Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G1212 Salvia bowleyana HOM05D005419 ORTHO05D007365 9.9e-169 596.7 292 100.0
MSTRG.26021 Avicennia marina HOM05D005419 ORTHO05D007365 6.9e-154 547.4 289 90.0
Migut.A00016 Erythranthe guttata HOM05D005419 ORTHO05D007365 3.4e-153 545.0 292 89.7
Peaxi162Scf00935g00015 Petunia axillaris HOM05D005419 ORTHO05D007365 7.6e-153 543.9 292 89.0
Cc08_g00340 Coffea canephora HOM05D005419 ORTHO05D007365 2.2e-152 542.3 292 88.4
Nitab4.5_0014723g0010 Nicotiana tabacum HOM05D005419 ORTHO05D007365 4.9e-152 541.2 292 89.4
Sopen08g010000 Solanum pennellii HOM05D005419 ORTHO05D007365 2.4e-151 538.9 292 89.0
Phvul.001G049700 Phaseolus vulgaris HOM05D005419 ORTHO05D007365 4.2e-151 538.1 288 88.2
Solyc08g029110.3 Solanum lycopersicum HOM05D005419 ORTHO05D007365 7.1e-151 537.3 292 89.0
Gorai.010G116600 Gossypium raimondii HOM05D005419 ORTHO05D007365 9.3e-151 537.0 292 88.7
Gohir.D05G058700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 1.2e-150 536.6 292 87.7
Gorai.009G059800 Gossypium raimondii HOM05D005419 ORTHO05D007365 1.2e-150 536.6 292 87.7
Gohir.A06G099500 Gossypium hirsutum HOM05D005419 ORTHO05D007365 2.1e-150 535.8 292 88.4
CiPaw.07G226000 Carya illinoinensis HOM05D005419 ORTHO05D007365 4.6e-150 534.6 292 87.0
Dinv15871 Davidia involucrata HOM05D005419 ORTHO05D007365 4.6e-150 534.6 292 87.3
SGA_v2.0_scaffold20G09092 Striga asiatica HOM05D005419 ORTHO05D007365 7.9e-150 533.9 292 88.7
Duzib150G0083 Durio zibethinus HOM05D005419 ORTHO05D007365 1.0e-149 533.5 292 88.0
DCAR_003104 Daucus carota HOM05D005419 ORTHO05D007365 1.3e-149 533.1 292 86.3
Gohir.D06G101700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 1.3e-149 533.1 292 88.0
QL02p020871 Quercus lobata HOM05D005419 ORTHO05D007365 1.3e-149 533.1 291 86.9
VMungo0647G0032 Vigna mungo HOM05D005419 ORTHO05D007365 1.3e-149 533.1 288 87.5
Cfa013117 Carpinus fangiana HOM05D005419 ORTHO05D007365 3.0e-149 531.9 292 86.3
Glyma.14G113800 Glycine max HOM05D005419 ORTHO05D007365 3.0e-149 531.9 288 87.2
Sed0010362 Sechium edule HOM05D005419 ORTHO05D007365 3.9e-149 531.6 292 86.3
CSS0019044 Camellia sinensis var. sinensis HOM05D005419 ORTHO05D007365 5.1e-149 531.2 292 86.6
Hma1.2p1_0974F.1_g243070 Hydrangea macrophylla HOM05D005419 ORTHO05D007365 5.1e-149 531.2 292 86.3
unitig_32.g10881 Utricularia gibba HOM05D005419 ORTHO05D007365 1.5e-148 529.6 290 85.9
Manes.16G125000 Manihot esculenta HOM05D005419 ORTHO05D007365 2.5e-148 528.9 292 86.0
Atru.chr7.2482 Acer truncatum HOM05D005419 ORTHO05D007365 4.3e-148 528.1 290 85.9
TWI34G1484 Tripterygium wilfordii HOM05D005419 ORTHO05D007365 4.3e-148 528.1 292 85.6
Lj5g0012746 Lotus japonicus HOM05D005419 ORTHO05D007365 5.6e-148 527.7 288 86.5
Ciclev10009082m.g Citrus clementina HOM05D005419 ORTHO05D007365 1.3e-147 526.6 292 86.0
Medtr1g012830 Medicago truncatula HOM05D005419 ORTHO05D007365 1.3e-147 526.6 288 85.8
GSVIVG01035939001 Vitis vinifera HOM05D005419 ORTHO05D007365 1.3e-147 526.6 292 86.3
PGR119G2552 Punica granatum HOM05D005419 ORTHO05D007365 1.6e-147 526.2 292 86.0
