Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G1354 Salvia bowleyana HOM05D004925 ORTHO05D005643 1.9e-157 559.3 313 100.0
SalBow4G3044 Salvia bowleyana HOM05D004925 ORTHO05D005643 1.3e-155 553.1 313 99.4
MSTRG.5000 Avicennia marina HOM05D004925 ORTHO05D005643 7.5e-106 387.9 300 71.7
Migut.N01664 Erythranthe guttata HOM05D004925 ORTHO05D005643 1.4e-96 357.1 326 69.9
SGA_v2.0_scaffold95G28775 Striga asiatica HOM05D004925 ORTHO05D005643 1.4e-83 313.9 282 64.9
Oeu053533.1 Olea europaea HOM05D004925 ORTHO05D005643 7.8e-79 298.1 303 59.7
Oeu024926.1 Olea europaea HOM05D004925 ORTHO05D005643 1.7e-73 280.4 373 49.1
Peaxi162Scf00878g00036 Petunia axillaris HOM05D004925 ORTHO05D005643 5.4e-72 275.4 306 54.2
Sopen01g033490 Solanum pennellii HOM05D004925 ORTHO05D005643 1.1e-69 267.7 312 51.6
Solyc01g073920.3 Solanum lycopersicum HOM05D004925 ORTHO05D005643 4.3e-69 265.8 312 51.3
SGA_v2.0_scaffold4G02236 Striga asiatica HOM05D001227 ORTHO05D001082 9.9e-66 254.6 268 56.0
Nitab4.5_0000892g0140 Nicotiana tabacum HOM05D004925 ORTHO05D005643 3.6e-60 236.1 344 46.5
CAN.G261.6 Capsicum annuum HOM05D004925 ORTHO05D005643 2.4e-59 233.4 219 58.4
unitig_22.g5889 Utricularia gibba HOM05D004925 ORTHO05D005643 4.0e-59 232.6 312 47.8
Dinv43931 Davidia involucrata HOM05D004925 ORTHO05D005643 3.2e-56 223.0 319 47.6
Dinv43491 Davidia involucrata HOM05D004925 ORTHO05D005643 9.2e-56 221.5 311 47.3
Hma1.2p1_0860F.1_g229570 Hydrangea macrophylla HOM05D004925 ORTHO05D005643 2.3e-54 216.9 329 45.3
Cc02_g27070 Coffea canephora HOM05D004925 ORTHO05D005643 2.5e-53 213.4 314 46.5
CiPaw.13G000800 Carya illinoinensis HOM05D004925 ORTHO05D005643 2.0e-50 203.8 256 51.6
Rhsim01G0134400 Rhododendron simsii HOM05D004925 ORTHO05D005643 9.9e-50 201.4 271 47.6
GSVIVG01001367001 Vitis vinifera HOM05D004925 ORTHO05D005643 1.9e-48 197.2 314 45.5
Manes.10G151100 Manihot esculenta HOM05D004925 ORTHO05D005643 1.5e-45 187.6 296 42.9
Cfa004806 Carpinus fangiana HOM05D004925 ORTHO05D005643 3.3e-45 186.4 298 45.0
TWI09G1281 Tripterygium wilfordii HOM05D004925 ORTHO05D005643 4.3e-45 186.0 313 43.5
MD07G1002600 Malus domestica HOM05D004925 ORTHO05D005643 2.8e-44 183.3 250 46.4
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 1.8e-43 180.6 311 43.4
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 1.8e-43 180.6 311 43.4
TWI73G1095 Tripterygium wilfordii HOM05D004925 ORTHO05D005643 2.4e-43 180.3 304 43.1
vmacro12585 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 5.3e-43 179.1 342 40.1
MD02G1318600 Malus domestica HOM05D004925 ORTHO05D005643 1.5e-42 177.6 319 42.0
ClCG10G012660 Citrullus lanatus HOM05D004925 ORTHO05D005643 4.5e-42 176.0 302 44.0
TAR369G0809 Trochodendron aralioides HOM05D004925 ORTHO05D005643 9.9e-42 174.9 260 46.9
Nn2g15712 Nelumbo nucifera HOM05D004925 ORTHO05D005643 1.7e-41 174.1 298 44.0
CsaV3_3G032460 Cucumis sativus L. HOM05D004925 ORTHO05D005643 1.4e-40 171.0 311 42.8
HanXRQChr01g0018661 Helianthus annuus HOM05D004925 ORTHO05D005643 1.4e-40 171.0 277 43.0
