Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G0785 Salvia bowleyana HOM05D005711 ORTHO05D007125 6.4e-146 520.8 271 100.0
SGA_v2.0_scaffold69G23097 Striga asiatica HOM05D005711 ORTHO05D007125 1.3e-26 124.4 137 50.4
MSTRG.6443 Avicennia marina HOM05D005711 ORTHO05D007125 1.7e-26 124.0 137 51.8
GSVIVG01033319001 Vitis vinifera HOM05D005711 ORTHO05D007125 1.7e-26 124.0 138 47.8
Migut.J01777 Erythranthe guttata HOM05D005711 ORTHO05D007125 2.3e-26 123.6 143 49.0
Oeu018003.1 Olea europaea HOM05D005711 ORTHO05D007125 2.5e-25 120.2 138 47.1
HanXRQChr13g0390691 Helianthus annuus HOM05D005711 ORTHO05D007125 2.1e-24 117.1 152 44.1
TAR633G2044 Trochodendron aralioides HOM05D005711 ORTHO05D007125 2.8e-24 116.7 146 44.5
Nitab4.5_0005201g0010 Nicotiana tabacum HOM05D005711 ORTHO05D007125 4.7e-24 115.9 147 42.9
SalBow6G5243 Salvia bowleyana HOM05D005711 ORTHO05D007125 1.1e-23 114.8 71 81.7
Haze_19901 Corylus avellana HOM05D005711 ORTHO05D007125 2.4e-23 113.6 137 44.5
Nitab4.5_0002510g0050 Nicotiana tabacum HOM05D005711 ORTHO05D007125 2.4e-23 113.6 137 43.8
CSS0036262 Camellia sinensis var. sinensis HOM05D005711 ORTHO05D007125 4.0e-23 112.8 137 45.3
DCAR_009055 Daucus carota HOM05D005711 ORTHO05D007125 4.0e-23 112.8 136 46.3
MD05G1111300 Malus domestica HOM05D005711 ORTHO05D007125 5.2e-23 112.5 155 42.6
Lsat_1_v5_gn_5_162580 Lactuca sativa HOM05D005711 ORTHO05D007125 6.8e-23 112.1 140 45.0
PGSC0003DMG402011958 Solanum tuberosum HOM05D005711 ORTHO05D007125 6.8e-23 112.1 147 40.1
Manes.09G026800 Manihot esculenta HOM05D005711 ORTHO05D007125 8.9e-23 111.7 146 43.8
COL.COLO4_28164 Corchorus olitorius HOM05D005711 ORTHO05D007125 1.5e-22 110.9 137 45.3
Cfa016851 Carpinus fangiana HOM05D005711 ORTHO05D007125 2.0e-22 110.5 137 43.1
CiPaw.09G035700 Carya illinoinensis HOM05D005711 ORTHO05D007125 4.4e-22 109.4 149 42.3
Prupe.8G156400 Prunus persica HOM05D005711 ORTHO05D007125 4.4e-22 109.4 137 43.8
Actinidia09354 Actinidia chinensis HOM05D005711 ORTHO05D007125 5.8e-22 109.0 137 45.3
FAN15G2563 Fragaria x ananassa HOM05D005711 ORTHO05D007125 7.6e-22 108.6 153 39.9
PGR004G1983 Punica granatum HOM05D005711 ORTHO05D007125 7.6e-22 108.6 137 43.8
Dinv24132 Davidia involucrata HOM05D005711 ORTHO05D007125 9.9e-22 108.2 137 43.1
CANSAT80G2574 Cannabis sativa HOM05D005711 ORTHO05D007125 1.3e-21 107.8 137 43.1
ECA248G2859 Erigeron canadensis HOM05D005711 ORTHO05D007125 1.3e-21 107.8 162 40.7
Carub.0005s2441 Capsella rubella HOM05D005711 ORTHO05D007125 1.7e-21 107.5 138 42.0
Sabra06G0038400 Salix brachista HOM05D005711 ORTHO05D007125 1.7e-21 107.5 138 42.0
Solyc03g063700.1 Solanum lycopersicum HOM05D005711 ORTHO05D007125 1.7e-21 107.5 147 38.1
