Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G0660 Salvia bowleyana HOM05D006359 ORTHO05D007871 3.1e-92 341.7 158 100.0
SalBow4G2166 Salvia bowleyana HOM05D006359 ORTHO05D007871 3.1e-92 341.7 158 100.0
Migut.F00100 Erythranthe guttata HOM05D006359 ORTHO05D007871 6.3e-85 317.4 156 91.7
unitig_0.g2431 Utricularia gibba HOM05D001194 ORTHO05D007871 5.3e-84 314.3 156 89.7
SGA_v2.0_scaffold18G08507 Striga asiatica HOM05D006359 ORTHO05D007871 2.6e-83 312.0 156 89.1
SGA_v2.0_scaffold44G16885 Striga asiatica HOM05D006359 ORTHO05D007871 4.5e-83 311.2 156 89.1
Cc02_g00330 Coffea canephora HOM05D006359 ORTHO05D007871 9.3e-81 303.5 156 86.5
Cpa.g.sc39.69 Carica papaya HOM05D006359 ORTHO05D007871 1.9e-78 295.8 155 83.2
Sopen03g027690 Solanum pennellii HOM05D006359 ORTHO05D007871 1.9e-78 295.8 156 82.7
CSS0011317 Camellia sinensis var. sinensis HOM05D006359 ORTHO05D007871 2.8e-77 292.0 158 81.0
PGSC0003DMG402000567 Solanum tuberosum HOM05D006359 ORTHO05D007871 2.8e-77 292.0 156 82.1
CAN.G303.77 Capsicum annuum HOM05D006359 ORTHO05D007871 1.8e-76 289.3 156 82.7
MELO3C005389.2 Cucumis melo HOM05D006359 ORTHO05D007871 1.8e-76 289.3 157 80.9
CANSAT56G0993 Cannabis sativa HOM05D006359 ORTHO05D007871 3.1e-76 288.5 156 82.7
CsaV3_5G005640 Cucumis sativus L. HOM05D006359 ORTHO05D007871 4.1e-76 288.1 157 81.5
ATR0829G118 Amborella trichopoda HOM05D006359 ORTHO05D007871 1.5e-75 286.2 156 81.4
Lsat_1_v5_gn_3_105561 Lactuca sativa HOM05D006359 ORTHO05D007871 1.5e-75 286.2 156 81.4
Sed0025211 Sechium edule HOM05D006359 ORTHO05D007871 3.4e-75 285.0 157 80.3
TAR375G0743 Trochodendron aralioides HOM05D006359 ORTHO05D007871 3.4e-75 285.0 156 80.1
Sed0002409 Sechium edule HOM05D006359 ORTHO05D007871 5.9e-75 284.3 157 79.6
Actinidia18703 Actinidia chinensis HOM05D006359 ORTHO05D007871 1.3e-74 283.1 155 79.4
Eucgr.K00090 Eucalyptus grandis HOM05D006359 ORTHO05D007871 1.3e-74 283.1 156 77.6
Manes.08G162700 Manihot esculenta HOM05D006359 ORTHO05D007871 1.7e-74 282.7 155 80.0
COL.COLO4_25307 Corchorus olitorius HOM05D006359 ORTHO05D007871 8.5e-74 280.4 156 77.6
PGR042G0220 Punica granatum HOM05D006359 ORTHO05D007871 8.5e-74 280.4 156 79.5
THA.LOC104820881 Tarenaya hassleriana HOM05D006359 ORTHO05D007871 8.5e-74 280.4 155 79.4
HanXRQChr12g0381881 Helianthus annuus HOM05D006359 ORTHO05D007871 1.1e-73 280.0 156 78.8
Phvul.002G039500 Phaseolus vulgaris HOM05D006359 ORTHO05D007871 1.1e-73 280.0 155 80.0
Aqoxy3G02089 Aquilegia oxysepala HOM05D006359 ORTHO05D007871 1.4e-73 279.6 158 76.6
arahy.Tifrunner.gnm1.ann1.K5IGPH Arachis hypogaea HOM05D006359 ORTHO05D007871 1.4e-73 279.6 154 80.5
Glyma.01G228400 Glycine max HOM05D006359 ORTHO05D007871 1.4e-73 279.6 155 78.7
AT3G03100 Arabidopsis thaliana HOM05D006359 ORTHO05D007871 4.2e-73 278.1 153 79.7
