Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G0879 Salvia bowleyana HOM05D006718 ORTHO05D008492 1.0e-277 959.5 519 100.0
MSTRG.5086 Avicennia marina HOM05D006718 ORTHO05D008492 1.4e-133 480.7 526 54.0
SGA_v2.0_scaffold196G40987 Striga asiatica HOM05D006718 ORTHO05D008492 4.4e-127 459.1 498 54.0
Migut.O00435 Erythranthe guttata HOM05D006718 ORTHO05D008492 4.5e-124 449.1 505 54.9
unitig_899.g15585 Utricularia gibba HOM05D006718 ORTHO05D008492 8.9e-72 275.4 438 42.5
Migut.N01880 Erythranthe guttata HOM05D006718 ORTHO05D008492 1.1e-61 241.9 224 62.1
Migut.N01879 Erythranthe guttata HOM05D006718 ORTHO05D008492 2.1e-57 227.6 280 49.6
Dinv24591 Davidia involucrata HOM05D006718 ORTHO05D008492 5.8e-55 219.5 526 35.7
Lj7A493G35 Lonicera japonica HOM05D006718 ORTHO05D008492 4.2e-53 213.4 303 46.5
Cc02_g32070 Coffea canephora HOM05D006718 ORTHO05D008492 2.1e-52 211.1 581 33.4
MD02G1263300 Malus domestica HOM05D006718 ORTHO05D008492 2.1e-52 211.1 547 34.2
Nitab4.5_0001611g0090 Nicotiana tabacum HOM05D006718 ORTHO05D008492 1.3e-51 208.4 406 37.9
Cfa010452 Carpinus fangiana HOM05D006718 ORTHO05D008492 3.0e-51 207.2 498 36.3
AUR62014308 Chenopodium quinoa HOM05D006718 ORTHO05D008492 6.7e-51 206.1 577 34.8
MD07G1054700 Malus domestica HOM05D006718 ORTHO05D008492 1.1e-50 205.3 562 33.5
AUR62034103 Chenopodium quinoa HOM05D006718 ORTHO05D008492 1.9e-50 204.5 565 34.5
DCAR_006628 Daucus carota HOM05D006718 ORTHO05D008492 6.9e-48 196.1 229 50.2
Sc09g0004890 Simmondsia chinensis HOM05D006718 ORTHO05D008492 6.9e-48 196.1 437 34.8
QL04p050382 Quercus lobata HOM05D006718 ORTHO05D008492 1.2e-47 195.3 549 34.6
TWI38G0042 Tripterygium wilfordii HOM05D006718 ORTHO05D008492 1.0e-46 192.2 565 35.4
Hund06826 Selenicereus undatus HOM05D006718 ORTHO05D008492 2.9e-46 190.7 545 34.1
PGSC0003DMG400027524 Solanum tuberosum HOM05D006718 ORTHO05D008492 6.5e-46 189.5 684 30.1
Manes.07G082900 Manihot esculenta HOM05D006718 ORTHO05D008492 8.4e-46 189.1 525 34.3
Atru.chr12.1182 Acer truncatum HOM05D006718 ORTHO05D008492 7.1e-45 186.0 554 33.8
Solyc01g096920.3 Solanum lycopersicum HOM05D006718 ORTHO05D008492 1.6e-44 184.9 424 36.3
EL10Ac4g08778 Beta vulgaris HOM05D006718 ORTHO05D008492 2.1e-44 184.5 558 32.1
Thecc.10G129200 Theobroma cacao HOM05D006718 ORTHO05D008492 2.7e-44 184.1 511 35.6
Ah.06g191200 Amaranthus hybridus HOM05D006718 ORTHO05D008492 3.5e-44 183.7 249 43.8
Haze_03406 Corylus avellana HOM05D006718 ORTHO05D008492 4.6e-44 183.3 486 37.7
Nitab4.5_0005056g0030 Nicotiana tabacum HOM05D006718 ORTHO05D008492 7.9e-44 182.6 415 35.4
Peaxi162Scf00647g00315 Petunia axillaris HOM05D006718 ORTHO05D008492 7.9e-44 182.6 558 32.8
Prupe.2G061400 Prunus persica HOM05D006718 ORTHO05D008492 1.8e-43 181.4 610 32.8
MBI15_g36944_MAGBIO Magnolia biondii HOM05D006718 ORTHO05D008492 6.7e-43 179.5 223 50.2
Sopen01g040630 Solanum pennellii HOM05D006718 ORTHO05D008492 6.7e-43 179.5 663 30.0
CSS0042038 Camellia sinensis var. sinensis HOM05D006718 ORTHO05D008492 1.9e-42 177.9 202 50.0