Sc17g0006850 Simmondsia chinensis HOM05D004925 ORTHO05D005643 1.4e-40 171.0 269 44.6
THA.LOC104801020 Tarenaya hassleriana HOM05D004925 ORTHO05D005643 1.9e-40 170.6 295 44.1
Actinidia15855 Actinidia chinensis HOM05D004925 ORTHO05D005643 7.1e-40 168.7 302 41.7
AL4G28340 Arabidopsis lyrata HOM05D004925 ORTHO05D005643 1.6e-39 167.5 287 44.6
Lsat_1_v5_gn_1_110881 Lactuca sativa HOM05D004925 ORTHO05D005643 2.1e-39 167.2 314 40.4
ECA248G0029 Erigeron canadensis HOM05D004925 ORTHO05D005643 2.7e-39 166.8 283 45.6
Gohir.D08G037401 Gossypium hirsutum HOM05D004925 ORTHO05D005643 2.7e-39 166.8 175 55.4
TAR623G0394 Trochodendron aralioides HOM05D004925 ORTHO05D005643 2.7e-39 166.8 294 42.5
Thecc.01G416300 Theobroma cacao HOM05D004925 ORTHO05D005643 3.5e-39 166.4 254 44.9
Potri.001G229800 Populus trichocarpa HOM05D004925 ORTHO05D005643 4.6e-39 166.0 356 37.6
CANSAT11G0505 Cannabis sativa HOM05D004925 ORTHO05D005643 1.8e-38 164.1 271 44.6
COL.COLO4_25137 Corchorus olitorius HOM05D004925 ORTHO05D005643 1.8e-38 164.1 249 47.4
arahy.Tifrunner.gnm1.ann1.WEBP2W Arachis hypogaea HOM05D004925 ORTHO05D005643 5.1e-38 162.5 251 41.8
Gorai.004G035400 Gossypium raimondii HOM05D004925 ORTHO05D005643 5.1e-38 162.5 246 44.3
CARHR126790 Cardamine hirsuta HOM05D004925 ORTHO05D005643 7.4e-37 158.7 291 42.3
Duzib114G0283 Durio zibethinus HOM05D004925 ORTHO05D005643 9.6e-37 158.3 254 42.5
Gohir.A08G026720 Gossypium hirsutum HOM05D004925 ORTHO05D005643 1.3e-36 157.9 251 43.4
Sed0003173 Sechium edule HOM05D004925 ORTHO05D005643 1.3e-36 157.9 276 42.0
Hund25510 Selenicereus undatus HOM05D004925 ORTHO05D005643 1.3e-36 157.9 265 42.6
Carub.0004s1427 Capsella rubella HOM05D004925 ORTHO05D005643 3.7e-36 156.4 248 44.8
Atru.chr11.2695 Acer truncatum HOM05D004925 ORTHO05D005643 4.8e-36 156.0 269 42.4
AT2G32840 Arabidopsis thaliana HOM05D004925 ORTHO05D005643 4.8e-36 156.0 282 42.2
RcHm_v2.0_Chr1g0313411 Rosa chinensis HOM05D004925 ORTHO05D005643 4.8e-36 156.0 168 53.6
arahy.Tifrunner.gnm1.ann1.BFX48A Arachis hypogaea HOM05D004925 ORTHO05D005643 6.2e-36 155.6 281 39.9
MELO3C030929.2 Cucumis melo HOM05D004925 ORTHO05D005643 1.4e-35 154.5 363 37.5
MBI19_g23208_MAGBIO Magnolia biondii HOM05D004925 ORTHO05D005643 1.4e-35 154.5 266 41.4
Nitab4.5_0005278g0010 Nicotiana tabacum HOM05D004925 ORTHO05D005643 4.0e-35 152.9 254 44.1
FAN03G1097 Fragaria x ananassa HOM05D004925 ORTHO05D005643 1.5e-34 151.0 158 55.7
FAN01G2076 Fragaria x ananassa HOM05D004925 ORTHO05D005643 2.6e-34 150.2 177 52.5
FAN06G2494 Fragaria x ananassa HOM05D004925 ORTHO05D005643 2.6e-34 150.2 158 55.1
FAN01G0312 Fragaria x ananassa HOM05D004925 ORTHO05D005643 4.5e-34 149.4 251 44.2
FAN10G2396 Fragaria x ananassa HOM05D004925 ORTHO05D005643 4.5e-34 149.4 245 44.9
Sp4g15220 Schrenkiella parvula HOM05D004925 ORTHO05D005643 4.5e-34 149.4 255 44.3
Eucgr.G03409 Eucalyptus grandis HOM05D004925 ORTHO05D005643 5.8e-34 149.1 241 44.8
Cpa.g.sc189.17 Carica papaya HOM05D004925 ORTHO05D005643 7.6e-34 148.7 148 59.5
FvH4_7g00160 Fragaria vesca HOM05D004925 ORTHO05D005643 1.0e-33 148.3 263 43.0
