Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G0450 Salvia bowleyana HOM05D003765 ORTHO05D004561 8.6e-310 1066.2 570 100.0
SalBow2G1841 Salvia bowleyana HOM05D003765 ORTHO05D004561 5.6e-75 286.2 607 39.0
MSTRG.114 Avicennia marina HOM05D003765 ORTHO05D004561 3.2e-70 270.4 720 35.6
MSTRG.8430 Avicennia marina HOM05D003765 ORTHO05D004561 4.0e-65 253.4 625 35.7
Actinidia13542 Actinidia chinensis HOM05D003765 ORTHO05D004561 1.7e-63 248.1 670 33.4
Migut.F01159 Erythranthe guttata HOM05D003765 ORTHO05D004561 7.8e-61 239.2 616 38.0
SGA_v2.0_scaffold113G31787 Striga asiatica HOM05D003765 ORTHO05D004561 1.1e-59 235.3 625 34.7
Oeu030141.1 Olea europaea HOM05D003765 ORTHO05D004561 1.6e-58 231.5 671 35.3
Potri.012G132900 Populus trichocarpa HOM05D003765 ORTHO05D004561 3.2e-54 217.2 741 32.3
Thecc.03G167000 Theobroma cacao HOM05D003765 ORTHO05D004561 1.2e-53 215.3 707 32.0
Gorai.008G281700 Gossypium raimondii HOM05D003765 ORTHO05D004561 2.7e-53 214.2 694 32.3
Lj1A988T34 Lonicera japonica HOM05D003765 ORTHO05D004561 1.3e-52 211.8 717 31.5
Oeu030257.1 Olea europaea HOM05D003765 ORTHO05D004561 1.7e-52 211.5 685 35.2
Potri.015G135200 Populus trichocarpa HOM05D003765 ORTHO05D004561 1.5e-51 208.4 698 32.7
Gohir.A12G262100 Gossypium hirsutum HOM05D003765 ORTHO05D004561 1.9e-51 208.0 692 30.9
Peaxi162Scf00192g00516 Petunia axillaris HOM05D003765 ORTHO05D004561 5.6e-51 206.5 747 30.9
Sabra15G0147100 Salix brachista HOM05D003765 ORTHO05D004561 7.3e-51 206.1 702 32.5
Peaxi162Scf00557g00216 Petunia axillaris HOM05D003765 ORTHO05D004561 4.7e-50 203.4 688 31.0
Nitab4.5_0000205g0170 Nicotiana tabacum HOM05D003765 ORTHO05D004561 6.9e-49 199.5 723 32.4
MD01G1193200 Malus domestica HOM05D003765 ORTHO05D004561 1.2e-48 198.7 698 30.8
Ciclev10004387m.g Citrus clementina HOM05D003765 ORTHO05D004561 2.0e-48 198.0 713 30.9
Gohir.D12G262800 Gossypium hirsutum HOM05D003765 ORTHO05D004561 4.4e-48 196.8 539 34.1
Cc02_g03580 Coffea canephora HOM05D003765 ORTHO05D004561 1.3e-47 195.3 746 31.8
MD00G1004300 Malus domestica HOM05D003765 ORTHO05D004561 2.9e-47 194.1 695 32.2
FAN10G2022 Fragaria x ananassa HOM05D003765 ORTHO05D004561 3.8e-47 193.7 649 32.0
vmacro06738 Vaccinium macrocarpon HOM05D003765 ORTHO05D004561 6.4e-47 193.0 656 31.1
Migut.F00398 Erythranthe guttata HOM05D003765 ORTHO05D004561 8.4e-47 192.6 269 45.4
FvH4_7g28730 Fragaria vesca HOM05D003765 ORTHO05D004561 1.1e-46 192.2 642 32.1
Cpa.g.sc4.199 Carica papaya HOM05D003765 ORTHO05D004561 1.4e-46 191.8 673 31.9
