Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G1029 Salvia bowleyana HOM05D007386 ORTHO05D009210 1.4e-88 329.7 176 100.0
Oeu059791.1 Olea europaea HOM05D007386 ORTHO05D009210 5.6e-50 201.4 180 62.8
MSTRG.21545 Avicennia marina HOM05D007386 ORTHO05D009210 1.2e-49 200.3 181 65.7
Rhsim13G0027600 Rhododendron simsii HOM05D007386 ORTHO05D009210 7.5e-47 191.0 187 59.4
Sc05g0001200 Simmondsia chinensis HOM05D007386 ORTHO05D009210 1.7e-46 189.9 176 59.7
Actinidia00789 Actinidia chinensis HOM05D007386 ORTHO05D009210 1.4e-45 186.8 184 57.6
PGR044G1958 Punica granatum HOM05D007386 ORTHO05D009210 3.2e-45 185.7 178 62.9
Duzib168G0678 Durio zibethinus HOM05D007386 ORTHO05D009210 5.4e-45 184.9 176 60.2
HanXRQChr10g0282251 Helianthus annuus HOM05D007386 ORTHO05D009210 1.2e-44 183.7 176 59.1
TWI18G1441 Tripterygium wilfordii HOM05D007386 ORTHO05D009210 1.6e-44 183.3 176 63.1
ECA247G1531 Erigeron canadensis HOM05D007386 ORTHO05D009210 7.8e-44 181.0 178 60.1
Nn6g34127 Nelumbo nucifera HOM05D007386 ORTHO05D009210 1.9e-42 176.4 181 60.2
GSVIVG01001191001 Vitis vinifera HOM05D007386 ORTHO05D009210 2.5e-42 176.0 130 72.3
CSS0002766 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 9.5e-42 174.1 176 55.1
Manes.05G078600 Manihot esculenta HOM05D007386 ORTHO05D009210 9.5e-42 174.1 184 55.4
Medtr1g071630 Medicago truncatula HOM05D007386 ORTHO05D009210 9.5e-42 174.1 176 59.1
CSS0036584 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 2.1e-41 172.9 183 53.0
TAR636G2514 Trochodendron aralioides HOM05D007386 ORTHO05D009210 2.8e-41 172.6 185 57.8
DCAR_018437 Daucus carota HOM05D007386 ORTHO05D009210 3.6e-41 172.2 179 60.3
Eucgr.K03341 Eucalyptus grandis HOM05D007386 ORTHO05D009210 1.1e-40 170.6 176 56.8
Prupe.8G236700 Prunus persica HOM05D007386 ORTHO05D009210 1.1e-40 170.6 188 54.8
VMungo0720G1463 Vigna mungo HOM05D007386 ORTHO05D009210 1.4e-40 170.2 177 58.2
EL10Ac3g07280 Beta vulgaris HOM05D007386 ORTHO05D009210 3.1e-40 169.1 174 60.9
AUR62018389 Chenopodium quinoa HOM05D000027 ORTHO05D000066 3.1e-40 169.1 174 60.3
vmacro02599 Vaccinium macrocarpon HOM05D007386 ORTHO05D009210 5.2e-40 168.3 187 51.3
Gohir.D08G093000 Gossypium hirsutum HOM05D007386 ORTHO05D009210 8.9e-40 167.5 180 54.4
Gorai.004G098600 Gossypium raimondii HOM05D007386 ORTHO05D009210 8.9e-40 167.5 180 54.4
TPR.G25681 Trifolium pratense HOM05D007386 ORTHO05D009210 8.9e-40 167.5 178 55.1
Cpa.g.sc95.34 Carica papaya HOM05D007386 ORTHO05D009210 1.5e-39 166.8 178 55.6
Ca_09739_v3 Cicer arietinum L. HOM05D007386 ORTHO05D009210 1.5e-39 166.8 176 55.7
Glyma.02G145500 Glycine max HOM05D007386 ORTHO05D009210 1.5e-39 166.8 177 55.4
Psat6g059880 Pisum sativum HOM05D007386 ORTHO05D009210 3.4e-39 165.6 119 71.4
Ah.04g150680 Amaranthus hybridus HOM05D007386 ORTHO05D009210 7.5e-39 164.5 175 58.3
AUR62030273 Chenopodium quinoa HOM05D007386 ORTHO05D009210 7.5e-39 164.5 174 58.6
Phvul.007G173800 Phaseolus vulgaris HOM05D007386 ORTHO05D009210 7.5e-39 164.5 177 55.9
QL12p020752 Quercus lobata HOM05D007386 ORTHO05D009210 9.9e-39 164.1 179 55.9
Cfa006177 Carpinus fangiana HOM05D007386 ORTHO05D009210 1.7e-38 163.3 185 56.2
