Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G0794 Salvia bowleyana HOM05D006627 ORTHO05D007753 0.0e+00 2216.4 1136 100.0
MSTRG.27091 Avicennia marina HOM05D006627 ORTHO05D007753 0.0e+00 1082.8 1195 55.6
MSTRG.8718 Avicennia marina HOM05D006627 ORTHO05D007753 2.0e-265 919.8 1193 49.9
Migut.F00307 Erythranthe guttata HOM05D006627 ORTHO05D007753 9.3e-231 804.7 1200 47.8
Oeu060456.3 Olea europaea HOM05D006627 ORTHO05D007753 1.5e-204 717.6 1214 43.5
Peaxi162Scf00444g00008 Petunia axillaris HOM05D006627 ORTHO05D007753 4.6e-153 546.6 1213 37.3
Cc02_g02490 Coffea canephora HOM05D006627 ORTHO05D007753 3.6e-142 510.4 1249 35.9
Peaxi162Scf00618g00717 Petunia axillaris HOM05D006627 ORTHO05D007753 1.4e-117 428.7 1239 33.6
Dinv28394 Davidia involucrata HOM05D006627 ORTHO05D007753 5.4e-114 416.8 1250 33.3
unitig_46.g18802 Utricularia gibba HOM05D006627 ORTHO05D007753 8.7e-104 382.9 1096 34.0
PGSC0003DMG400010123 Solanum tuberosum HOM05D006627 ORTHO05D007753 1.2e-97 362.5 1117 32.5
CAN.G236.7 Capsicum annuum HOM05D006627 ORTHO05D007753 1.8e-96 358.6 1103 32.9
Sopen03g004000 Solanum pennellii HOM05D006627 ORTHO05D007753 3.3e-95 354.4 1098 32.7
Lj1C1004T5 Lonicera japonica HOM05D006627 ORTHO05D007753 1.3e-94 352.4 1271 30.9
Solyc03g025150.4 Solanum lycopersicum HOM05D006627 ORTHO05D007753 1.6e-94 352.1 1099 32.5
Actinidia34148 Actinidia chinensis HOM05D001410 ORTHO05D007753 7.2e-74 283.5 1187 31.7
DCAR_020266 Daucus carota HOM05D006627 ORTHO05D007753 7.2e-74 283.5 1223 30.7
vmacro06637 Vaccinium macrocarpon HOM05D006627 ORTHO05D007753 1.8e-72 278.9 1199 30.6
Duzib205G1471 Durio zibethinus HOM05D006627 ORTHO05D007753 8.2e-70 270.0 1204 29.3
GSVIVG01028875001 Vitis vinifera HOM05D006627 ORTHO05D007753 1.4e-69 269.2 1226 28.5
COL.COLO4_28015 Corchorus olitorius HOM05D006627 ORTHO05D007753 5.9e-68 263.8 1181 28.3
Rhsim03G0190100 Rhododendron simsii HOM05D006627 ORTHO05D007753 5.9e-68 263.8 1210 29.8
Thecc.03G182600 Theobroma cacao HOM05D006627 ORTHO05D007753 7.7e-68 263.5 1283 28.1
Duzib084G0535 Durio zibethinus HOM05D006627 ORTHO05D007753 5.0e-67 260.8 1263 29.1
Rhsim07G0129200 Rhododendron simsii HOM05D006627 ORTHO05D007753 1.8e-64 252.3 1205 30.0
Rhsim07G0129400 Rhododendron simsii HOM05D006627 ORTHO05D007753 5.2e-64 250.8 1226 28.9
Hma1.2p1_0327F.1_g126380 Hydrangea macrophylla HOM05D006627 ORTHO05D007753 1.3e-62 246.1 600 37.8
TWI23G0587 Tripterygium wilfordii HOM05D006627 ORTHO05D007753 5.9e-60 237.3 1182 28.2
CSS0035854 Camellia sinensis var. sinensis HOM05D006627 ORTHO05D007753 2.2e-59 235.3 1086 29.1