arahy.Tifrunner.gnm1.ann1.N39QDT Arachis hypogaea HOM05D006359 ORTHO05D007871 4.2e-73 278.1 154 79.2
CARHR077120 Cardamine hirsuta HOM05D006359 ORTHO05D007871 4.2e-73 278.1 153 79.7
Glyma.11G011200 Glycine max HOM05D006359 ORTHO05D007871 4.2e-73 278.1 155 78.1
Nitab4.5_0011930g0020 Nicotiana tabacum HOM05D006359 ORTHO05D007871 7.2e-73 277.3 156 81.4
Aa31LG5G13580 Aethionema arabicum HOM05D006359 ORTHO05D007871 9.4e-73 276.9 153 79.1
Atru.chr12.1978 Acer truncatum HOM05D006359 ORTHO05D007871 1.2e-72 276.6 155 77.4
AL3G12700 Arabidopsis lyrata HOM05D006359 ORTHO05D007871 1.2e-72 276.6 153 79.7
CiPaw.06G019000 Carya illinoinensis HOM05D006359 ORTHO05D007871 1.2e-72 276.6 154 80.5
Thhalv10021682m.g Eutrema salsugineum HOM05D006359 ORTHO05D007871 1.2e-72 276.6 153 79.7
Carub.0003s0225 Capsella rubella HOM05D006359 ORTHO05D007871 1.6e-72 276.2 153 79.1
EL10Ac3g05084 Beta vulgaris HOM05D006359 ORTHO05D007871 2.1e-72 275.8 156 78.8
AUR62028171 Chenopodium quinoa HOM05D006359 ORTHO05D007871 2.1e-72 275.8 156 77.6
THA.LOC104827217 Tarenaya hassleriana HOM05D006359 ORTHO05D007871 2.1e-72 275.8 155 77.4
BolC1t05848H Brassica oleracea HOM05D006359 ORTHO05D007871 2.7e-72 275.4 153 79.1
BraA01t04593Z Brassica rapa HOM05D006359 ORTHO05D007871 2.7e-72 275.4 153 79.1
Sp3g02140 Schrenkiella parvula HOM05D006359 ORTHO05D007871 2.7e-72 275.4 153 79.1
Thecc.09G264700 Theobroma cacao HOM05D006359 ORTHO05D007871 2.7e-72 275.4 155 77.4
Zm00001eb025210 Zea mays HOM05D006359 ORTHO05D007871 3.6e-72 275.0 156 79.5
Peaxi162Scf00745g00854 Petunia axillaris HOM05D006359 ORTHO05D007871 4.6e-72 274.6 158 79.7
Gohir.D09G101400 Gossypium hirsutum HOM05D006359 ORTHO05D007871 7.9e-72 273.9 153 77.1
Gorai.006G118800 Gossypium raimondii HOM05D006359 ORTHO05D007871 7.9e-72 273.9 153 77.1
GSVIVG01024414001 Vitis vinifera HOM05D006359 ORTHO05D007871 7.9e-72 273.9 154 77.9
Gohir.A09G104700 Gossypium hirsutum HOM05D006359 ORTHO05D007871 1.4e-71 273.1 153 77.1
Cfa015873 Carpinus fangiana HOM05D006359 ORTHO05D007871 2.3e-71 272.3 155 76.8
Duzib168G1989 Durio zibethinus HOM05D006359 ORTHO05D007871 2.3e-71 272.3 153 77.1
ECA246G3947 Erigeron canadensis HOM05D006359 ORTHO05D007871 2.3e-71 272.3 155 75.5
Dinv29162 Davidia involucrata HOM05D006359 ORTHO05D007871 5.1e-71 271.2 148 79.7
Potri.019G051400 Populus trichocarpa HOM05D006359 ORTHO05D007871 5.1e-71 271.2 153 77.8
Prupe.2G325400 Prunus persica HOM05D006359 ORTHO05D007871 5.1e-71 271.2 158 74.7
TPR.G17376 Trifolium pratense HOM05D006359 ORTHO05D007871 6.7e-71 270.8 153 78.4
TPR.G779 Trifolium pratense HOM05D006359 ORTHO05D007871 6.7e-71 270.8 153 78.4
Os10g0579300 Oryza sativa ssp. japonica HOM05D006359 ORTHO05D007871 8.8e-71 270.4 156 78.2
Rhsim09G0212500 Rhododendron simsii HOM05D006359 ORTHO05D007871 1.1e-70 270.0 154 78.6