TPR.G14021 Trifolium pratense HOM05D005419 ORTHO05D007365 2.1e-147 525.8 288 85.8
Eucgr.K02838 Eucalyptus grandis HOM05D005419 ORTHO05D007365 4.8e-147 524.6 292 84.9
TAR383G1021 Trochodendron aralioides HOM05D005419 ORTHO05D007365 4.8e-147 524.6 290 85.9
ECA248G3461 Erigeron canadensis HOM05D005419 ORTHO05D007365 6.2e-147 524.2 290 85.5
Potri.018G023700 Populus trichocarpa HOM05D005419 ORTHO05D007365 6.2e-147 524.2 292 86.3
Lalb_Chr23g0268401 Lupinus albus HOM05D005419 ORTHO05D007365 8.1e-147 523.9 290 86.6
CsaV3_2G032220 Cucumis sativus L. HOM05D005419 ORTHO05D007365 1.1e-146 523.5 292 85.6
Nitab4.5_0007718g0040 Nicotiana tabacum HOM05D005419 ORTHO05D007365 1.1e-146 523.5 292 87.3
Thecc.09G020800 Theobroma cacao HOM05D005419 ORTHO05D007365 1.4e-146 523.1 294 86.7
Ca_13036_v3 Cicer arietinum L. HOM05D005419 ORTHO05D007365 1.8e-146 522.7 288 85.1
HanXRQChr13g0387991 Helianthus annuus HOM05D005419 ORTHO05D007365 4.0e-146 521.5 290 85.2
MD15G1129200 Malus domestica HOM05D005419 ORTHO05D007365 4.0e-146 521.5 292 84.6
EL10Ac2g04167 Beta vulgaris HOM05D005419 ORTHO05D007365 6.9e-146 520.8 292 85.3
Psat6g028000 Pisum sativum HOM05D005419 ORTHO05D007365 9.0e-146 520.4 288 85.1
RcHm_v2.0_Chr6g0297381 Rosa chinensis HOM05D005419 ORTHO05D007365 9.0e-146 520.4 292 84.2
arahy.Tifrunner.gnm1.ann1.2DG9CD Arachis hypogaea HOM05D005419 ORTHO05D007365 2.6e-145 518.8 287 86.1
arahy.Tifrunner.gnm1.ann1.X3TF0E Arachis hypogaea HOM05D005419 ORTHO05D007365 2.6e-145 518.8 287 86.1
Nn2g12192 Nelumbo nucifera HOM05D005419 ORTHO05D007365 4.5e-145 518.1 292 84.2
MELO3C011274.2 Cucumis melo HOM05D005419 ORTHO05D007365 1.3e-144 516.5 292 84.9
Lj8A726G39 Lonicera japonica HOM05D005419 ORTHO05D007365 1.3e-144 516.5 290 84.1
Aqoxy7G03594 Aquilegia oxysepala HOM05D005419 ORTHO05D007365 4.9e-144 514.6 292 83.6
CANSAT25G3306 Cannabis sativa HOM05D005419 ORTHO05D007365 4.9e-144 514.6 289 84.1
FvH4_2g28610 Fragaria vesca HOM05D005419 ORTHO05D007365 6.4e-144 514.2 292 84.2
FAN24G2053 Fragaria x ananassa HOM05D005419 ORTHO05D007365 6.4e-144 514.2 292 84.2
Sc09g0010330 Simmondsia chinensis HOM05D005419 ORTHO05D007365 8.4e-144 513.8 284 86.3
AUR62031558 Chenopodium quinoa HOM05D005419 ORTHO05D007365 1.4e-143 513.1 290 84.8
AUR62012434 Chenopodium quinoa HOM05D005419 ORTHO05D007365 2.4e-143 512.3 289 84.4
Haze_21481 Corylus avellana HOM05D005419 ORTHO05D007365 2.4e-143 512.3 321 77.3
MD08G1152600 Malus domestica HOM05D005419 ORTHO05D007365 2.4e-143 512.3 292 83.6
FAN20G2331 Fragaria x ananassa HOM05D005419 ORTHO05D007365 4.2e-143 511.5 292 83.6
Actinidia14096 Actinidia chinensis HOM05D005419 ORTHO05D007365 2.1e-142 509.2 280 85.7
BcaB06g28051 Brassica carinata HOM05D005419 ORTHO05D007365 3.0e-141 505.4 292 82.2
A04p19650 Brassica napus HOM05D005419 ORTHO05D007365 3.3e-140 501.9 292 81.5
BraA04t17556Z Brassica rapa HOM05D005419 ORTHO05D007365 3.3e-140 501.9 292 81.5
Potri.006G258200 Populus trichocarpa HOM05D005419 ORTHO05D007365 5.6e-140 501.1 292 82.9
