Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G0311 Salvia bowleyana HOM05D006027 ORTHO05D007604 2.3e-60 235.3 116 100.0
SGA_v2.0_scaffold1G00660 Striga asiatica HOM05D006027 ORTHO05D007604 8.2e-58 226.9 116 94.8
Oeu052083.1 Olea europaea HOM05D006027 ORTHO05D007604 5.8e-56 220.7 116 92.2
Migut.D00479 Erythranthe guttata HOM05D006027 ORTHO05D007604 7.6e-56 220.3 116 92.2
Oeu015437.1 Olea europaea HOM05D006027 ORTHO05D007604 4.9e-55 217.6 116 90.5
QL09p041558 Quercus lobata HOM05D006027 ORTHO05D007604 1.1e-54 216.5 115 88.7
Gohir.A07G152700 Gossypium hirsutum HOM05D006027 ORTHO05D007604 1.4e-54 216.1 116 90.5
Gohir.D07G158900 Gossypium hirsutum HOM05D006027 ORTHO05D007604 1.4e-54 216.1 116 90.5
CANSAT01G0515 Cannabis sativa HOM05D006027 ORTHO05D007604 1.9e-54 215.7 116 89.7
CANSAT01G2333 Cannabis sativa HOM05D006027 ORTHO05D007604 1.9e-54 215.7 116 89.7
Sabra02G0194900 Salix brachista HOM05D006027 ORTHO05D007604 1.9e-54 215.7 116 89.7
Cc01_g17770 Coffea canephora HOM05D006027 ORTHO05D007604 3.2e-54 214.9 116 89.7
Haze_24710 Corylus avellana HOM05D006027 ORTHO05D007604 3.2e-54 214.9 116 88.8
Lj1C74G4 Lonicera japonica HOM05D006027 ORTHO05D007604 3.2e-54 214.9 115 90.4
Dinv43066 Davidia involucrata HOM05D006027 ORTHO05D007604 5.5e-54 214.2 116 88.8
Gorai.001G182100 Gossypium raimondii HOM05D006027 ORTHO05D007604 5.5e-54 214.2 116 89.7
Cfa002488 Carpinus fangiana HOM05D006027 ORTHO05D007604 1.2e-53 213.0 116 87.9
Potri.002G256400 Populus trichocarpa HOM05D006027 ORTHO05D007604 1.2e-53 213.0 116 87.9
unitig_8.g3074 Utricularia gibba HOM05D006027 ORTHO05D007604 1.2e-53 213.0 116 86.2
MELO3C022393.2 Cucumis melo HOM05D006027 ORTHO05D007604 1.6e-53 212.6 116 86.2
TAR362G0914 Trochodendron aralioides HOM05D006027 ORTHO05D007604 2.1e-53 212.2 116 87.9
Sed0007731 Sechium edule HOM05D006027 ORTHO05D007604 2.7e-53 211.8 113 88.5
Actinidia23700 Actinidia chinensis HOM05D006027 ORTHO05D007604 3.5e-53 211.5 116 87.1
CSS0010160 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 4.6e-53 211.1 116 87.1
ClCG06G001400 Citrullus lanatus HOM05D006027 ORTHO05D007604 4.6e-53 211.1 116 85.3
Thecc.01G249800 Theobroma cacao HOM05D006027 ORTHO05D007604 4.6e-53 211.1 116 87.9
Aqoxy5G00130 Aquilegia oxysepala HOM05D006027 ORTHO05D007604 6.1e-53 210.7 116 87.1
Phvul.007G153500 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 6.1e-53 210.7 116 87.1
VMungo0720G1620 Vigna mungo HOM05D006027 ORTHO05D007604 6.1e-53 210.7 116 87.1
CAN.G536.12 Capsicum annuum HOM05D006027 ORTHO05D007604 7.9e-53 210.3 116 87.9
Eucgr.K01424 Eucalyptus grandis HOM05D006027 ORTHO05D007604 7.9e-53 210.3 116 87.1
Nitab4.5_0002435g0010 Nicotiana tabacum HOM05D006027 ORTHO05D007604 7.9e-53 210.3 116 87.9
CSS0012566 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 1.0e-52 209.9 116 86.2
DCAR_000568 Daucus carota HOM05D006027 ORTHO05D007604 1.0e-52 209.9 116 86.2
Duzib138G0534 Durio zibethinus HOM05D006027 ORTHO05D007604 1.0e-52 209.9 116 87.1
Lalb_Chr06g0170731 Lupinus albus HOM05D006027 ORTHO05D007604 1.0e-52 209.9 116 87.1
Nn3g19801 Nelumbo nucifera HOM05D006027 ORTHO05D007604 1.0e-52 209.9 116 86.2
Nitab4.5_0000845g0140 Nicotiana tabacum HOM05D006027 ORTHO05D007604 1.0e-52 209.9 116 87.9
GSVIVG01028434001 Vitis vinifera HOM05D006027 ORTHO05D007604 1.0e-52 209.9 116 85.3
Duzib211G0648 Durio zibethinus HOM05D006027 ORTHO05D007604 1.3e-52 209.5 116 86.2
FAN15G2830 Fragaria x ananassa HOM05D006027 ORTHO05D007604 1.3e-52 209.5 116 87.1
MD10G1176000 Malus domestica HOM05D006027 ORTHO05D007604 1.8e-52 209.1 116 87.1
Manes.12G038000 Manihot esculenta HOM05D006027 ORTHO05D007604 1.8e-52 209.1 116 87.1