FAN06G4109 Fragaria x ananassa HOM05D003765 ORTHO05D004561 4.2e-46 190.3 642 31.9
Manes.06G141500 Manihot esculenta HOM05D003765 ORTHO05D004561 4.2e-46 190.3 707 30.4
FAN03G1770 Fragaria x ananassa HOM05D003765 ORTHO05D004561 7.1e-46 189.5 640 32.5
FAN06G1616 Fragaria x ananassa HOM05D003765 ORTHO05D004561 1.2e-45 188.7 642 31.8
RcHm_v2.0_Chr1g0376241 Rosa chinensis HOM05D003765 ORTHO05D004561 2.1e-45 188.0 660 32.7
Duzib084G1451 Durio zibethinus HOM05D003765 ORTHO05D004561 2.7e-45 187.6 677 29.4
FAN03G1055 Fragaria x ananassa HOM05D003765 ORTHO05D004561 2.7e-45 187.6 649 32.0
Rhsim03G0174800 Rhododendron simsii HOM05D003765 ORTHO05D004561 4.6e-45 186.8 608 34.7
Phvul.004G123200 Phaseolus vulgaris HOM05D003765 ORTHO05D004561 5.6e-43 179.9 693 31.7
Lalb_Chr03g0034171 Lupinus albus HOM05D003765 ORTHO05D004561 9.6e-43 179.1 672 30.1
Nitab4.5_0000599g0030 Nicotiana tabacum HOM05D003765 ORTHO05D004561 1.6e-42 178.3 744 30.4
THA.LOC104798744 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 3.6e-42 177.2 617 30.8
Sopen03g002830 Solanum pennellii HOM05D003765 ORTHO05D004561 8.1e-42 176.0 672 30.5
GSVIVG01018447001 Vitis vinifera HOM05D003765 ORTHO05D004561 1.8e-41 174.9 608 34.0
Haze_13790 Corylus avellana HOM05D003765 ORTHO05D004561 4.0e-41 173.7 673 33.6
Sabra12G0100000 Salix brachista HOM05D003765 ORTHO05D004561 4.0e-41 173.7 702 30.8
Prupe.2G287400 Prunus persica HOM05D003765 ORTHO05D004561 6.9e-41 172.9 694 29.7
FAN01G1737 Fragaria x ananassa HOM05D003765 ORTHO05D004561 1.5e-40 171.8 691 30.2
Glyma.16G200400 Glycine max HOM05D003765 ORTHO05D004561 2.0e-40 171.4 700 31.4
Glyma.09G148700 Glycine max HOM05D003765 ORTHO05D004561 3.4e-40 170.6 720 31.7
Nitab4.5_0004911g0030 Nicotiana tabacum HOM05D003765 ORTHO05D004561 7.6e-40 169.5 738 30.8
Atru.chr1.559 Acer truncatum HOM05D003765 ORTHO05D004561 9.9e-40 169.1 759 30.4
Lj5g0012460 Lotus japonicus HOM05D003765 ORTHO05D004561 9.9e-40 169.1 669 30.9
PGSC0003DMG400024251 Solanum tuberosum HOM05D003765 ORTHO05D004561 1.3e-39 168.7 646 30.7
Gohir.D09G174700 Gossypium hirsutum HOM05D003765 ORTHO05D004561 4.9e-39 166.8 649 30.5
Lsat_1_v5_gn_9_53700 Lactuca sativa HOM05D003765 ORTHO05D004561 8.4e-39 166.0 652 30.2
TPR.G21305 Trifolium pratense HOM05D003765 ORTHO05D004561 8.4e-39 166.0 642 30.4
Solyc03g006840.4 Solanum lycopersicum HOM05D003765 ORTHO05D004561 1.4e-38 165.2 684 29.8
Lsat_1_v5_gn_2_130181 Lactuca sativa HOM05D003765 ORTHO05D004561 4.2e-38 163.7 641 31.8
Duzib205G1056 Durio zibethinus HOM05D003765 ORTHO05D004561 9.3e-38 162.5 608 29.4