TAR369G0954 Trochodendron aralioides HOM05D006718 ORTHO05D008492 3.3e-42 177.2 485 33.0
CAN.G134.56 Capsicum annuum HOM05D006718 ORTHO05D008492 3.7e-41 173.7 407 35.9
Duzib128G0030 Durio zibethinus HOM05D006718 ORTHO05D008492 1.4e-40 171.8 311 42.1
CiPaw.13G047100 Carya illinoinensis HOM05D006718 ORTHO05D008492 9.0e-40 169.1 311 39.5
Nn2g14019 Nelumbo nucifera HOM05D006718 ORTHO05D008492 9.0e-40 169.1 517 34.0
Eucgr.J00311 Eucalyptus grandis HOM05D006718 ORTHO05D008492 1.3e-38 165.2 465 31.4
Ciclev10015184m.g Citrus clementina HOM05D006718 ORTHO05D008492 3.8e-38 163.7 495 33.1
PSO339G3483 Papaver somniferum HOM05D006718 ORTHO05D008492 1.9e-37 161.4 558 32.8
Gohir.A06G171400 Gossypium hirsutum HOM05D006718 ORTHO05D008492 3.2e-37 160.6 431 34.8
PGR044G1203 Punica granatum HOM05D006718 ORTHO05D008492 3.2e-37 160.6 528 34.7
FAN23G2020 Fragaria x ananassa HOM05D006718 ORTHO05D008492 4.2e-37 160.2 588 33.0
BolC9t58690H Brassica oleracea HOM05D006718 ORTHO05D008492 1.6e-36 158.3 440 32.5
PSO384G1654 Papaver somniferum HOM05D006718 ORTHO05D008492 1.6e-36 158.3 564 32.1
HanXRQChr09g0250361 Helianthus annuus HOM05D006718 ORTHO05D008492 2.1e-36 157.9 523 32.5
Potri.010G246500 Populus trichocarpa HOM05D006718 ORTHO05D008492 2.1e-36 157.9 328 35.7
RcHm_v2.0_Chr3g0490591 Rosa chinensis HOM05D006718 ORTHO05D008492 2.1e-36 157.9 525 34.9
FvH4_1g30390 Fragaria vesca HOM05D006718 ORTHO05D008492 2.7e-36 157.5 554 35.0
FAN19G2415 Fragaria x ananassa HOM05D006718 ORTHO05D008492 4.6e-36 156.8 554 34.5
Carub.0006s1670 Capsella rubella HOM05D006718 ORTHO05D008492 1.3e-35 155.2 423 32.9
MELO3C019922.2 Cucumis melo HOM05D006718 ORTHO05D008492 1.8e-35 154.8 447 33.3
Lsat_1_v5_gn_4_139420 Lactuca sativa HOM05D006718 ORTHO05D008492 2.3e-35 154.5 551 32.3
Sabra08G0007500 Salix brachista HOM05D006718 ORTHO05D008492 3.0e-35 154.1 337 35.9
CsaV3_6G004530 Cucumis sativus L. HOM05D006718 ORTHO05D008492 5.1e-35 153.3 436 34.2
BcaB08g36679 Brassica carinata HOM05D006718 ORTHO05D008492 6.7e-35 152.9 197 45.7
Ca_03601_v3 Cicer arietinum L. HOM05D006718 ORTHO05D008492 6.7e-35 152.9 370 34.9
BcaC04g18692 Brassica carinata HOM05D006718 ORTHO05D008492 8.7e-35 152.5 197 46.2
CANSAT56G0860 Cannabis sativa HOM05D006718 ORTHO05D008492 1.1e-34 152.1 493 32.5
C09p58250 Brassica napus HOM05D006718 ORTHO05D008492 1.5e-34 151.8 440 31.8
COL.COLO4_28900 Corchorus olitorius HOM05D006718 ORTHO05D008492 1.5e-34 151.8 211 49.3
Gohir.D06G179500 Gossypium hirsutum HOM05D006718 ORTHO05D008492 3.3e-34 150.6 431 33.2
Gorai.010G210100 Gossypium raimondii HOM05D006718 ORTHO05D008492 3.3e-34 150.6 431 33.2
Potri.008G012250 Populus trichocarpa HOM05D006718 ORTHO05D008492 5.7e-34 149.8 285 38.2
Sabra10G0192200 Salix brachista HOM05D006718 ORTHO05D008492 9.7e-34 149.1 312 35.3
vmacro20846 Vaccinium macrocarpon HOM05D006718 ORTHO05D008492 9.7e-34 149.1 450 31.3
BraA10t44177Z Brassica rapa HOM05D006718 ORTHO05D008492 1.3e-33 148.7 231 45.0
FAN28G2084 Fragaria x ananassa HOM05D006718 ORTHO05D008492 1.6e-33 148.3 549 33.5
Sp6g25880 Schrenkiella parvula HOM05D006718 ORTHO05D008492 2.2e-33 147.9 537 34.5