Sp4g04430 Schrenkiella parvula HOM05D005419 ORTHO05D007365 9.6e-140 500.4 292 81.2
FAN27G2423 Fragaria x ananassa HOM05D005419 ORTHO05D007365 1.6e-139 499.6 292 82.9
Cpa.g.sc187.13 Carica papaya HOM05D005419 ORTHO05D007365 2.8e-139 498.8 290 82.4
THA.LOC104805589 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 2.8e-139 498.8 292 81.5
BolC4t27063H Brassica oleracea HOM05D005419 ORTHO05D007365 3.7e-139 498.4 292 80.8
C04p55260 Brassica napus HOM05D005419 ORTHO05D007365 8.1e-139 497.3 292 80.5
Carub.0004s0490 Capsella rubella HOM05D005419 ORTHO05D007365 8.1e-139 497.3 290 81.0
Thhalv10000272m.g Eutrema salsugineum HOM05D005419 ORTHO05D007365 1.8e-138 496.1 292 80.1
AL4G16610 Arabidopsis lyrata HOM05D005419 ORTHO05D007365 4.0e-138 495.0 292 80.1
BcaC02g08359 Brassica carinata HOM05D005419 ORTHO05D007365 5.3e-138 494.6 292 79.8
PSO210G4598 Papaver somniferum HOM05D005419 ORTHO05D007365 9.0e-138 493.8 293 80.5
AT2G25280 Arabidopsis thaliana HOM05D005419 ORTHO05D007365 1.2e-137 493.4 292 80.1
CDE03G0272 Ceratophyllum demersum HOM05D005419 ORTHO05D007365 2.6e-137 492.3 291 79.0
vmacro05161 Vaccinium macrocarpon HOM05D005419 ORTHO05D007365 2.6e-137 492.3 272 86.8
BcaB08g35172 Brassica carinata HOM05D005419 ORTHO05D007365 3.4e-137 491.9 292 79.8
Os08g0299000 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D007365 7.6e-137 490.7 290 79.0
Aa31sc229G10 Aethionema arabicum HOM05D005419 ORTHO05D007365 1.7e-136 489.6 292 79.5
THA.LOC104815027 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 4.9e-136 488.0 287 82.2
HPP92_000481 Vanilla planifolia HOM05D005419 ORTHO05D007365 8.4e-136 487.3 291 78.7
A09p55730 Brassica napus HOM05D005419 ORTHO05D007365 1.1e-135 486.9 292 78.8
BraA09t40974Z Brassica rapa HOM05D005419 ORTHO05D007365 1.1e-135 486.9 292 78.8
C08p38730 Brassica napus HOM05D005419 ORTHO05D007365 1.9e-135 486.1 292 78.8
BolC8t51443H Brassica oleracea HOM05D005419 ORTHO05D007365 1.9e-135 486.1 292 78.8
Lsat_1_v5_gn_5_157921 Lactuca sativa HOM05D005419 ORTHO05D007365 4.2e-135 485.0 288 81.2
CANSAT54G2335 Cannabis sativa HOM05D005419 ORTHO05D007365 5.5e-135 484.6 289 78.5
BcaC07g40875 Brassica carinata HOM05D005419 ORTHO05D007365 9.3e-135 483.8 287 79.4
MBI15_g25765_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 9.3e-135 483.8 290 79.0
Prupe.1G484800 Prunus persica HOM05D005419 ORTHO05D007365 1.6e-134 483.0 274 84.7
Duzib168G1909 Durio zibethinus HOM05D005419 ORTHO05D007365 6.0e-134 481.1 292 80.8
Rhsim12G0212900 Rhododendron simsii HOM05D005419 ORTHO05D007365 6.7e-133 477.6 292 80.5
Zm00001eb362830 Zea mays HOM05D005419 ORTHO05D007365 6.7e-133 477.6 289 79.6
COL.COLO4_18897 Corchorus olitorius HOM05D005419 ORTHO05D007365 1.5e-132 476.5 255 87.8
FAN15G2739 Fragaria x ananassa HOM05D005419 ORTHO05D007365 4.3e-132 474.9 278 82.0
Sabra18G0026400 Salix brachista HOM05D005419 ORTHO05D007365 4.8e-131 471.5 273 83.2
ATR0767G069 Amborella trichopoda HOM05D005419 ORTHO05D007365 1.8e-130 469.5 272 83.1
Sed0006243 Sechium edule HOM05D005419 ORTHO05D007365 9.0e-130 467.2 289 76.1