CiPaw.03G100300 Carya illinoinensis HOM05D003765 ORTHO05D004561 2.1e-37 161.4 721 28.8
Ca_10812_v3 Cicer arietinum L. HOM05D003765 ORTHO05D004561 2.1e-37 161.4 696 28.7
Phvul.007G065400 Phaseolus vulgaris HOM05D003765 ORTHO05D004561 2.7e-37 161.0 706 29.5
THA.LOC104824843 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 2.7e-37 161.0 668 29.2
Gorai.006G196800 Gossypium raimondii HOM05D003765 ORTHO05D004561 3.5e-37 160.6 649 31.3
Lj2g0000316 Lotus japonicus HOM05D003765 ORTHO05D004561 3.5e-37 160.6 708 31.6
Manes.14G030900 Manihot esculenta HOM05D003765 ORTHO05D004561 6.0e-37 159.8 737 28.6
HanXRQChr14g0461811 Helianthus annuus HOM05D003765 ORTHO05D004561 1.0e-36 159.1 626 30.0
Gohir.A09G179400 Gossypium hirsutum HOM05D003765 ORTHO05D004561 3.9e-36 157.1 654 30.3
TPR.G17415 Trifolium pratense HOM05D003765 ORTHO05D004561 8.7e-36 156.0 669 29.6
VMungo0720G0810 Vigna mungo HOM05D003765 ORTHO05D004561 8.7e-36 156.0 708 29.7
THA.LOC104811493 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 1.5e-35 155.2 625 30.7
Aqoxy7G00497 Aquilegia oxysepala HOM05D003765 ORTHO05D004561 7.4e-35 152.9 652 29.1
Sp2g25350 Schrenkiella parvula HOM05D003765 ORTHO05D004561 7.4e-35 152.9 642 28.5
THA.LOC104818268 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 2.1e-34 151.4 665 27.5
Glyma.10G240600 Glycine max HOM05D003765 ORTHO05D004561 2.8e-34 151.0 722 29.9
CANSAT21G2021 Cannabis sativa HOM05D003765 ORTHO05D004561 6.2e-34 149.8 793 28.4
DCAR_014604 Daucus carota HOM05D003765 ORTHO05D004561 6.2e-34 149.8 667 28.8
Medtr6g089530 Medicago truncatula HOM05D003765 ORTHO05D004561 6.2e-34 149.8 670 28.8
TAR629G2057 Trochodendron aralioides HOM05D003765 ORTHO05D004561 4.0e-33 147.1 628 29.0
ECA232G3914 Erigeron canadensis HOM05D003765 ORTHO05D004561 2.0e-32 144.8 593 29.8
Psat1g111440 Pisum sativum HOM05D003765 ORTHO05D004561 2.6e-32 144.4 670 29.0
Glyma.20G154100 Glycine max HOM05D003765 ORTHO05D004561 5.8e-32 143.3 690 28.8
Sed0025435 Sechium edule HOM05D003765 ORTHO05D004561 1.3e-31 142.1 560 30.2
Medtr1g101910 Medicago truncatula HOM05D003765 ORTHO05D004561 3.8e-31 140.6 669 29.4
Eucgr.A02847 Eucalyptus grandis HOM05D003765 ORTHO05D004561 1.9e-30 138.3 697 27.3
Sc19g0001750 Simmondsia chinensis HOM05D003765 ORTHO05D004561 2.4e-30 137.9 628 27.4
BolC3t18736H Brassica oleracea HOM05D003765 ORTHO05D004561 3.2e-30 137.5 635 29.3
Lalb_Chr02g0140881 Lupinus albus HOM05D003765 ORTHO05D004561 5.5e-30 136.7 685 28.9
Nn6g34319 Nelumbo nucifera HOM05D003765 ORTHO05D004561 5.5e-30 136.7 777 26.6