Thhalv10013325m.g Eutrema salsugineum HOM05D006718 ORTHO05D008492 4.8e-33 146.7 410 33.4
AT5G18440 Arabidopsis thaliana HOM05D006718 ORTHO05D008492 1.1e-32 145.6 451 32.2
ECA232G4797 Erigeron canadensis HOM05D006718 ORTHO05D008492 1.4e-32 145.2 551 29.9
THA.LOC104811338 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 1.4e-32 145.2 483 32.1
A10p21140 Brassica napus HOM05D006718 ORTHO05D008492 2.4e-32 144.4 449 33.0
HPP92_007508 Vanilla planifolia HOM05D006718 ORTHO05D008492 5.3e-32 143.3 543 29.8
ClCG08G008520 Citrullus lanatus HOM05D006718 ORTHO05D008492 6.9e-32 142.9 448 35.5
Sed0008467 Sechium edule HOM05D006718 ORTHO05D008492 6.9e-32 142.9 490 31.8
AL6G29690 Arabidopsis lyrata HOM05D006718 ORTHO05D008492 2.0e-31 141.4 438 31.5
Glyma.14G084400 Glycine max HOM05D006718 ORTHO05D008492 2.6e-31 141.0 561 29.6
Lj3g0008993 Lotus japonicus HOM05D006718 ORTHO05D008492 7.7e-31 139.4 253 39.5
Lalb_Chr25g0284721 Lupinus albus HOM05D006718 ORTHO05D008492 1.0e-30 139.0 502 33.1
Os01g0814000 Oryza sativa ssp. japonica HOM05D006718 ORTHO05D008492 2.2e-30 137.9 232 39.7
Phvul.011G216700 Phaseolus vulgaris HOM05D006718 ORTHO05D008492 3.8e-30 137.1 565 29.9
VMungo0647G0438 Vigna mungo HOM05D006718 ORTHO05D008492 1.1e-29 135.6 468 31.4
CARHR194580 Cardamine hirsuta HOM05D006718 ORTHO05D008492 1.9e-29 134.8 197 43.7
ATR0068G071 Amborella trichopoda HOM05D006718 ORTHO05D008492 3.2e-29 134.0 479 32.8
Aa31LG11G11170 Aethionema arabicum HOM05D006718 ORTHO05D008492 2.7e-28 131.0 544 30.9
GSVIVG01027215001 Vitis vinifera HOM05D006718 ORTHO05D008492 6.1e-28 129.8 408 34.1
Aqoxy1G00086 Aquilegia oxysepala HOM05D006718 ORTHO05D008492 7.9e-28 129.4 567 30.0
Glyma.17G240500 Glycine max HOM05D006718 ORTHO05D008492 7.9e-28 129.4 566 30.7
Zm00001eb149940 Zea mays HOM05D006718 ORTHO05D008492 7.9e-28 129.4 251 36.3
Medtr2g067220 Medicago truncatula HOM05D006718 ORTHO05D008492 1.8e-27 128.3 256 39.1
TPR.G33809 Trifolium pratense HOM05D006718 ORTHO05D008492 1.8e-27 128.3 254 40.6
Cpa.g.sc163.26 Carica papaya HOM05D006718 ORTHO05D008492 5.7e-26 123.2 178 45.5
THA.LOC104824416 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 8.2e-25 119.4 544 28.3
FAN26G3384 Fragaria x ananassa HOM05D006718 ORTHO05D008492 1.7e-22 111.7 575 29.9
Oeu051588.1 Olea europaea HOM05D054970 ORTHO05D049444 1.6e-20 105.1 228 38.2
Rhsim01G0121600 Rhododendron simsii HOM05D006718 ORTHO05D008492 2.7e-20 104.4 537 29.8
CDE04G2801 Ceratophyllum demersum HOM05D001339 ORTHO05D003609 3.6e-20 104.0 489 31.1
Mapoly0025s0136 Marchantia polymorpha HOM05D006718 ORTHO05D008492 1.6e-12 78.6 271 28.8
Peaxi162Scf00558g00016 Petunia axillaris HOM05D006718 ORTHO05D008492 2.1e-12 78.2 173 30.6
AagrBONN_evm.TU.Sc2ySwM_344.1162 Anthoceros agrestis HOM05D006718 ORTHO05D008492 4.0e-11 73.9 260 28.5
A02p04900 Brassica napus HOM05D006718 ORTHO05D008492 5.7e-10 70.1 453 23.8
Pp3c27_4140 Physcomitrium patens HOM05D006718 ORTHO05D008492 4.8e-09 67.0 305 27.2


User provided reference genes

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