Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G2472 Salvia bowleyana HOM05D000556 ORTHO05D000404 4.8e-21 103.6 54 100.0
SalBow4G0655 Salvia bowleyana HOM05D002768 ORTHO05D002993 4.8e-21 103.6 54 100.0
SalBow6G5688 Salvia bowleyana HOM05D002768 ORTHO05D002993 5.0e-10 67.0 43 83.7
Migut.J00939 Erythranthe guttata HOM05D002768 ORTHO05D002993 3.3e-09 64.3 43 79.1
Migut.L01551 Erythranthe guttata HOM05D002768 ORTHO05D002993 2.8e-08 61.2 43 74.4
SGA_v2.0_scaffold385G50445 Striga asiatica HOM05D002768 ORTHO05D002993 8.0e-08 59.7 43 72.1
SGA_v2.0_scaffold21G09479 Striga asiatica HOM05D002768 ORTHO05D002993 1.8e-07 58.5 43 69.8
CAN.G461.7 Capsicum annuum HOM05D002768 ORTHO05D002993 2.3e-07 58.2 47 66.0
Oeu039684.1 Olea europaea HOM05D002768 ORTHO05D002993 2.3e-07 58.2 43 72.1
TAR636G1486 Trochodendron aralioides HOM05D002768 ORTHO05D002993 4.0e-07 57.4 41 75.6
Cc01_g18540 Coffea canephora HOM05D002768 ORTHO05D002993 6.8e-07 56.6 43 67.4
Potri.005G221600 Populus trichocarpa HOM05D002768 ORTHO05D002993 6.8e-07 56.6 41 73.2
Solyc06g008520.4 Solanum lycopersicum HOM05D002768 ORTHO05D002993 6.8e-07 56.6 43 69.8
Sopen06g003290 Solanum pennellii HOM05D002768 ORTHO05D002993 6.8e-07 56.6 43 69.8
PGSC0003DMG400010893 Solanum tuberosum HOM05D002768 ORTHO05D002993 6.8e-07 56.6 43 69.8
CSS0010842 Camellia sinensis var. sinensis HOM05D002768 ORTHO05D002993 8.9e-07 56.2 41 73.2
Dinv34595 Davidia involucrata HOM05D002768 ORTHO05D002993 8.9e-07 56.2 41 73.2
Nitab4.5_0000086g0160 Nicotiana tabacum HOM05D002768 ORTHO05D002993 8.9e-07 56.2 43 67.4
TAR365G0069 Trochodendron aralioides HOM05D002768 ORTHO05D002993 8.9e-07 56.2 41 73.2
Actinidia31881 Actinidia chinensis HOM05D002768 ORTHO05D002993 1.5e-06 55.5 41 73.2
Nitab4.5_0011666g0010 Nicotiana tabacum HOM05D002768 ORTHO05D002993 1.5e-06 55.5 42 69.0
Peaxi162Scf00134g01212 Petunia axillaris HOM05D002768 ORTHO05D002993 1.5e-06 55.5 43 67.4
Potri.002G041500 Populus trichocarpa HOM05D002768 ORTHO05D002993 1.5e-06 55.5 41 70.7
CANSAT01G2421 Cannabis sativa HOM05D002768 ORTHO05D002993 2.0e-06 55.1 41 73.2
Eucgr.B01517 Eucalyptus grandis HOM05D002768 ORTHO05D002993 2.0e-06 55.1 41 73.2
HanXRQChr01g0014261 Helianthus annuus HOM05D002768 ORTHO05D002993 2.6e-06 54.7 41 70.7
PSO135G1068 Papaver somniferum HOM05D002768 ORTHO05D002993 2.6e-06 54.7 41 70.7
PSO384G1628 Papaver somniferum HOM05D002768 ORTHO05D002993 2.6e-06 54.7 41 70.7
PGSC0003DMG400031428 Solanum tuberosum HOM05D002768 ORTHO05D002993 2.6e-06 54.7 49 61.2
Lsat_1_v5_gn_5_181681 Lactuca sativa HOM05D002768 ORTHO05D002993 3.4e-06 54.3 41 73.2
Hund09586 Selenicereus undatus HOM05D002768 ORTHO05D002993 3.4e-06 54.3 41 68.3
ClCG07G000890 Citrullus lanatus HOM05D002768 ORTHO05D002993 4.4e-06 53.9 41 70.7
Gohir.A07G211000 Gossypium hirsutum HOM05D002768 ORTHO05D002993 4.4e-06 53.9 41 75.6
Gohir.D07G217000 Gossypium hirsutum HOM05D002768 ORTHO05D002993 4.4e-06 53.9 41 75.6
Gorai.001G251400 Gossypium raimondii HOM05D002768 ORTHO05D002993 4.4e-06 53.9 41 75.6
Sabra05G0170500 Salix brachista HOM05D002768 ORTHO05D002993 4.4e-06 53.9 38 73.7
vmacro20766 Vaccinium macrocarpon HOM05D002768 ORTHO05D002993 4.4e-06 53.9 41 73.2
MBI18_g20354_MAGBIO Magnolia biondii HOM05D002768 ORTHO05D002993 5.8e-06 53.5 41 70.7
TAR542G0003 Trochodendron aralioides HOM05D002768 ORTHO05D002993 5.8e-06 53.5 38 73.7
TAR602G0002 Trochodendron aralioides HOM05D002768 ORTHO05D002993 5.8e-06 53.5 38 73.7
GSVIVG01028292001 Vitis vinifera HOM05D002768 ORTHO05D002993 5.8e-06 53.5 41 68.3
BcaB02g07545 Brassica carinata HOM05D002768 ORTHO05D002993 7.5e-06 53.1 41 68.3


User provided reference genes

Program Settings