CSS0044230 Camellia sinensis var. sinensis HOM05D006627 ORTHO05D007753 2.2e-59 235.3 1086 29.1
Nn1g01607 Nelumbo nucifera HOM05D006627 ORTHO05D007753 8.5e-59 233.4 1428 27.2
Prupe.2G299600 Prunus persica HOM05D006627 ORTHO05D007753 1.5e-58 232.6 1252 27.6
Ciclev10004200m.g Citrus clementina HOM05D006627 ORTHO05D007753 3.2e-58 231.5 1217 28.3
Actinidia03134 Actinidia chinensis HOM05D006627 ORTHO05D007753 2.1e-57 228.8 1216 28.2
Gohir.A10G234800 Gossypium hirsutum HOM05D006627 ORTHO05D007753 3.6e-57 228.0 1178 27.7
Gohir.D10G247200 Gossypium hirsutum HOM05D006627 ORTHO05D007753 6.1e-57 227.3 1184 27.9
unitig_747.g21861 Utricularia gibba HOM05D006627 ORTHO05D007753 8.0e-57 226.9 790 32.2
Gorai.011G285600 Gossypium raimondii HOM05D006627 ORTHO05D007753 1.4e-56 226.1 1176 27.7
MD07G1277900 Malus domestica HOM05D006627 ORTHO05D007753 3.7e-54 218.0 1249 27.5
Nn1g01606 Nelumbo nucifera HOM05D006627 ORTHO05D007753 4.8e-54 217.6 1407 26.4
TWI14G0178 Tripterygium wilfordii HOM05D006627 ORTHO05D007753 6.3e-54 217.2 1166 27.3
FAN06G3118 Fragaria x ananassa HOM05D006627 ORTHO05D007753 8.3e-54 216.9 1231 27.9
FvH4_7g30110 Fragaria vesca HOM05D006627 ORTHO05D007753 2.4e-53 215.3 1254 27.8
TAR375G0196 Trochodendron aralioides HOM05D006627 ORTHO05D007753 2.4e-53 215.3 1422 28.2
RcHm_v2.0_Chr1g0378101 Rosa chinensis HOM05D006627 ORTHO05D007753 7.0e-53 213.8 1256 27.1
Haze_00034 Corylus avellana HOM05D006627 ORTHO05D007753 1.2e-52 213.0 1157 26.4
FAN03G1328 Fragaria x ananassa HOM05D006627 ORTHO05D007753 1.2e-52 213.0 1218 28.0
FAN10G1355 Fragaria x ananassa HOM05D006627 ORTHO05D007753 1.2e-52 213.0 1219 27.7
FAN10G1026 Fragaria x ananassa HOM05D006627 ORTHO05D007753 1.6e-52 212.6 1219 28.2
TAR629G2332 Trochodendron aralioides HOM05D006627 ORTHO05D007753 4.5e-52 211.1 1445 26.9
vmacro06638 Vaccinium macrocarpon HOM05D006627 ORTHO05D007753 7.7e-52 210.3 1194 28.2
FAN03G3330 Fragaria x ananassa HOM05D006627 ORTHO05D007753 1.3e-51 209.5 1220 28.1
FAN06G3804 Fragaria x ananassa HOM05D006627 ORTHO05D007753 3.3e-50 204.9 1257 27.5
FAN01G2627 Fragaria x ananassa HOM05D006627 ORTHO05D007753 2.1e-49 202.2 1228 27.0
Dinv35244 Davidia involucrata HOM05D006627 ORTHO05D007753 4.4e-47 194.5 218 52.3
Atru.chr1.369 Acer truncatum HOM05D006627 ORTHO05D007753 1.3e-46 193.0 1123 27.7
Atru.ctg97_1.2 Acer truncatum HOM05D006627 ORTHO05D007753 1.3e-46 193.0 1123 27.7
MD01G1207000 Malus domestica HOM05D006627 ORTHO05D007753 2.8e-46 191.8 1352 25.1
Atru.chr1.386 Acer truncatum HOM05D006627 ORTHO05D007753 3.7e-46 191.4 1122 27.3
