Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G1191 Salvia bowleyana HOM05D005463 ORTHO05D006900 5.0e-185 651.0 330 100.0
Migut.B01346 Erythranthe guttata HOM05D005463 ORTHO05D006900 1.5e-149 533.1 322 84.2
Solyc01g086650.3 Solanum lycopersicum HOM05D005463 ORTHO05D006900 4.1e-139 498.4 322 79.8
Sopen01g033670 Solanum pennellii HOM05D005463 ORTHO05D006900 4.1e-139 498.4 322 79.8
PGSC0003DMG400025254 Solanum tuberosum HOM05D005463 ORTHO05D006900 1.2e-138 496.9 322 79.8
Oeu047540.1 Olea europaea HOM05D005463 ORTHO05D006900 1.3e-137 493.4 313 80.5
CAN.G1393.12 Capsicum annuum HOM05D005463 ORTHO05D006900 1.1e-136 490.3 322 78.0
Nitab4.5_0006866g0010 Nicotiana tabacum HOM05D005463 ORTHO05D006900 3.3e-136 488.8 320 76.9
SGA_v2.0_scaffold4G02241 Striga asiatica HOM05D005463 ORTHO05D006900 7.3e-136 487.6 327 79.5
Cc02_g27320 Coffea canephora HOM05D005463 ORTHO05D006900 1.1e-134 483.8 324 78.1
CSS0012415 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 1.4e-134 483.4 324 79.0
MELO3C023520.2 Cucumis melo HOM05D005463 ORTHO05D006900 1.8e-134 483.0 325 78.2
Nitab4.5_0002239g0050 Nicotiana tabacum HOM05D005463 ORTHO05D006900 5.2e-134 481.5 323 77.7
CSS0041052 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 6.8e-134 481.1 324 78.7
CsaV3_7G031380 Cucumis sativus L. HOM05D005463 ORTHO05D006900 2.6e-133 479.2 325 77.2
ClCG09G003850 Citrullus lanatus HOM05D005463 ORTHO05D006900 7.5e-133 477.6 325 76.6
Dinv43914 Davidia involucrata HOM05D005463 ORTHO05D006900 8.3e-132 474.2 280 84.3
DCAR_006305 Daucus carota HOM05D005463 ORTHO05D006900 4.1e-131 471.9 325 76.6
TAR369G0415 Trochodendron aralioides HOM05D005463 ORTHO05D006900 5.4e-131 471.5 324 75.6
SGA_v2.0_scaffold95G28785 Striga asiatica HOM05D005463 ORTHO05D006900 7.1e-131 471.1 360 71.7
TWI74G0716 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 3.5e-130 468.8 325 76.3
TAR623G0821 Trochodendron aralioides HOM05D005463 ORTHO05D006900 1.0e-129 467.2 324 74.7
Potri.001G226900 Populus trichocarpa HOM05D005463 ORTHO05D006900 1.3e-129 466.8 326 74.5
PSO541G2837 Papaver somniferum HOM05D005463 ORTHO05D006900 1.7e-129 466.5 296 80.7
QL04p003263 Quercus lobata HOM05D005463 ORTHO05D006900 1.7e-129 466.5 325 75.7
Nn7g36051 Nelumbo nucifera HOM05D005463 ORTHO05D006900 2.3e-129 466.1 315 77.5
Ciclev10031826m.g Citrus clementina HOM05D005463 ORTHO05D006900 3.9e-129 465.3 335 75.8
Peaxi162Scf00058g00512 Petunia axillaris HOM05D005463 ORTHO05D006900 3.9e-129 465.3 314 78.3
Manes.10G148700 Manihot esculenta HOM05D005463 ORTHO05D006900 1.9e-128 463.0 296 80.4
Lsat_1_v5_gn_4_46300 Lactuca sativa HOM05D005463 ORTHO05D006900 5.6e-128 461.5 326 75.5
MBI19_g42082_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 5.6e-128 461.5 316 77.5
Manes.07G002600 Manihot esculenta HOM05D005463 ORTHO05D006900 5.6e-128 461.5 289 82.0
RcHm_v2.0_Chr1g0314251 Rosa chinensis HOM05D005463 ORTHO05D006900 5.6e-128 461.5 329 73.3
Lj7A567T29 Lonicera japonica HOM05D005463 ORTHO05D006900 7.3e-128 461.1 325 76.0