EL10Ac3g05741 Beta vulgaris HOM05D003765 ORTHO05D004561 1.2e-29 135.6 671 26.7
Thhalv10003732m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 1.6e-29 135.2 654 27.5
Lalb_Chr21g0304901 Lupinus albus HOM05D003765 ORTHO05D004561 1.6e-29 135.2 704 29.3
Carub.0008s2285 Capsella rubella HOM05D003765 ORTHO05D004561 2.1e-29 134.8 642 28.2
Dinv35140 Davidia involucrata HOM05D003765 ORTHO05D004561 2.1e-29 134.8 477 33.1
ECA238G0747 Erigeron canadensis HOM05D003765 ORTHO05D004561 2.7e-29 134.4 695 28.2
Nn1g01288 Nelumbo nucifera HOM05D003765 ORTHO05D004561 4.6e-29 133.7 754 25.9
A06p28880 Brassica napus HOM05D003765 ORTHO05D004561 3.0e-28 131.0 640 28.9
BraA06t25836Z Brassica rapa HOM05D003765 ORTHO05D004561 5.1e-28 130.2 641 28.5
ClCG05G007700 Citrullus lanatus HOM05D003765 ORTHO05D004561 1.5e-27 128.6 567 30.9
Dinv28506 Davidia involucrata HOM05D003765 ORTHO05D004561 1.5e-27 128.6 435 32.4
Aa31LG11G1410 Aethionema arabicum HOM05D003765 ORTHO05D004561 4.3e-27 127.1 672 27.1
unitig_37.g11944 Utricularia gibba HOM05D003765 ORTHO05D004561 5.6e-27 126.7 558 31.7
arahy.Tifrunner.gnm1.ann1.S2H83J Arachis hypogaea HOM05D003765 ORTHO05D004561 1.6e-26 125.2 679 27.7
MBI04_g06623_MAGBIO Magnolia biondii HOM05D003765 ORTHO05D004561 6.2e-26 123.2 542 29.2
AL8G38980 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 8.2e-26 122.9 633 26.9
CsaV3_3G016640 Cucumis sativus L. HOM05D003765 ORTHO05D004561 2.4e-25 121.3 588 29.4
Psat6g201640 Pisum sativum HOM05D003765 ORTHO05D004561 5.3e-25 120.2 594 27.6
C03p64740 Brassica napus HOM05D003765 ORTHO05D004561 6.9e-25 119.8 561 28.5
unitig_22.g5225 Utricularia gibba HOM05D003765 ORTHO05D004561 9.0e-25 119.4 522 28.9
CARHR275960 Cardamine hirsuta HOM05D003765 ORTHO05D004561 1.5e-24 118.6 649 28.0
arahy.Tifrunner.gnm1.ann1.G7HECD Arachis hypogaea HOM05D003765 ORTHO05D004561 2.0e-24 118.2 650 28.0
Ah.07g208800 Amaranthus hybridus HOM05D003765 ORTHO05D004561 2.6e-24 117.9 645 26.2
AT5G62170 Arabidopsis thaliana HOM05D003765 ORTHO05D004561 3.4e-24 117.5 574 28.0
PGR042G0955 Punica granatum HOM05D003765 ORTHO05D004561 4.5e-24 117.1 696 27.0
Hma1.2p1_0488F.1_g163950 Hydrangea macrophylla HOM05D003765 ORTHO05D004561 8.4e-23 112.8 566 28.3
PSO478G3102 Papaver somniferum HOM05D003765 ORTHO05D004561 1.4e-22 112.1 673 27.5
Thhalv10012958m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 1.9e-22 111.7 624 27.6
MELO3C006859.2 Cucumis melo HOM05D003765 ORTHO05D004561 2.5e-22 111.3 587 28.8