Cpa.g.sc107.97 Carica papaya HOM05D006627 ORTHO05D007753 1.1e-45 189.9 1161 27.0
MBI04_g35056_MAGBIO Magnolia biondii HOM05D006627 ORTHO05D007753 1.1e-45 189.9 1463 26.2
TAR374G1318 Trochodendron aralioides HOM05D006627 ORTHO05D007753 5.6e-42 177.6 1287 26.2
Potri.004G079000 Populus trichocarpa HOM05D006627 ORTHO05D007753 2.8e-41 175.3 1304 26.1
Sabra17G0119400 Salix brachista HOM05D001410 ORTHO05D006840 2.6e-39 168.7 1214 27.0
GSVIVG01019397001 Vitis vinifera HOM05D006627 ORTHO05D007753 1.4e-37 162.9 1254 26.0
DCAR_009389 Daucus carota HOM05D006627 ORTHO05D007753 1.0e-35 156.8 1250 24.6
Potri.017G142600 Populus trichocarpa HOM05D006627 ORTHO05D007753 9.5e-34 150.2 1228 25.1
Actinidia28362 Actinidia chinensis HOM05D006627 ORTHO05D007753 2.8e-33 148.7 1338 25.1
PSO478G1013 Papaver somniferum HOM05D006627 ORTHO05D007753 4.7e-33 147.9 1275 26.4
PSO782G1175 Papaver somniferum HOM05D006627 ORTHO05D007753 5.8e-31 141.0 1277 26.9
Sabra04G0052500 Salix brachista HOM05D006627 ORTHO05D007753 9.8e-31 140.2 1248 25.2
Dinv38916 Davidia involucrata HOM05D006627 ORTHO05D007753 1.9e-29 136.0 1330 24.9
Actinidia31835 Actinidia chinensis HOM05D006627 ORTHO05D007753 7.0e-29 134.0 1090 25.8
unitig_37.g11967 Utricularia gibba HOM05D006627 ORTHO05D007753 1.2e-28 133.3 910 27.6
Dinv35242 Davidia involucrata HOM05D006627 ORTHO05D007753 5.1e-27 127.9 345 35.1
QL12p032277 Quercus lobata HOM05D006627 ORTHO05D007753 1.5e-26 126.3 1362 24.6
EL10Ac5g12809 Beta vulgaris HOM05D006627 ORTHO05D007753 6.2e-25 120.9 1163 24.7
ECA232G3189 Erigeron canadensis HOM05D006627 ORTHO05D007753 8.1e-25 120.6 1141 24.5
ECA233G6261 Erigeron canadensis HOM05D006627 ORTHO05D007753 1.4e-24 119.8 1201 25.3
THA.LOC104800273 Tarenaya hassleriana HOM05D008661 ORTHO05D010872 3.1e-24 118.6 381 33.9
AUR62027265 Chenopodium quinoa HOM05D006627 ORTHO05D007753 5.8e-23 114.4 1198 25.3
AUR62027266 Chenopodium quinoa HOM05D006627 ORTHO05D007753 5.8e-23 114.4 1192 25.3
Cfa012198 Carpinus fangiana HOM05D006627 ORTHO05D007753 3.7e-22 111.7 1358 23.8
Haze_08819 Corylus avellana HOM05D006627 ORTHO05D007753 4.9e-22 111.3 1369 23.4
Carub.0007s1533 Capsella rubella HOM05D008661 ORTHO05D010872 1.2e-20 106.7 779 26.6
AUR62010719 Chenopodium quinoa HOM05D006627 ORTHO05D007753 1.2e-20 106.7 1214 24.5
Aa31LG3G8880 Aethionema arabicum HOM05D008661 ORTHO05D010872 1.0e-19 103.6 589 29.7
Dinv35243 Davidia involucrata HOM05D006627 ORTHO05D007753 4.3e-18 98.2 512 28.3
EL10Ac3g05437 Beta vulgaris HOM05D006627 ORTHO05D007753 1.4e-16 93.2 1280 23.2
AUR62031403 Chenopodium quinoa HOM05D006627 ORTHO05D007753 1.4e-16 93.2 1300 23.5