MBI07_g21780_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 2.8e-127 459.1 316 77.2
Thecc.01G415300 Theobroma cacao HOM05D005463 ORTHO05D006900 3.6e-127 458.8 311 76.8
TWI77G0271 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 3.6e-127 458.8 327 74.6
Haze_03251 Corylus avellana HOM05D005463 ORTHO05D006900 6.2e-127 458.0 323 73.1
Sabra16G0135300 Salix brachista HOM05D005463 ORTHO05D006900 6.2e-127 458.0 326 73.6
Sp7g01080 Schrenkiella parvula HOM05D005463 ORTHO05D006900 1.1e-126 457.2 322 74.8
Cfa010722 Carpinus fangiana HOM05D005463 ORTHO05D006900 1.4e-126 456.8 323 72.4
BcaB02g07924 Brassica carinata HOM05D005463 ORTHO05D006900 1.8e-126 456.4 304 78.3
Prupe.2G005900 Prunus persica HOM05D005463 ORTHO05D006900 1.8e-126 456.4 318 75.5
BcaC02g08999 Brassica carinata HOM05D005463 ORTHO05D006900 3.1e-126 455.7 321 75.4
BolC4t26367H Brassica oleracea HOM05D005463 ORTHO05D006900 3.1e-126 455.7 321 75.4
THA.LOC104819056 Tarenaya hassleriana HOM05D005463 ORTHO05D006900 3.1e-126 455.7 337 73.6
CiPaw.13G001800 Carya illinoinensis HOM05D005463 ORTHO05D006900 5.2e-126 454.9 324 73.8
A04p13900 Brassica napus HOM05D005463 ORTHO05D006900 1.5e-125 453.4 325 74.8
BraA04t17055Z Brassica rapa HOM05D005463 ORTHO05D006900 1.5e-125 453.4 325 74.8
Thhalv10027799m.g Eutrema salsugineum HOM05D005463 ORTHO05D006900 1.5e-125 453.4 325 73.8
RcHm_v2.0_Chr6g0277781 Rosa chinensis HOM05D005463 ORTHO05D006900 1.5e-125 453.4 325 73.5
BcaB06g27564 Brassica carinata HOM05D005463 ORTHO05D006900 3.4e-125 452.2 324 74.7
Lalb_Chr25g0283441 Lupinus albus HOM05D005463 ORTHO05D006900 3.4e-125 452.2 329 73.3
C04p47660 Brassica napus HOM05D005463 ORTHO05D006900 4.4e-125 451.8 324 74.7
COL.COLO4_23908 Corchorus olitorius HOM05D000259 ORTHO05D000155 4.4e-125 451.8 305 76.4
Rhsim07G0052500 Rhododendron simsii HOM05D005463 ORTHO05D006900 5.8e-125 451.4 315 78.1
Sed0008391 Sechium edule HOM05D005463 ORTHO05D006900 5.8e-125 451.4 314 76.1
MD07G1002800 Malus domestica HOM05D005463 ORTHO05D006900 7.6e-125 451.1 337 72.7
FvH4_7g00480 Fragaria vesca HOM05D005463 ORTHO05D006900 9.9e-125 450.7 331 72.2
FAN06G3192 Fragaria x ananassa HOM05D005463 ORTHO05D006900 9.9e-125 450.7 331 72.2
Gohir.D10G064800 Gossypium hirsutum HOM05D005463 ORTHO05D006900 1.3e-124 450.3 309 74.8
Glyma.08G150800 Glycine max HOM05D005463 ORTHO05D006900 1.7e-124 449.9 323 75.5
Eucgr.H00541 Eucalyptus grandis HOM05D005463 ORTHO05D006900 2.9e-124 449.1 294 77.9
AL7G48760 Arabidopsis lyrata HOM05D005463 ORTHO05D006900 4.9e-124 448.4 327 75.2
FAN03G0244 Fragaria x ananassa HOM05D005463 ORTHO05D006900 4.9e-124 448.4 327 72.2
FAN10G2111 Fragaria x ananassa HOM05D005463 ORTHO05D006900 8.4e-124 447.6 331 71.9
PGR083G1038 Punica granatum HOM05D005463 ORTHO05D006900 8.4e-124 447.6 286 81.5
vmacro13633 Vaccinium macrocarpon HOM05D005463 ORTHO05D006900 8.4e-124 447.6 325 74.2
Glyma.15G270200 Glycine max HOM05D005463 ORTHO05D006900 1.1e-123 447.2 322 75.2
AT5G40850 Arabidopsis thaliana HOM05D005463 ORTHO05D006900 1.4e-123 446.8 325 74.2