Sp6g14100 Schrenkiella parvula HOM05D003765 ORTHO05D004561 5.5e-22 110.2 639 26.4
AL8G26150 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 7.1e-22 109.8 597 28.1
Sed0026899 Sechium edule HOM05D003765 ORTHO05D004561 1.2e-21 109.0 508 28.7
PSO782G0143 Papaver somniferum HOM05D003765 ORTHO05D004561 2.1e-21 108.2 668 27.2
AUR62016059 Chenopodium quinoa HOM05D003765 ORTHO05D004561 1.3e-20 105.5 555 26.1
DCAR_009410 Daucus carota HOM05D003765 ORTHO05D004561 1.8e-20 105.1 639 27.9
Thhalv10025080m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 8.7e-20 102.8 346 33.2
Aa31LG3G8290 Aethionema arabicum HOM05D003765 ORTHO05D004561 1.5e-19 102.1 643 26.0
COL.COLO4_14229 Corchorus olitorius HOM05D003765 ORTHO05D004561 1.9e-19 101.7 676 27.2
AT5G51850 Arabidopsis thaliana HOM05D003765 ORTHO05D004561 9.7e-19 99.4 597 27.6
BcaB03g12466 Brassica carinata HOM05D003765 ORTHO05D004561 9.7e-19 99.4 424 29.2
BcaC07g38188 Brassica carinata HOM05D003765 ORTHO05D004561 9.7e-19 99.4 395 29.6
A10p09680 Brassica napus HOM05D003765 ORTHO05D004561 6.3e-18 96.7 227 37.0
BolC8t48608H Brassica oleracea HOM05D003765 ORTHO05D004561 6.3e-18 96.7 395 29.6
VMungo0464G2043 Vigna mungo HOM05D003765 ORTHO05D004561 8.2e-18 96.3 235 34.0
CDE04G3755 Ceratophyllum demersum HOM05D003765 ORTHO05D004561 1.4e-17 95.5 675 25.8
BraA10t43049Z Brassica rapa HOM05D003765 ORTHO05D004561 3.1e-17 94.4 227 36.6
HanXRQChr15g0486221 Helianthus annuus HOM05D003765 ORTHO05D004561 4.1e-17 94.0 422 28.0
VMungo0464G1637 Vigna mungo HOM05D003765 ORTHO05D004561 1.5e-16 92.0 206 38.8
A08p21190 Brassica napus HOM05D003765 ORTHO05D004561 4.5e-16 90.5 349 29.5
BraA08t34069Z Brassica rapa HOM05D003765 ORTHO05D004561 4.5e-16 90.5 349 29.5
BcaB08g35538 Brassica carinata HOM05D003765 ORTHO05D004561 5.9e-16 90.1 239 33.9
C09p41340 Brassica napus HOM05D003765 ORTHO05D004561 7.6e-16 89.7 236 34.3
BolC9t57009H Brassica oleracea HOM05D003765 ORTHO05D004561 7.6e-16 89.7 236 34.3
ATR0661G439 Amborella trichopoda HOM05D003765 ORTHO05D004561 1.1e-14 85.9 163 34.4
Sp7g23450 Schrenkiella parvula HOM05D003765 ORTHO05D004561 1.4e-14 85.5 405 29.6
CARHR264740 Cardamine hirsuta HOM05D003765 ORTHO05D004561 1.9e-14 85.1 578 25.4
AT4G25430 Arabidopsis thaliana HOM05D003765 ORTHO05D023707 1.4e-12 79.0 352 29.8
Os04g0106500 Oryza sativa ssp. japonica HOM05D003765 ORTHO05D004561 3.9e-12 77.4 500 24.6
Dinv28507 Davidia involucrata HOM05D003765 ORTHO05D004561 5.1e-12 77.0 153 34.6
Carub.0008s1189 Capsella rubella HOM05D003765 ORTHO05D004561 1.1e-11 75.9 488 25.8