unitig_52.g17733 Utricularia gibba HOM05D006627 ORTHO05D007753 1.8e-16 92.8 958 22.5
ATR0661G323 Amborella trichopoda HOM05D006627 ORTHO05D007753 9.9e-15 87.0 398 28.6
Thhalv10024596m.g Eutrema salsugineum HOM05D008661 ORTHO05D010872 1.7e-14 86.3 502 28.5
Dinv37613 Davidia involucrata HOM05D006627 ORTHO05D007753 2.9e-14 85.5 174 35.1
EL10Ac5g12810 Beta vulgaris HOM05D006627 ORTHO05D007753 6.4e-14 84.3 1229 24.9
HanXRQChr13g0394821 Helianthus annuus HOM05D006627 ORTHO05D007753 1.6e-12 79.7 1210 23.0
Sc22g0005410 Simmondsia chinensis HOM05D006627 ORTHO05D007753 2.1e-12 79.3 1307 24.3
Ah.07g196520 Amaranthus hybridus HOM05D006627 ORTHO05D007753 6.0e-12 77.8 1149 23.7
ECA233G3260 Erigeron canadensis HOM05D001089 ORTHO05D000920 6.0e-12 77.8 570 25.6
CARHR233070 Cardamine hirsuta HOM05D008661 ORTHO05D010872 6.6e-11 74.3 586 28.2
ECA238G4706 Erigeron canadensis HOM05D029832 ORTHO05D007753 6.6e-11 74.3 300 30.0
Ah.07g206700 Amaranthus hybridus HOM05D006627 ORTHO05D007753 8.7e-11 73.9 642 26.3
Zm00001eb179470 Zea mays HOM05D006627 ORTHO05D007753 2.8e-09 68.9 295 30.5
BcaC07g38204 Brassica carinata HOM05D008661 ORTHO05D010872 4.7e-09 68.2 466 24.7
BolC8t48627H Brassica oleracea HOM05D008661 ORTHO05D010872 4.7e-09 68.2 466 24.7
THA.LOC104811963 Tarenaya hassleriana HOM05D008661 ORTHO05D010872 6.2e-09 67.8 426 26.3
unitig_52.g17734 Utricularia gibba HOM05D006627 ORTHO05D007753 8.1e-09 67.4 76 55.3
Manes.02G019000 Manihot esculenta HOM05D006627 ORTHO05D007753 1.1e-08 67.0 1213 24.1
Sp7g23680 Schrenkiella parvula HOM05D008661 ORTHO05D010872 1.4e-08 66.6 513 26.7
EL10Ac5g12811 Beta vulgaris HOM05D006627 ORTHO05D007753 1.8e-08 66.2 1371 22.8
AL7G27440 Arabidopsis lyrata HOM05D008661 ORTHO05D010872 2.4e-08 65.9 811 24.2
C08p09590 Brassica napus HOM05D008661 ORTHO05D010872 4.0e-08 65.1 466 24.5
Atru.chr9.2147 Acer truncatum HOM05D006627 ORTHO05D007753 5.3e-08 64.7 607 24.7
A08p21040 Brassica napus HOM05D008661 ORTHO05D010872 2.0e-07 62.8 466 24.5
BraA08t34056Z Brassica rapa HOM05D008661 ORTHO05D010872 2.0e-07 62.8 466 24.5
HanXRQChr09g0252481 Helianthus annuus HOM05D029832 ORTHO05D007753 2.6e-07 62.4 1077 22.5
AL8G26990 Arabidopsis lyrata HOM05D008661 ORTHO05D010872 3.8e-06 58.5 172 32.0
Lsat_1_v5_gn_9_57440 Lactuca sativa HOM05D006627 ORTHO05D007753 3.8e-06 58.5 248 28.6
HPP92_025630 Vanilla planifolia HOM05D006627 ORTHO05D007753 3.8e-06 58.5 732 24.9
A08p21060 Brassica napus HOM05D008661 ORTHO05D010872 8.4e-06 57.4 501 24.2


User provided reference genes

Program Settings