Duzib114G0804 Durio zibethinus HOM05D005463 ORTHO05D006900 1.4e-123 446.8 295 77.3
Actinidia32326 Actinidia chinensis HOM05D005463 ORTHO05D006900 2.4e-123 446.0 279 82.1
Lj3g0018047 Lotus japonicus HOM05D005463 ORTHO05D006900 3.2e-123 445.7 296 78.0
Carub.0007s3465 Capsella rubella HOM05D005463 ORTHO05D006900 4.2e-123 445.3 325 75.4
Aqoxy2G00060 Aquilegia oxysepala HOM05D005463 ORTHO05D006900 7.1e-123 444.5 334 71.9
Psat5g207280 Pisum sativum HOM05D005463 ORTHO05D006900 7.1e-123 444.5 321 74.1
arahy.Tifrunner.gnm1.ann1.35ND81 Arachis hypogaea HOM05D005463 ORTHO05D006900 9.2e-123 444.1 315 75.2
CANSAT11G2548 Cannabis sativa HOM05D005463 ORTHO05D006900 9.2e-123 444.1 337 70.6
CARHR213670 Cardamine hirsuta HOM05D005463 ORTHO05D006900 2.1e-122 443.0 281 81.5
Gorai.011G068800 Gossypium raimondii HOM05D005463 ORTHO05D006900 2.1e-122 443.0 309 74.1
Ca_22203_v3 Cicer arietinum L. HOM05D005463 ORTHO05D006900 1.3e-121 440.3 325 72.6
Medtr7g034345 Medicago truncatula HOM05D005463 ORTHO05D006900 1.7e-121 439.9 324 72.2
HanXRQChr16g0520501 Helianthus annuus HOM05D005463 ORTHO05D006900 2.3e-121 439.5 323 72.1
Phvul.005G038200 Phaseolus vulgaris HOM05D005463 ORTHO05D006900 3.9e-121 438.7 325 75.4
Aa31sc48G90 Aethionema arabicum HOM05D005463 ORTHO05D006900 5.1e-121 438.3 309 75.7
CDE09G0814 Ceratophyllum demersum HOM05D005463 ORTHO05D006900 1.1e-120 437.2 328 71.0
VMungo1080G0018 Vigna mungo HOM05D005463 ORTHO05D006900 1.9e-120 436.4 325 75.1
Ah.05g166840 Amaranthus hybridus HOM05D005463 ORTHO05D006900 3.6e-119 432.2 314 72.9
TPR.G12169 Trifolium pratense HOM05D005463 ORTHO05D006900 8.1e-119 431.0 322 72.7
Hund11459 Selenicereus undatus HOM05D005463 ORTHO05D006900 3.1e-118 429.1 303 74.3
EL10Ac1g02324 Beta vulgaris HOM05D005463 ORTHO05D006900 1.5e-117 426.8 346 67.1
Sc20g0006350 Simmondsia chinensis HOM05D005463 ORTHO05D006900 2.6e-117 426.0 335 68.4
MBI19_g47932_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 7.6e-117 424.5 317 73.8
ECA234G3252 Erigeron canadensis HOM05D005463 ORTHO05D006900 9.9e-117 424.1 323 71.2
AUR62035771 Chenopodium quinoa HOM05D005463 ORTHO05D006900 2.9e-116 422.5 299 73.2
ATR0709G016 Amborella trichopoda HOM05D005463 ORTHO05D006900 3.8e-116 422.2 286 74.1
AUR62034961 Chenopodium quinoa HOM05D005463 ORTHO05D006900 6.4e-116 421.4 301 72.8
Duzib138G0896 Durio zibethinus HOM05D005463 ORTHO05D006900 7.1e-115 417.9 319 70.2
Zm00001eb159150 Zea mays HOM05D005463 ORTHO05D006900 1.2e-109 400.6 292 72.9
GSVIVG01032030001 Vitis vinifera HOM05D005463 ORTHO05D006900 5.4e-107 391.7 230 86.1
Medtr3g026780 Medicago truncatula HOM05D005463 ORTHO05D006900 3.9e-105 385.6 233 84.5
Zm00001eb358930 Zea mays HOM05D005463 ORTHO05D006900 3.7e-103 379.0 295 69.2
Mapoly0087s0054 Marchantia polymorpha HOM05D005463 ORTHO05D006900 1.2e-101 374.0 278 69.8
HPP92_020287 Vanilla planifolia HOM05D005463 ORTHO05D006900 2.5e-99 366.3 247 76.5
Pp3c10_8730 Physcomitrium patens HOM05D005463 ORTHO05D006900 3.2e-99 365.9 241 73.9
