Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G0975 Salvia bowleyana HOM05D000576 ORTHO05D000368 5.9e-118 427.6 219 100.0
Rhsim02G0021500 Rhododendron simsii HOM05D000576 ORTHO05D000368 1.9e-15 87.0 272 27.6
FvH4_1g04260 Fragaria vesca HOM05D002514 ORTHO05D000368 1.2e-14 84.3 230 31.3
Migut.O00220 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.1e-14 83.6 295 29.5
FvH4_1g04280 Fragaria vesca HOM05D000576 ORTHO05D000368 4.7e-14 82.4 278 28.4
Prupe.7G247200 Prunus persica HOM05D000576 ORTHO05D000368 8.0e-14 81.6 273 28.9
Migut.I00397 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.5e-12 77.4 295 29.5
Hma1.2p1_1488F.1_g286620 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 2.6e-12 76.6 281 27.4
FAN19G2457 Fragaria x ananassa HOM05D000576 ORTHO05D000368 7.5e-12 75.1 266 27.4
FvH4_1g04270 Fragaria vesca HOM05D000576 ORTHO05D000368 3.7e-11 72.8 276 26.4
FAN19G1792 Fragaria x ananassa HOM05D000576 ORTHO05D000368 4.9e-11 72.4 269 27.1
Hma1.2p1_0024F.1_g015920 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 4.9e-11 72.4 297 26.9
PGSC0003DMG400017941 Solanum tuberosum HOM05D000576 ORTHO05D000368 4.9e-11 72.4 287 26.5
Peaxi162Scf00310g00017 Petunia axillaris HOM05D000576 ORTHO05D000368 6.3e-11 72.0 273 28.6
RcHm_v2.0_Chr3g0449571 Rosa chinensis HOM05D000576 ORTHO05D000368 6.3e-11 72.0 277 26.0
Peaxi162Scf00041g00112 Petunia axillaris HOM05D000576 ORTHO05D000368 1.8e-10 70.5 273 27.8
RcHm_v2.0_Chr2g0105201 Rosa chinensis HOM05D000576 ORTHO05D000368 2.4e-10 70.1 278 25.2
Dinv21743 Davidia involucrata HOM05D000576 ORTHO05D000368 3.1e-10 69.7 278 25.2
Migut.O00221 Erythranthe guttata HOM05D000576 ORTHO05D000368 3.1e-10 69.7 284 27.8
PGSC0003DMG400010328 Solanum tuberosum HOM05D000576 ORTHO05D000368 3.1e-10 69.7 283 26.9
Rhsim07G0244200 Rhododendron simsii HOM05D000576 ORTHO05D000368 7.0e-10 68.6 235 25.5
Nitab4.5_0000099g0260 Nicotiana tabacum HOM05D000576 ORTHO05D000368 9.2e-10 68.2 275 26.9
Cc10_g03840 Coffea canephora HOM05D000576 ORTHO05D000368 1.6e-09 67.4 279 26.2
SGA_v2.0_scaffold70G23622 Striga asiatica HOM05D000576 ORTHO05D000368 1.6e-09 67.4 89 43.8
RcHm_v2.0_Chr3g0449531 Rosa chinensis HOM05D000576 ORTHO05D000368 3.5e-09 66.2 102 39.2
Sopen04g028590 Solanum pennellii HOM05D000576 ORTHO05D000368 3.5e-09 66.2 255 27.1
Prupe.5G181600 Prunus persica HOM05D000576 ORTHO05D000368 4.5e-09 65.9 284 26.4
Cfa001772 Carpinus fangiana HOM05D000576 ORTHO05D000368 5.9e-09 65.5 283 26.5
FvH4_1g15880 Fragaria vesca HOM05D000576 ORTHO05D000368 5.9e-09 65.5 272 22.1
PGSC0003DMG402009486 Solanum tuberosum HOM05D000576 ORTHO05D000368 5.9e-09 65.5 271 27.7
FvH4_7g08150 Fragaria vesca HOM05D000576 ORTHO05D000368 7.8e-09 65.1 271 23.2
FAN01G1348 Fragaria x ananassa HOM05D000576 ORTHO05D000368 7.8e-09 65.1 286 23.4
RcHm_v2.0_Chr3g0449591 Rosa chinensis HOM05D000576 ORTHO05D000368 7.8e-09 65.1 106 36.8
FAN06G0443 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.3e-08 64.3 271 23.2
RcHm_v2.0_Chr1g0330451 Rosa chinensis HOM05D000576 ORTHO05D000368 1.3e-08 64.3 271 27.3