C05p63700 Brassica napus HOM05D006359 ORTHO05D007871 1.5e-70 269.6 153 77.1
BolC5t35039H Brassica oleracea HOM05D006359 ORTHO05D007871 1.5e-70 269.6 153 77.1
BraSC90t46703Z Brassica rapa HOM05D006359 ORTHO05D007871 1.5e-70 269.6 153 77.1
A05p44080 Brassica napus HOM05D006359 ORTHO05D007871 2.0e-70 269.2 153 77.1
TWI74G0194 Tripterygium wilfordii HOM05D006359 ORTHO05D007871 3.3e-70 268.5 153 76.5
Ca_23151_v3 Cicer arietinum L. HOM05D006359 ORTHO05D007871 5.7e-70 267.7 153 76.5
RcHm_v2.0_Chr1g0384091 Rosa chinensis HOM05D006359 ORTHO05D007871 5.7e-70 267.7 158 75.3
Sabra19G0057200 Salix brachista HOM05D006359 ORTHO05D007871 5.7e-70 267.7 155 74.8
Lalb_Chr05g0211271 Lupinus albus HOM05D006359 ORTHO05D007871 7.4e-70 267.3 155 76.8
FvH4_7g33890 Fragaria vesca HOM05D006359 ORTHO05D007871 9.7e-70 266.9 158 75.3
MD07G1308200 Malus domestica HOM05D006359 ORTHO05D007871 1.3e-69 266.5 156 73.1
PSO782G4768 Papaver somniferum HOM05D006359 ORTHO05D007871 3.7e-69 265.0 156 75.6
Duzib150G0394 Durio zibethinus HOM05D006359 ORTHO05D007871 4.8e-69 264.6 153 74.5
Medtr8g009960 Medicago truncatula HOM05D006359 ORTHO05D007871 4.8e-69 264.6 152 75.0
PSO063G2711 Papaver somniferum HOM05D006359 ORTHO05D007871 4.8e-69 264.6 156 73.7
MD01G1235400 Malus domestica HOM05D006359 ORTHO05D007871 6.3e-69 264.2 156 72.4
FAN03G1870 Fragaria x ananassa HOM05D006359 ORTHO05D007871 1.4e-68 263.1 158 74.7
Lj3g0004693 Lotus japonicus HOM05D006359 ORTHO05D007871 2.4e-68 262.3 157 72.0
Ciclev10022653m.g Citrus clementina HOM05D006359 ORTHO05D007871 5.3e-68 261.2 152 74.3
Zm00001eb224990 Zea mays HOM05D006359 ORTHO05D007871 9.1e-68 260.4 149 78.5
arahy.Tifrunner.gnm1.ann1.0WZ6H1 Arachis hypogaea HOM05D006359 ORTHO05D007871 2.6e-67 258.8 166 70.5
AUR62002057 Chenopodium quinoa HOM05D006359 ORTHO05D007871 2.2e-66 255.8 156 73.1
CDE02G3318 Ceratophyllum demersum HOM05D005498 ORTHO05D006719 1.1e-65 253.4 149 75.2
Nitab4.5_0000021g0410 Nicotiana tabacum HOM05D006359 ORTHO05D007871 1.9e-65 252.7 248 52.4
Hund09785 Selenicereus undatus HOM05D006359 ORTHO05D007871 2.5e-65 252.3 154 73.4
VMungo1215G3178 Vigna mungo HOM05D006359 ORTHO05D007871 2.5e-65 252.3 131 84.0
Sc13g0010840 Simmondsia chinensis HOM05D006359 ORTHO05D007871 5.5e-65 251.1 128 84.4
vmacro10188 Vaccinium macrocarpon HOM05D006359 ORTHO05D007871 5.5e-65 251.1 126 85.7
FAN03G2552 Fragaria x ananassa HOM05D006359 ORTHO05D007871 9.4e-65 250.4 165 71.5
QL09p024508 Quercus lobata HOM05D006359 ORTHO05D007871 4.7e-64 248.1 154 71.4
FAN01G1102 Fragaria x ananassa HOM05D006359 ORTHO05D007871 2.6e-62 242.3 165 69.1
Lj3A888T26 Lonicera japonica HOM05D006359 ORTHO05D007871 5.7e-62 241.1 119 87.4
TPR.G4015 Trifolium pratense HOM05D006359 ORTHO05D007871 1.7e-61 239.6 153 71.2