CDE07G1851 Ceratophyllum demersum HOM05D003765 ORTHO05D004561 4.3e-11 73.9 191 35.6
AUR62021267 Chenopodium quinoa HOM05D003765 ORTHO05D004561 9.7e-11 72.8 380 28.7
CsaV3_5G005590 Cucumis sativus L. HOM05D003765 ORTHO05D004561 2.2e-10 71.6 294 31.6
Carub.0007s1558 Capsella rubella HOM05D003765 ORTHO05D004561 3.7e-10 70.9 322 30.4
ClCG01G005340 Citrullus lanatus HOM05D003765 ORTHO05D004561 3.7e-10 70.9 287 32.1
Duzib168G0968 Durio zibethinus HOM05D002515 ORTHO05D002722 4.1e-09 67.4 163 28.2
Lalb_Chr19g0131141 Lupinus albus HOM05D003765 ORTHO05D004561 4.1e-09 67.4 128 36.7
arahy.Tifrunner.gnm1.ann1.XAW92V Arachis hypogaea HOM05D003765 ORTHO05D004561 3.4e-08 64.3 186 35.5
FAN16G3741 Fragaria x ananassa HOM05D002515 ORTHO05D002722 3.4e-08 64.3 162 27.2
HanXRQChr17g0546021 Helianthus annuus HOM05D001693 ORTHO05D001588 3.4e-08 64.3 157 30.6
Hund04961 Selenicereus undatus HOM05D002515 ORTHO05D002722 3.4e-08 64.3 171 26.3
SEGI_17592 Sequoiadendron giganteum HOM05D003765 ORTHO05D004561 4.5e-08 63.9 174 27.6
Prupe.6G078200 Prunus persica HOM05D002515 ORTHO05D002722 5.9e-08 63.5 204 25.5
Gorai.009G099300 Gossypium raimondii HOM05D002515 ORTHO05D002722 7.7e-08 63.2 159 27.7
Gohir.D05G096000 Gossypium hirsutum HOM05D002515 ORTHO05D002722 1.0e-07 62.8 159 27.7
arahy.Tifrunner.gnm1.ann1.3X1084 Arachis hypogaea HOM05D003765 ORTHO05D004561 2.2e-07 61.6 726 24.1
BcaB02g09632 Brassica carinata HOM05D003765 ORTHO05D004561 2.2e-07 61.6 463 25.5
Gohir.A05G095700 Gossypium hirsutum HOM05D002515 ORTHO05D002722 2.9e-07 61.2 164 27.4
SEGI_39803 Sequoiadendron giganteum HOM05D002769 ORTHO05D003160 5.0e-07 60.5 185 28.1
HPP92_022139 Vanilla planifolia HOM05D003765 ORTHO05D004561 8.5e-07 59.7 568 24.1
Thecc.09G300700 Theobroma cacao HOM05D002515 ORTHO05D002722 1.4e-06 58.9 161 26.7
AL7G27690 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 2.5e-06 58.2 401 25.9
ECA246G4455 Erigeron canadensis HOM05D001693 ORTHO05D001588 2.5e-06 58.2 214 26.2
BraA09t36408Z Brassica rapa HOM05D003765 ORTHO05D004561 4.2e-06 57.4 123 38.2
HPP92_022144 Vanilla planifolia HOM05D003765 ORTHO05D004561 5.5e-06 57.0 571 24.0
Aa31LG6G8690 Aethionema arabicum HOM05D003765 ORTHO05D004561 7.2e-06 56.6 285 28.4
A09p07540 Brassica napus HOM05D003765 ORTHO05D004561 7.2e-06 56.6 226 29.6
Peaxi162Scf00774g00001 Petunia axillaris HOM05D002515 ORTHO05D002722 7.2e-06 56.6 204 26.5
Duzib211G0696 Durio zibethinus HOM05D002769 ORTHO05D003160 9.4e-06 56.2 179 29.6


User provided reference genes

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