Thhalv10016920m.g Eutrema salsugineum HOM05D004925 ORTHO05D005643 2.2e-33 147.1 252 42.5
vmacro21158 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 3.8e-33 146.4 350 36.6
Ciclev10032226m.g Citrus clementina HOM05D004925 ORTHO05D005643 1.1e-32 144.8 299 36.8
Sp1g03770 Schrenkiella parvula HOM05D004925 ORTHO05D005643 1.9e-32 144.1 299 40.5
Actinidia21578 Actinidia chinensis HOM05D004925 ORTHO05D005643 2.5e-32 143.7 156 55.1
PSO384G4128 Papaver somniferum HOM05D004925 ORTHO05D005643 2.5e-32 143.7 242 40.9
Glyma.08G148900 Glycine max HOM05D004925 ORTHO05D005643 3.2e-32 143.3 260 40.4
Aqoxy1G00133 Aquilegia oxysepala HOM05D004925 ORTHO05D005643 4.2e-32 142.9 278 40.3
Ca_02951_v3 Cicer arietinum L. HOM05D004925 ORTHO05D005643 9.3e-32 141.7 245 42.9
Phvul.005G039900 Phaseolus vulgaris HOM05D004925 ORTHO05D005643 2.1e-31 140.6 310 37.7
Aa31LG5G4490 Aethionema arabicum HOM05D004925 ORTHO05D005643 3.5e-31 139.8 249 44.6
HanXRQChr11g0341641 Helianthus annuus HOM05D004925 ORTHO05D005643 3.5e-31 139.8 189 46.0
QL04p000066 Quercus lobata HOM05D004925 ORTHO05D005643 6.0e-31 139.0 313 39.0
Sed0010000 Sechium edule HOM05D004925 ORTHO05D005643 6.0e-31 139.0 301 39.9
HanXRQChr11g0341651 Helianthus annuus HOM05D004925 ORTHO05D005643 1.3e-30 137.9 179 48.6
HanXRQChr11g0341871 Helianthus annuus HOM05D004925 ORTHO05D005643 3.0e-30 136.7 135 55.6
Medtr2g060910 Medicago truncatula HOM05D004925 ORTHO05D005643 3.9e-30 136.3 243 41.6
Lj3g0011601 Lotus japonicus HOM05D004925 ORTHO05D005643 6.7e-30 135.6 326 38.7
CDE04G0753 Ceratophyllum demersum HOM05D004925 ORTHO05D005643 8.7e-30 135.2 287 38.7
Lalb_Chr03g0033881 Lupinus albus HOM05D004925 ORTHO05D005643 8.7e-30 135.2 158 51.3
A10p03360 Brassica napus HOM05D004925 ORTHO05D005643 1.5e-29 134.4 257 40.9
Glyma.15G269200 Glycine max HOM05D004925 ORTHO05D005643 3.3e-29 133.3 285 36.1
PGR119G0958 Punica granatum HOM05D004925 ORTHO05D005643 9.6e-29 131.7 254 40.9
C04p16720 Brassica napus HOM05D004925 ORTHO05D005643 1.3e-28 131.3 295 43.1
BolC4t23220H Brassica oleracea HOM05D004925 ORTHO05D005643 1.3e-28 131.3 254 43.7
BraA10t42612Z Brassica rapa HOM05D004925 ORTHO05D005643 6.2e-28 129.0 283 38.9
vmacro21156 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 8.2e-28 128.6 293 35.2
QL04p003160 Quercus lobata HOM05D004925 ORTHO05D005643 2.4e-27 127.1 349 35.5
Thhalv10009447m.g Eutrema salsugineum HOM05D004925 ORTHO05D005643 5.3e-27 125.9 155 51.0
C05p03080 Brassica napus HOM05D004925 ORTHO05D005643 6.9e-27 125.6 160 50.0
TPR.G11699 Trifolium pratense HOM05D004925 ORTHO05D005643 6.9e-27 125.6 140 53.6
A05p12810 Brassica napus HOM05D004925 ORTHO05D005643 1.2e-26 124.8 287 40.8
BcaB01g00977 Brassica carinata HOM05D004925 ORTHO05D005643 1.5e-26 124.4 159 51.6
BraA05t20219Z Brassica rapa HOM05D004925 ORTHO05D005643 2.6e-26 123.6 149 52.3
Prupe.2G004100 Prunus persica HOM05D004925 ORTHO05D005643 4.5e-26 122.9 287 35.5
BcaB02g10501 Brassica carinata HOM05D004925 ORTHO05D005643 1.0e-25 121.7 267 37.5