CANSAT78G1636 Cannabis sativa HOM05D007386 ORTHO05D009210 3.7e-38 162.2 186 54.8
Haze_04670 Corylus avellana HOM05D007386 ORTHO05D009210 2.4e-37 159.5 127 67.7
MBI11_g22999_MAGBIO Magnolia biondii HOM05D007386 ORTHO05D009210 3.2e-37 159.1 131 68.7
Lalb_Chr06g0162851 Lupinus albus HOM05D007386 ORTHO05D009210 1.2e-36 157.1 176 52.8
CDE06G2441 Ceratophyllum demersum HOM05D007386 ORTHO05D009210 2.1e-36 156.4 143 59.4
arahy.Tifrunner.gnm1.ann1.ZF8TUR Arachis hypogaea HOM05D007386 ORTHO05D009210 2.7e-36 156.0 176 52.8
Glyma.10G028600 Glycine max HOM05D007386 ORTHO05D009210 2.7e-36 156.0 176 55.1
Lsat_1_v5_gn_9_6101 Lactuca sativa HOM05D007386 ORTHO05D009210 3.5e-36 155.6 132 63.6
CiPaw.07G088700 Carya illinoinensis HOM05D007386 ORTHO05D009210 4.6e-36 155.2 183 52.5
Gohir.A08G081100 Gossypium hirsutum HOM05D007386 ORTHO05D009210 7.8e-36 154.5 176 52.3
Thecc.09G179900 Theobroma cacao HOM05D007386 ORTHO05D009210 1.0e-35 154.1 176 52.8
arahy.Tifrunner.gnm1.ann1.JNW8E7 Arachis hypogaea HOM05D007386 ORTHO05D009210 2.3e-35 152.9 176 52.3
Cc01_g19160 Coffea canephora HOM05D007386 ORTHO05D009210 3.0e-35 152.5 128 64.8
COL.COLO4_25451 Corchorus olitorius HOM05D007386 ORTHO05D009210 6.6e-35 151.4 179 53.1
HPP92_020354 Vanilla planifolia HOM05D007386 ORTHO05D009210 2.5e-34 149.4 173 53.2
Potri.005G213000 Populus trichocarpa HOM05D007386 ORTHO05D009210 3.3e-34 149.1 140 59.3
SGA_v2.0_scaffold1G00514 Striga asiatica HOM05D007386 ORTHO05D009210 2.8e-33 146.0 185 56.2
Nitab4.5_0000252g0090 Nicotiana tabacum HOM05D007386 ORTHO05D009210 3.6e-33 145.6 182 52.2
ATR0665G488 Amborella trichopoda HOM05D007386 ORTHO05D009210 4.7e-33 145.2 122 66.4
Nitab4.5_0009452g0010 Nicotiana tabacum HOM05D007386 ORTHO05D009210 4.7e-33 145.2 185 51.4
Dinv34778 Davidia involucrata HOM05D002659 ORTHO05D002940 1.1e-32 144.1 116 66.4
Migut.D00331 Erythranthe guttata HOM05D007386 ORTHO05D009210 1.1e-32 144.1 177 54.8
Sabra05G0162700 Salix brachista HOM05D007386 ORTHO05D009210 8.9e-32 141.0 177 52.0
unitig_0.g1138 Utricularia gibba HOM05D007386 ORTHO05D009210 8.9e-32 141.0 176 50.6
Hund09518 Selenicereus undatus HOM05D007386 ORTHO05D009210 1.5e-31 140.2 146 54.8
THA.LOC104813154 Tarenaya hassleriana HOM05D007386 ORTHO05D009210 4.4e-31 138.7 138 55.1
ClCG09G007290 Citrullus lanatus HOM05D007386 ORTHO05D009210 5.8e-31 138.3 181 49.7
CARHR252930 Cardamine hirsuta HOM05D007386 ORTHO05D009210 1.7e-30 136.7 125 57.6
A09p26200 Brassica napus HOM05D007386 ORTHO05D009210 6.4e-30 134.8 125 57.6
BraA09t38188Z Brassica rapa HOM05D007386 ORTHO05D009210 6.4e-30 134.8 125 57.6
MD03G1260500 Malus domestica HOM05D007386 ORTHO05D009210 6.4e-30 134.8 186 47.3
BcaB01g01820 Brassica carinata HOM05D007386 ORTHO05D009210 1.1e-29 134.0 125 56.8
Lj5g0008996 Lotus japonicus HOM05D007386 ORTHO05D009210 1.1e-29 134.0 131 60.3
MELO3C015793.2 Cucumis melo HOM05D007386 ORTHO05D009210 1.4e-29 133.7 189 47.1
FAN15G1284 Fragaria x ananassa HOM05D007386 ORTHO05D009210 1.9e-29 133.3 130 60.0
BcaC04g21312 Brassica carinata HOM05D007386 ORTHO05D009210 2.4e-29 132.9 172 47.7