THA.LOC104802271 Tarenaya hassleriana HOM05D005711 ORTHO05D007125 1.7e-21 107.5 137 43.1
AL5G39150 Arabidopsis lyrata HOM05D005711 ORTHO05D007125 2.9e-21 106.7 138 42.0
Aa31LG10G12390 Aethionema arabicum HOM05D005711 ORTHO05D007125 4.9e-21 105.9 138 42.0
AT3G57570 Arabidopsis thaliana HOM05D005711 ORTHO05D007125 4.9e-21 105.9 138 42.0
CARHR167810 Cardamine hirsuta HOM05D005711 ORTHO05D007125 4.9e-21 105.9 138 41.3
FAN20G1206 Fragaria x ananassa HOM05D005711 ORTHO05D007125 4.9e-21 105.9 153 39.9
Rhsim03G0016100 Rhododendron simsii HOM05D005711 ORTHO05D007125 6.4e-21 105.5 137 40.9
RcHm_v2.0_Chr6g0247071 Rosa chinensis HOM05D005711 ORTHO05D007125 6.4e-21 105.5 155 40.0
QL07p021385 Quercus lobata HOM05D005711 ORTHO05D007125 1.1e-20 104.8 137 43.1
RcHm_v2.0_Chr7g0177161 Rosa chinensis HOM05D005711 ORTHO05D007125 1.1e-20 104.8 155 40.0
Aqoxy7G01800 Aquilegia oxysepala HOM05D005711 ORTHO05D007125 1.9e-20 104.0 146 43.2
A09p50460 Brassica napus HOM05D005711 ORTHO05D007125 1.9e-20 104.0 137 41.6
BraA09t40497Z Brassica rapa HOM05D005711 ORTHO05D007125 1.9e-20 104.0 137 41.6
Potri.006G054100 Populus trichocarpa HOM05D005711 ORTHO05D007125 1.9e-20 104.0 136 41.2
Rhsim03G0016500 Rhododendron simsii HOM05D005711 ORTHO05D007125 1.9e-20 104.0 137 40.1
TWI53G1199 Tripterygium wilfordii HOM05D005711 ORTHO05D007125 1.9e-20 104.0 136 40.4
Thecc.05G160700 Theobroma cacao HOM05D005711 ORTHO05D007125 2.4e-20 103.6 137 44.5
FvH4_2g02670 Fragaria vesca HOM05D005711 ORTHO05D007125 3.2e-20 103.2 153 38.6
Nn7g36123 Nelumbo nucifera HOM05D005711 ORTHO05D007125 3.2e-20 103.2 137 43.1
Peaxi162Scf00650g00112 Petunia axillaris HOM05D005711 ORTHO05D007125 3.2e-20 103.2 150 38.0
Medtr7g092130 Medicago truncatula HOM05D005711 ORTHO05D007125 5.4e-20 102.4 137 40.9
Cpa.g.sc92.19 Carica papaya HOM05D005711 ORTHO05D007125 7.1e-20 102.1 156 41.7
Duzib093G0922 Durio zibethinus HOM05D005711 ORTHO05D007125 9.2e-20 101.7 137 43.1
Lj2C380T2 Lonicera japonica HOM05D005711 ORTHO05D007125 9.2e-20 101.7 137 42.3
C08p33160 Brassica napus HOM05D005711 ORTHO05D007125 1.6e-19 100.9 138 39.1
BolC8t50918H Brassica oleracea HOM05D005711 ORTHO05D007125 1.6e-19 100.9 138 39.1
arahy.Tifrunner.gnm1.ann1.7A57YA Arachis hypogaea HOM05D005711 ORTHO05D007125 2.1e-19 100.5 137 39.4
arahy.Tifrunner.gnm1.ann1.FZG2LY Arachis hypogaea HOM05D005711 ORTHO05D007125 2.1e-19 100.5 137 39.4
Ciclev10004212m.g Citrus clementina HOM05D005711 ORTHO05D007125 2.1e-19 100.5 156 39.7
Lalb_Chr20g0110821 Lupinus albus HOM05D005711 ORTHO05D007125 2.1e-19 100.5 137 38.7
PSO782G5466 Papaver somniferum HOM05D005711 ORTHO05D007125 2.1e-19 100.5 139 41.7
