provided reference genes

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