unitig_61.g26444 Utricularia gibba HOM05D005463 ORTHO05D006900 3.9e-97 359.0 270 70.7
Cpa.g.sc1133.2 Carica papaya HOM05D005463 ORTHO05D006900 1.6e-95 353.6 309 64.1
SMO174G0240 Selaginella moellendorffii HOM05D005463 ORTHO05D006900 2.1e-95 353.2 289 65.1
CBR_g4488 Chara braunii HOM05D005463 ORTHO05D006900 3.4e-93 345.9 248 67.3
ATR1100G030 Amborella trichopoda HOM05D005463 ORTHO05D006900 1.4e-91 340.5 262 67.6
Cre09.g396401 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D006900 2.6e-77 293.1 247 61.1
Os01g0631200 Oryza sativa ssp. japonica HOM05D005463 ORTHO05D006900 5.0e-76 288.9 160 89.4
Gohir.A10G063300 Gossypium hirsutum HOM05D005463 ORTHO05D006900 7.9e-74 281.6 221 67.4
MBI10_g23170_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 5.1e-73 278.9 177 83.1
PRCOL_00005728 Prasinoderma coloniale HOM05D005463 ORTHO05D006900 8.2e-71 271.6 221 60.2
SEGI_24059 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 2.4e-70 270.0 186 72.6
MCO12G109 Micromonas commoda HOM05D005463 ORTHO05D006900 4.5e-69 265.8 224 59.4
Dinv43913 Davidia involucrata HOM05D005463 ORTHO05D006900 2.2e-68 263.5 204 69.1
MSTRG.17019 Avicennia marina HOM05D005463 ORTHO05D006900 3.3e-64 249.6 177 71.8
Oeu010361.1 Olea europaea HOM05D005463 ORTHO05D006900 7.4e-64 248.4 171 73.7
MSTRG.17060 Avicennia marina HOM05D005463 ORTHO05D006900 1.8e-62 243.8 177 70.1
TPR.G33976 Trifolium pratense HOM05D005463 ORTHO05D006900 4.1e-62 242.7 230 60.0
Hma1.2p1_1089F.1_g255720 Hydrangea macrophylla HOM05D005463 ORTHO05D006900 2.9e-52 209.9 164 67.1
AagrBONN_evm.TU.Sc2ySwM_344.3224 Anthoceros agrestis HOM05D005463 ORTHO05D006900 1.1e-51 208.0 238 51.3
arahy.Tifrunner.gnm1.ann1.UWT5DF Arachis hypogaea HOM05D005463 ORTHO05D006900 8.0e-50 201.8 110 91.8
Prupe.I005100 Prunus persica HOM05D005463 ORTHO05D006900 4.0e-49 199.5 116 86.2
RcHm_v2.0_Chr4g0408791 Rosa chinensis HOM05D005463 ORTHO05D006900 2.0e-45 187.2 109 86.2
RcHm_v2.0_Chr6g0260851 Rosa chinensis HOM05D005463 ORTHO05D006900 5.9e-45 185.7 134 74.6
Cfa024173 Carpinus fangiana HOM05D005463 ORTHO05D006900 8.3e-31 138.7 215 40.0
Cre12.g538650 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D044100 1.1e-25 121.7 207 36.7
SEGI_02284 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 1.9e-22 110.9 74 71.6
Haze_27481 Corylus avellana HOM05D005463 ORTHO05D006900 3.2e-22 110.2 124 46.0
CAN.G762.7 Capsicum annuum HOM05D005463 ORTHO05D006900 4.1e-22 109.8 75 73.3
MCO11G851 Micromonas commoda HOM05D005463 ORTHO05D044100 1.1e-19 101.7 201 33.8
CAN.G244.9 Capsicum annuum HOM05D005463 ORTHO05D006900 2.5e-19 100.5 83 59.0
RcHm_v2.0_Chr1g0375041 Rosa chinensis HOM05D005463 ORTHO05D006900 1.2e-18 98.2 50 94.0
ATR0709G040 Amborella trichopoda HOM05D005463 ORTHO05D006900 9.9e-16 88.6 65 67.7
Nn3g19661 Nelumbo nucifera HOM05D005463 ORTHO05D006900 6.4e-15 85.9 93 54.8
RcHm_v2.0_Chr4g0408811 Rosa chinensis HOM05D005463 ORTHO05D006900 3.5e-13 80.1 110 48.2


User provided reference genes

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