ClCG08G013470 Citrullus lanatus HOM05D005419 ORTHO05D007365 1.5e-129 466.5 313 75.1
CARHR116260 Cardamine hirsuta HOM05D005419 ORTHO05D007365 2.6e-129 465.7 294 75.5
Dinv18189 Davidia involucrata HOM05D005419 ORTHO05D007365 3.9e-125 451.8 292 76.7
Hund04483 Selenicereus undatus HOM05D005419 ORTHO05D007365 6.3e-123 444.5 308 71.1
Mapoly0065s0048 Marchantia polymorpha HOM05D005419 ORTHO05D007365 1.8e-122 443.0 287 72.5
SMO358G0334 Selaginella moellendorffii HOM05D005419 ORTHO05D007365 2.9e-120 435.6 288 71.2
MBI15_g36826_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 7.2e-119 431.0 271 77.5
Pp3c14_17280 Physcomitrium patens HOM05D005419 ORTHO05D007365 1.0e-117 427.2 281 70.1
Pp3c2_14390 Physcomitrium patens HOM05D005419 ORTHO05D007365 9.7e-116 420.6 267 73.8
SEGI_34683 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 5.5e-111 404.8 273 69.2
CBR_g59364 Chara braunii HOM05D005419 ORTHO05D007365 3.3e-108 395.6 281 64.8
SEGI_02513 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 1.9e-103 379.8 223 81.6
Rhsim07G0160700 Rhododendron simsii HOM05D005419 ORTHO05D007365 1.4e-98 363.6 321 61.1
Oeu012280.1 Olea europaea HOM05D005419 ORTHO05D007365 1.2e-92 344.0 186 89.2
CAN.G75.9 Capsicum annuum HOM05D005419 ORTHO05D007365 7.7e-89 331.3 186 87.1
Cre02.g096200 Chlamydomonas reinhardtii HOM05D005419 ORTHO05D007365 2.1e-86 323.2 289 53.3
THA.LOC104815144 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 2.0e-84 316.6 181 85.1
PRCOL_00000176 Prasinoderma coloniale HOM05D005419 ORTHO05D007365 2.8e-83 312.8 294 54.1
MCO07G667 Micromonas commoda HOM05D005419 ORTHO05D007365 1.6e-81 307.0 297 54.2
AagrBONN_evm.TU.Sc2ySwM_368.1912 Anthoceros agrestis HOM05D005419 ORTHO05D007365 3.5e-81 305.8 188 76.1
Sabra06G0201900 Salix brachista HOM05D005419 ORTHO05D007365 4.7e-78 295.4 173 82.1
Haze_26290 Corylus avellana HOM05D005419 ORTHO05D007365 2.5e-71 273.1 293 46.1
Cfa026845 Carpinus fangiana HOM05D005419 ORTHO05D007365 1.9e-58 230.3 310 44.8
Lalb_Chr11g0063641 Lupinus albus HOM05D005419 ORTHO05D007365 7.1e-58 228.4 164 69.5
FAN09G2129 Fragaria x ananassa HOM05D005419 ORTHO05D019206 8.9e-53 211.5 224 53.1
FAN28G2535 Fragaria x ananassa HOM05D005419 ORTHO05D019206 3.8e-51 206.1 224 52.2
Oeu012278.1 Olea europaea HOM05D005419 ORTHO05D007365 3.9e-48 196.1 106 84.9
FAN01G2683 Fragaria x ananassa HOM05D005419 ORTHO05D019206 4.2e-42 176.0 101 84.2
FAN02G2313 Fragaria x ananassa HOM05D005419 ORTHO05D019206 7.1e-42 175.3 102 82.4
FAN21G3387 Fragaria x ananassa HOM05D005419 ORTHO05D019206 3.3e-39 166.4 96 83.3
Os05g0310750 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D019206 5.8e-28 129.0 76 82.9
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 1.5e-23 114.4 164 41.5
FAN16G2296 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.1e-21 108.2 96 61.5
MBI12_g19406_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D242193 3.6e-09 66.6 51 60.8
Prupe.1G567700 Prunus persica HOM05D005419 ORTHO05D019206 1.9e-07 60.8 40 77.5


User provided reference genes

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