arahy.Tifrunner.gnm1.ann1.PN0BWC Arachis hypogaea HOM05D006359 ORTHO05D007871 1.4e-55 219.9 122 80.3
CDE11G0363 Ceratophyllum demersum HOM05D006359 ORTHO05D007871 4.0e-55 218.4 119 79.8
HPP92_002578 Vanilla planifolia HOM05D006076 ORTHO05D007871 4.0e-55 218.4 120 79.2
Mapoly0001s0046 Marchantia polymorpha HOM05D006359 ORTHO05D007871 8.8e-55 217.2 152 63.2
Haze_00616 Corylus avellana HOM05D006359 ORTHO05D007871 2.0e-54 216.1 155 65.2
BNapus_Darmor_BZH_scaffold_129p00020 Brassica napus HOM05D006359 ORTHO05D007871 8.2e-53 210.7 118 78.8
Gorai.009G080000 Gossypium raimondii HOM05D006359 ORTHO05D007871 4.1e-52 208.4 154 62.3
ClCG01G005390 Citrullus lanatus HOM05D006359 ORTHO05D007871 9.1e-52 207.2 118 78.0
AagrBONN_evm.TU.Sc2ySwM_344.5152 Anthoceros agrestis HOM05D006359 ORTHO05D007871 2.0e-51 206.1 149 59.1
FAN02G0767 Fragaria x ananassa HOM05D006359 ORTHO05D007871 2.5e-49 199.1 124 72.6
BcaB04g21383 Brassica carinata HOM05D006359 ORTHO05D007871 7.2e-49 197.6 118 76.3
Pp3c16_5910 Physcomitrium patens HOM05D006359 ORTHO05D007871 2.7e-48 195.7 153 55.6
HPP92_002576 Vanilla planifolia HOM05D004915 ORTHO05D006048 1.2e-46 190.3 96 85.4
FAN05G5659 Fragaria x ananassa HOM05D006359 ORTHO05D007871 1.3e-45 186.8 112 76.8
CBR_g23185 Chara braunii HOM05D000019 ORTHO05D000002 9.1e-44 180.6 159 50.9
HPP92_002574 Vanilla planifolia HOM05D004915 ORTHO05D006048 2.7e-43 179.1 93 83.9
Psat4g215600 Pisum sativum HOM05D006359 ORTHO05D007871 1.0e-42 177.2 106 72.6
Nn1g01943 Nelumbo nucifera HOM05D006359 ORTHO05D007871 4.2e-41 171.8 100 77.0
Gohir.A05G075800 Gossypium hirsutum HOM05D006359 ORTHO05D007871 9.5e-41 170.6 154 53.2
SMO331G0004 Selaginella moellendorffii HOM05D006359 ORTHO05D007871 4.4e-38 161.8 104 65.4
Hma1.2p1_0758F.1_g213680 Hydrangea macrophylla HOM05D006359 ORTHO05D007871 7.5e-38 161.0 93 77.4
Hma1.2p1_0758F.1_g213690 Hydrangea macrophylla HOM05D006359 ORTHO05D007871 2.9e-34 149.1 82 80.5
FAN10G1928 Fragaria x ananassa HOM05D006359 ORTHO05D007871 9.5e-33 144.1 80 81.2
Actinidia33791 Actinidia chinensis HOM05D006359 ORTHO05D007871 8.0e-24 114.4 71 71.8
Gohir.D05G078700 Gossypium hirsutum HOM05D001598 ORTHO05D007192 4.1e-20 102.1 58 72.4
Cre11.g467767 Chlamydomonas reinhardtii HOM05D006359 ORTHO05D007871 6.6e-18 94.7 147 34.7
MCO08G302 Micromonas commoda HOM05D006359 ORTHO05D007871 1.9e-17 93.2 111 45.0
vmacro23522 Vaccinium macrocarpon HOM05D006359 ORTHO05D007871 1.9e-17 93.2 46 80.4
Haze_26508 Corylus avellana HOM05D006359 ORTHO05D007871 9.2e-12 74.3 113 39.8
PRCOL_00004481 Prasinoderma coloniale HOM05D006359 ORTHO05D007871 3.0e-10 69.3 125 36.0
VMungo1383G0392 Vigna mungo HOM05D006359 ORTHO05D007871 2.0e-06 56.6 28 89.3


User provided reference genes

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