Cc11_g02250 Coffea canephora HOM05D000576 ORTHO05D000368 2.3e-08 63.5 278 23.7
Nitab4.5_0000131g0170 Nicotiana tabacum HOM05D000576 ORTHO05D000368 2.3e-08 63.5 91 38.5
FAN19G3107 Fragaria x ananassa HOM05D000555 ORTHO05D000646 2.9e-08 63.2 251 25.1
FAN01G1594 Fragaria x ananassa HOM05D000576 ORTHO05D000368 5.0e-08 62.4 271 22.9
Prupe.6G354500 Prunus persica HOM05D000576 ORTHO05D000368 5.0e-08 62.4 292 25.3
RcHm_v2.0_Chr3g0449551 Rosa chinensis HOM05D000576 ORTHO05D000368 5.0e-08 62.4 113 35.4
COL.COLO4_34465 Corchorus olitorius HOM05D000576 ORTHO05D000368 6.6e-08 62.0 84 36.9
Solyc04g072435.1 Solanum lycopersicum HOM05D000576 ORTHO05D000368 6.6e-08 62.0 293 25.3
Solyc04g150167.1 Solanum lycopersicum HOM05D000576 ORTHO05D000368 6.6e-08 62.0 288 25.7
COL.COLO4_29715 Corchorus olitorius HOM05D000576 ORTHO05D000368 8.6e-08 61.6 137 35.8
FvH4_6g01850 Fragaria vesca HOM05D000576 ORTHO05D000368 1.1e-07 61.2 92 40.2
Lj8A85G34 Lonicera japonica HOM05D000576 ORTHO05D000368 1.5e-07 60.8 204 28.4
MD12G1064700 Malus domestica HOM05D000576 ORTHO05D000368 1.5e-07 60.8 152 30.3
RcHm_v2.0_Chr1g0360451 Rosa chinensis HOM05D000576 ORTHO05D000368 1.5e-07 60.8 87 39.1
FAN05G5357 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.9e-07 60.5 92 40.2
Hma1.2p1_2024F.1_g311420 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 1.9e-07 60.5 326 25.5
Nitab4.5_0010358g0010 Nicotiana tabacum HOM05D000576 ORTHO05D000368 1.9e-07 60.5 91 37.4
Migut.I01153 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.5e-07 60.1 84 40.5
Nitab4.5_0005549g0050 Nicotiana tabacum HOM05D000576 ORTHO05D000368 2.5e-07 60.1 107 34.6
Prupe.8G159200 Prunus persica HOM05D000576 ORTHO05D000368 2.5e-07 60.1 84 35.7
PGSC0003DMG401027561 Solanum tuberosum HOM05D000576 ORTHO05D000368 2.5e-07 60.1 278 24.1
Ciclev10020079m.g Citrus clementina HOM05D000576 ORTHO05D000368 3.3e-07 59.7 82 37.8
FAN17G0971 Fragaria x ananassa HOM05D000615 ORTHO05D000447 4.3e-07 59.3 81 39.5
Hma1.2p1_0108F.1_g052030 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 4.3e-07 59.3 277 24.9
Hma1.2p1_1677F.1_g297050 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 4.3e-07 59.3 92 40.2
Hma1.2p1_1791F.1_g302520 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 4.3e-07 59.3 92 40.2
Lj8C98T11 Lonicera japonica HOM05D000576 ORTHO05D000368 4.3e-07 59.3 88 37.5
Sopen04g031670 Solanum pennellii HOM05D000576 ORTHO05D000368 4.3e-07 59.3 84 38.1
TWI18G0091 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 4.3e-07 59.3 92 37.0
Migut.I01156 Erythranthe guttata HOM05D000576 ORTHO05D000368 5.6e-07 58.9 84 35.7
FAN28G2519 Fragaria x ananassa HOM05D000576 ORTHO05D000368 5.6e-07 58.9 285 24.6
RcHm_v2.0_Chr3g0471621 Rosa chinensis HOM05D000576 ORTHO05D000368 5.6e-07 58.9 84 38.1
RcHm_v2.0_Chr7g0197551 Rosa chinensis HOM05D000576 ORTHO05D000368 5.6e-07 58.9 89 38.2
Migut.I01059 Erythranthe guttata HOM05D000576 ORTHO05D000368 7.3e-07 58.5 84 39.3
Migut.J00214 Erythranthe guttata HOM05D000576 ORTHO05D000368 7.3e-07 58.5 278 24.8
Lj5A369G34 Lonicera japonica HOM05D000576 ORTHO05D000368 7.3e-07 58.5 87 36.8