vmacro07878 Vaccinium macrocarpon HOM05D005711 ORTHO05D007125 2.1e-19 100.5 137 39.4
Ca_08477_v3 Cicer arietinum L. HOM05D005711 ORTHO05D007125 2.7e-19 100.1 137 40.1
FAN24G0778 Fragaria x ananassa HOM05D005711 ORTHO05D007125 2.7e-19 100.1 153 37.3
Eucgr.A02387 Eucalyptus grandis HOM05D005711 ORTHO05D007125 3.5e-19 99.8 137 41.6
Ah.13g076290 Amaranthus hybridus HOM05D005711 ORTHO05D007125 6.0e-19 99.0 144 38.2
AUR62026001 Chenopodium quinoa HOM05D005711 ORTHO05D007125 7.8e-19 98.6 137 39.4
AUR62024408 Chenopodium quinoa HOM05D005711 ORTHO05D007125 1.7e-18 97.4 137 39.4
Sed0005844 Sechium edule HOM05D005711 ORTHO05D007125 2.3e-18 97.1 137 39.4
BcaC07g40361 Brassica carinata HOM05D005711 ORTHO05D007125 3.0e-18 96.7 132 39.4
TPR.G3825 Trifolium pratense HOM05D005711 ORTHO05D007125 5.1e-18 95.9 137 39.4
CDE10G0401 Ceratophyllum demersum HOM05D005711 ORTHO05D007125 1.5e-17 94.4 135 39.3
ATR0605G192 Amborella trichopoda HOM05D005711 ORTHO05D007125 1.9e-17 94.0 138 38.4
Phvul.001G135900 Phaseolus vulgaris HOM05D005711 ORTHO05D007125 1.9e-17 94.0 136 38.2
EL10Ac3g07027 Beta vulgaris HOM05D005711 ORTHO05D007125 2.5e-17 93.6 135 40.7
Cc06_g17000 Coffea canephora HOM05D005711 ORTHO05D007125 2.5e-17 93.6 137 40.9
CsaV3_4G031330 Cucumis sativus L. HOM05D005711 ORTHO05D007125 4.3e-17 92.8 137 35.8
Glyma.19G141900 Glycine max HOM05D005711 ORTHO05D007125 5.6e-17 92.4 137 36.5
Gohir.A01G196500 Gossypium hirsutum HOM05D005711 ORTHO05D007125 7.3e-17 92.0 135 41.5
VMungo1383G1829 Vigna mungo HOM05D005711 ORTHO05D007125 7.3e-17 92.0 137 36.5
Lj1g0025810 Lotus japonicus HOM05D005711 ORTHO05D007125 1.2e-16 91.3 137 38.7
ClCG04G000840 Citrullus lanatus HOM05D005711 ORTHO05D007125 1.6e-16 90.9 138 34.1
Gorai.002G230200 Gossypium raimondii HOM05D005711 ORTHO05D007125 3.6e-16 89.7 135 40.0
MELO3C009042.2 Cucumis melo HOM05D005711 ORTHO05D007125 5.3e-15 85.9 137 32.8
Pp3c13_4080 Physcomitrium patens HOM05D005711 ORTHO05D007125 1.9e-12 77.4 148 34.5
Sc25g0005260 Simmondsia chinensis HOM05D005711 ORTHO05D007125 2.4e-12 77.0 113 39.8
Mapoly0169s0013 Marchantia polymorpha HOM05D005711 ORTHO05D007125 3.2e-12 76.6 139 35.3
SEGI_00323 Sequoiadendron giganteum HOM05D005711 ORTHO05D007125 9.3e-12 75.1 116 39.7
Rhsim05G0135200 Rhododendron simsii HOM05D005711 ORTHO05D007125 4.6e-11 72.8 71 47.9
Psat3g071760 Pisum sativum HOM05D005711 ORTHO05D007125 1.1e-09 68.2 137 33.6
FvH4_7g07941 Fragaria vesca HOM05D005711 ORTHO05D007125 7.6e-06 55.5 88 37.5
FAN01G1916 Fragaria x ananassa HOM05D005711 ORTHO05D007125 7.6e-06 55.5 88 37.5


User provided reference genes

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