C09p33290 Brassica napus HOM05D007386 ORTHO05D009210 2.4e-29 132.9 172 47.7
BolC9t56165H Brassica oleracea HOM05D007386 ORTHO05D009210 2.4e-29 132.9 172 47.7
Aa31LG9G9760 Aethionema arabicum HOM05D000698 ORTHO05D009210 7.1e-29 131.3 126 56.3
AL6G48080 Arabidopsis lyrata HOM05D007386 ORTHO05D009210 1.2e-28 130.6 126 57.1
Peaxi162Scf00230g01010 Petunia axillaris HOM05D007386 ORTHO05D009210 1.6e-28 130.2 176 51.1
Carub.0006s3245 Capsella rubella HOM05D007386 ORTHO05D009210 2.7e-28 129.4 126 56.3
AT4G04614 Arabidopsis thaliana HOM05D007386 ORTHO05D009210 1.0e-27 127.5 156 52.6
Thhalv10029017m.g Eutrema salsugineum HOM05D007386 ORTHO05D009210 6.6e-27 124.8 151 49.0
Sp6g04310 Schrenkiella parvula HOM05D007386 ORTHO05D009210 6.6e-27 124.8 177 46.3
MD11G1280800 Malus domestica HOM05D007386 ORTHO05D009210 4.3e-26 122.1 186 44.1
Ciclev10022575m.g Citrus clementina HOM05D007386 ORTHO05D009210 5.6e-26 121.7 132 54.5
CsaV3_7G027780 Cucumis sativus L. HOM05D007386 ORTHO05D009210 9.6e-26 120.9 194 43.3
Aqoxy5G00426 Aquilegia oxysepala HOM05D007386 ORTHO05D009210 1.6e-25 120.2 186 47.3
PSO832G2845 Papaver somniferum HOM05D007386 ORTHO05D009210 2.8e-25 119.4 141 53.9
PSO210G0643 Papaver somniferum HOM05D007386 ORTHO05D009210 9.0e-24 114.4 145 52.4
FvH4_2g23140 Fragaria vesca HOM05D007386 ORTHO05D009210 7.6e-23 111.3 190 41.6
FAN24G1308 Fragaria x ananassa HOM05D007386 ORTHO05D009210 1.7e-22 110.2 186 41.9
FAN20G3170 Fragaria x ananassa HOM05D007386 ORTHO05D009210 2.2e-22 109.8 132 52.3
RcHm_v2.0_Chr6g0290391 Rosa chinensis HOM05D007386 ORTHO05D009210 2.2e-22 109.8 188 45.2
Sed0008482 Sechium edule HOM05D007386 ORTHO05D009210 6.4e-22 108.2 183 40.4
SMO351G0424 Selaginella moellendorffii HOM05D007386 ORTHO05D009210 1.1e-21 107.5 125 51.2
Atru.chr5.1489 Acer truncatum HOM05D007386 ORTHO05D009210 2.3e-19 99.8 176 42.0
Pp3c25_4880 Physcomitrium patens HOM05D007386 ORTHO05D009210 3.0e-19 99.4 181 42.5
Sopen09g027270 Solanum pennellii HOM05D007386 ORTHO05D009210 3.3e-18 95.9 177 41.8
FAN27G1502 Fragaria x ananassa HOM05D007386 ORTHO05D009210 6.9e-16 88.2 127 48.8
SGA_v2.0_scaffold244G44361 Striga asiatica HOM05D007386 ORTHO05D009210 6.9e-16 88.2 180 43.3
Solyc09g065510.3 Solanum lycopersicum HOM05D007386 ORTHO05D009210 2.6e-15 86.3 177 40.1
CAN.G1105.2 Capsicum annuum HOM05D007386 ORTHO05D009210 9.9e-15 84.3 176 42.6
PGSC0003DMG400019353 Solanum tuberosum HOM05D007386 ORTHO05D009210 2.2e-14 83.2 158 40.5
Mapoly0035s0101 Marchantia polymorpha HOM05D007386 ORTHO05D009210 2.9e-14 82.8 152 37.5
Os06g0630300 Oryza sativa ssp. japonica HOM05D007386 ORTHO05D009210 1.9e-13 80.1 186 38.7
SEGI_27286 Sequoiadendron giganteum HOM05D007386 ORTHO05D009210 2.7e-12 76.3 78 53.8
arahy.Tifrunner.gnm1.ann1.90IGTQ Arachis hypogaea HOM05D007386 ORTHO05D009210 4.6e-12 75.5 115 45.2
Cre17.g717700 Chlamydomonas reinhardtii HOM05D007386 ORTHO05D009210 3.1e-08 62.8 128 40.6
SGA_v2.0_scaffold90G27801 Striga asiatica HOM05D000069 ORTHO05D399115 3.1e-08 62.8 136 42.6


User provided reference genes

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