Lalb_Chr25g0283541 Lupinus albus HOM05D004925 ORTHO05D005643 1.7e-25 120.9 281 36.7
CARHR004330 Cardamine hirsuta HOM05D004925 ORTHO05D005643 2.9e-25 120.2 154 48.7
AUR62015612 Chenopodium quinoa HOM05D004925 ORTHO05D005643 3.8e-25 119.8 162 46.9
PSO339G6120 Papaver somniferum HOM05D004925 ORTHO05D005643 4.9e-25 119.4 243 38.3
BolC5t29090H Brassica oleracea HOM05D004925 ORTHO05D005643 6.5e-25 119.0 152 50.0
THA.LOC104816029 Tarenaya hassleriana HOM05D004925 ORTHO05D005643 1.1e-24 118.2 162 48.1
PGSC0003DMG400006329 Solanum tuberosum HOM05D004925 ORTHO05D005643 3.2e-24 116.7 275 36.0
vmacro21157 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 3.0e-22 110.2 338 30.5
AT1G04930 Arabidopsis thaliana HOM05D004925 ORTHO05D005643 5.1e-22 109.4 261 37.5
Medtr4g125960 Medicago truncatula HOM05D004925 ORTHO05D005643 8.7e-22 108.6 164 44.5
SEGI_38326 Sequoiadendron giganteum HOM05D004925 ORTHO05D005643 8.7e-22 108.6 184 41.8
Lj7A564G31 Lonicera japonica HOM05D004925 ORTHO05D005643 2.8e-20 103.6 102 52.9
Zm00001eb399260 Zea mays HOM05D004925 ORTHO05D005643 3.7e-20 103.2 268 33.2
CDE06G1226 Ceratophyllum demersum HOM05D004925 ORTHO05D005643 1.8e-19 100.9 285 33.7
Rhsim06G0015600 Rhododendron simsii HOM05D004925 ORTHO05D005643 1.2e-18 98.2 302 31.8
EL10Ac8g20283 Beta vulgaris HOM05D004925 ORTHO05D005643 1.5e-18 97.8 202 38.6
Aa31LG1G19930 Aethionema arabicum HOM05D004925 ORTHO05D005643 4.5e-18 96.3 286 34.3
HanXRQChr11g0341671 Helianthus annuus HOM05D004925 ORTHO05D005643 1.3e-17 94.7 179 39.7
Mapoly0040s0118 Marchantia polymorpha HOM05D004925 ORTHO05D005643 7.2e-16 89.0 142 42.3
HPP92_020314 Vanilla planifolia HOM05D004925 ORTHO05D005643 7.2e-16 89.0 150 42.7
AL1G14650 Arabidopsis lyrata HOM05D004925 ORTHO05D005643 7.9e-15 85.5 261 33.7
Sabra16G0137200 Salix brachista HOM05D004925 ORTHO05D005643 5.1e-14 82.8 97 54.6
ATR0598G164 Amborella trichopoda HOM05D004925 ORTHO05D005643 1.1e-13 81.6 280 33.2
CSS0015862 Camellia sinensis var. sinensis HOM05D004925 ORTHO05D005643 1.7e-12 77.8 143 38.5
Oeu013586.1 Olea europaea HOM05D004925 ORTHO05D005643 1.7e-12 77.8 56 60.7
CSS0038538 Camellia sinensis var. sinensis HOM05D004925 ORTHO05D005643 1.4e-11 74.7 76 51.3
Pp3c22_21740 Physcomitrium patens HOM05D004925 ORTHO05D005643 3.1e-11 73.6 170 36.5
Haze_10406 Corylus avellana HOM05D004925 ORTHO05D005643 6.9e-11 72.4 64 56.2
Os03g0234600 Oryza sativa ssp. japonica HOM05D004925 ORTHO05D005643 1.5e-10 71.2 225 31.6
A09p67630 Brassica napus HOM05D004925 ORTHO05D005643 5.9e-10 69.3 108 41.7
SMO137G0159 Selaginella moellendorffii HOM05D004925 ORTHO05D005643 1.7e-09 67.8 191 34.6
BcaB03g16451 Brassica carinata HOM05D004925 ORTHO05D005643 1.2e-07 61.6 86 41.9
BraA09t42096Z Brassica rapa HOM05D000053 ORTHO05D000035 6.1e-07 59.3 82 43.9
BcaB03g16455 Brassica carinata HOM05D004489 ORTHO05D005643 1.0e-06 58.5 84 40.5
BcaB03g16450 Brassica carinata HOM05D000563 ORTHO05D005643 3.0e-06 57.0 137 35.0


User provided reference genes

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