Prupe.1G496800 Prunus persica HOM05D000576 ORTHO05D000368 7.3e-07 58.5 192 27.1
Prupe.7G069300 Prunus persica HOM05D000576 ORTHO05D000368 7.3e-07 58.5 84 39.3
MD02G1028400 Malus domestica HOM05D000005 ORTHO05D000368 9.5e-07 58.2 278 21.9
Nitab4.5_0001735g0180 Nicotiana tabacum HOM05D000576 ORTHO05D000368 9.5e-07 58.2 84 40.5
Prupe.1G496600 Prunus persica HOM05D000576 ORTHO05D000368 9.5e-07 58.2 192 27.6
TWI63G1035 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 9.5e-07 58.2 105 33.3
Lj8C98G11 Lonicera japonica HOM05D000576 ORTHO05D000368 1.2e-06 57.8 88 36.4
Nitab4.5_0005673g0030 Nicotiana tabacum HOM05D000576 ORTHO05D000368 1.2e-06 57.8 227 26.4
Prupe.8G038200 Prunus persica HOM05D000576 ORTHO05D000368 1.2e-06 57.8 83 42.2
RcHm_v2.0_Chr3g0480841 Rosa chinensis HOM05D000576 ORTHO05D000368 1.2e-06 57.8 91 36.3
TWI63G0411 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 1.2e-06 57.8 84 33.3
CAN.G617.7 Capsicum annuum HOM05D000576 ORTHO05D000368 1.6e-06 57.4 83 43.4
Peaxi162Scf00215g01211 Petunia axillaris HOM05D000576 ORTHO05D000368 1.6e-06 57.4 85 38.8
GSVIVG01014322001 Vitis vinifera HOM05D000576 ORTHO05D000368 1.6e-06 57.4 100 35.0
Migut.E00771 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.1e-06 57.0 102 38.2
Ciclev10008324m.g Citrus clementina HOM05D000576 ORTHO05D000368 2.8e-06 56.6 82 36.6
Migut.G01312 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.8e-06 56.6 92 38.0
MD14G1064800 Malus domestica HOM05D000576 ORTHO05D000368 2.8e-06 56.6 196 27.6
TWI31G1446 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 2.8e-06 56.6 84 34.5
TWI63G0561 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 2.8e-06 56.6 93 31.2
FvH4_1g15870 Fragaria vesca HOM05D000555 ORTHO05D000646 3.6e-06 56.2 84 35.7
MD05G1360100 Malus domestica HOM05D000576 ORTHO05D000368 3.6e-06 56.2 92 35.9
Nitab4.5_0008827g0010 Nicotiana tabacum HOM05D000576 ORTHO05D000368 3.6e-06 56.2 84 40.5
RcHm_v2.0_Chr6g0298681 Rosa chinensis HOM05D000576 ORTHO05D000368 3.6e-06 56.2 84 36.9
ClCG06G017710 Citrullus lanatus HOM05D000576 ORTHO05D000368 4.7e-06 55.8 228 22.8
Hma1.2p1_0183F.1_g081070 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 4.7e-06 55.8 87 36.8
Cfa013470 Carpinus fangiana HOM05D000576 ORTHO05D000368 6.1e-06 55.5 88 36.4
MD11G1200500 Malus domestica HOM05D000576 ORTHO05D000368 6.1e-06 55.5 87 33.3
Peaxi162Scf00041g00103 Petunia axillaris HOM05D000576 ORTHO05D000368 6.1e-06 55.5 84 41.7
PGSC0003DMG400026860 Solanum tuberosum HOM05D000576 ORTHO05D000368 6.1e-06 55.5 84 35.7
Migut.I00739 Erythranthe guttata HOM05D000576 ORTHO05D000368 8.0e-06 55.1 91 39.6
FvH4_1g04271 Fragaria vesca HOM05D000576 ORTHO05D000368 8.0e-06 55.1 82 34.1
Prupe.I001500 Prunus persica HOM05D000576 ORTHO05D000368 8.0e-06 55.1 100 30.0
Rhsim08G0184100 Rhododendron simsii HOM05D000576 ORTHO05D000368 8.0e-06 55.1 189 28.6
SGA_v2.0_scaffold225G42991 Striga asiatica HOM05D000576 ORTHO05D000368 8.0e-06 55.1 282 24.1


User provided reference genes

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