Peaxi162Scf00043g00255 Petunia axillaris HOM05D006027 ORTHO05D007604 1.8e-52 209.1 116 87.9
Rhsim01G0260300 Rhododendron simsii HOM05D006027 ORTHO05D007604 2.3e-52 208.8 116 86.2
Sopen09g025650 Solanum pennellii HOM05D006027 ORTHO05D007604 2.3e-52 208.8 116 87.1
PGSC0003DMG400008585 Solanum tuberosum HOM05D006027 ORTHO05D007604 2.3e-52 208.8 116 87.1
FAN27G2528 Fragaria x ananassa HOM05D006027 ORTHO05D007604 3.0e-52 208.4 116 87.1
Glyma.10G040600 Glycine max HOM05D006027 ORTHO05D007604 3.0e-52 208.4 116 86.2
Glyma.13G127200 Glycine max HOM05D006027 ORTHO05D007604 3.0e-52 208.4 116 85.3
Atru.chr5.1865 Acer truncatum HOM05D006027 ORTHO05D007604 3.9e-52 208.0 116 84.5
Lalb_Chr02g0152741 Lupinus albus HOM05D006027 ORTHO05D007604 3.9e-52 208.0 116 85.3
MD05G1188500 Malus domestica HOM05D006027 ORTHO05D007604 3.9e-52 208.0 116 86.2
COL.COLO4_10205 Corchorus olitorius HOM05D006027 ORTHO05D007604 5.1e-52 207.6 114 86.8
Prupe.8G215000 Prunus persica HOM05D006027 ORTHO05D007604 5.1e-52 207.6 116 86.2
arahy.Tifrunner.gnm1.ann1.72UZ71 Arachis hypogaea HOM05D006027 ORTHO05D007604 6.7e-52 207.2 116 85.3
arahy.Tifrunner.gnm1.ann1.FRV526 Arachis hypogaea HOM05D006027 ORTHO05D007604 6.7e-52 207.2 116 85.3
Manes.13G039500 Manihot esculenta HOM05D006027 ORTHO05D007604 6.7e-52 207.2 116 85.3
Solyc09g064500.3 Solanum lycopersicum HOM05D006027 ORTHO05D007604 6.7e-52 207.2 116 86.2
vmacro14793 Vaccinium macrocarpon HOM05D006027 ORTHO05D007604 8.7e-52 206.8 116 84.5
Actinidia09513 Actinidia chinensis HOM05D006027 ORTHO05D007604 1.5e-51 206.1 116 84.5
Phvul.001G165200 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 1.5e-51 206.1 116 83.6
PGR044G2038 Punica granatum HOM05D006027 ORTHO05D007604 1.9e-51 205.7 115 85.2
TWI18G0031 Tripterygium wilfordii HOM05D006027 ORTHO05D007604 1.9e-51 205.7 116 82.8
TAR633G0397 Trochodendron aralioides HOM05D006027 ORTHO05D007604 2.5e-51 205.3 116 84.5
CDE02G4364 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 3.3e-51 204.9 116 83.6
Os01g0938100 Oryza sativa ssp. japonica HOM05D006027 ORTHO05D007604 4.3e-51 204.5 116 84.5
Ca_09646_v3 Cicer arietinum L. HOM05D006027 ORTHO05D007604 5.7e-51 204.1 114 86.0
FvH4_2g20470 Fragaria vesca HOM05D006027 ORTHO05D007604 7.4e-51 203.8 116 85.3
FAN24G3422 Fragaria x ananassa HOM05D006027 ORTHO05D007604 7.4e-51 203.8 116 85.3
Medtr1g069465 Medicago truncatula HOM05D006027 ORTHO05D007604 7.4e-51 203.8 114 85.1
PSO764G0320 Papaver somniferum HOM05D006027 ORTHO05D007604 1.3e-50 203.0 116 81.9
MBI07_g08912_MAGBIO Magnolia biondii HOM05D006027 ORTHO05D007604 1.6e-50 202.6 116 82.8
Zm00001eb141830 Zea mays HOM05D006027 ORTHO05D007604 2.2e-50 202.2 114 84.2
Zm00001eb141870 Zea mays HOM05D006027 ORTHO05D007604 2.2e-50 202.2 114 84.2
TPR.G5919 Trifolium pratense HOM05D006027 ORTHO05D007604 2.8e-50 201.8 114 84.2
VMungo1383G1953 Vigna mungo HOM05D006027 ORTHO05D007604 2.8e-50 201.8 116 81.9
EL10Ac7g17691 Beta vulgaris HOM05D006027 ORTHO05D007604 6.3e-50 200.7 116 81.0
HanXRQChr01g0014971 Helianthus annuus HOM05D006027 ORTHO05D007604 6.3e-50 200.7 115 82.6
ECA248G3782 Erigeron canadensis HOM05D006027 ORTHO05D007604 1.1e-49 199.9 115 82.6
Lj5g0017558 Lotus japonicus HOM05D006027 ORTHO05D007604 1.1e-49 199.9 116 82.8
AUR62025437 Chenopodium quinoa HOM05D006027 ORTHO05D007604 1.8e-49 199.1 116 82.8
Psat6g062520 Pisum sativum HOM05D006027 ORTHO05D007604 1.8e-49 199.1 114 83.3
Lsat_1_v5_gn_5_181161 Lactuca sativa HOM05D006027 ORTHO05D007604 3.1e-49 198.4 115 80.9
PSO832G0858 Papaver somniferum HOM05D006027 ORTHO05D007604 3.1e-49 198.4 116 80.2
Cpa.g.sc87.33 Carica papaya HOM05D006027 ORTHO05D007604 4.1e-49 198.0 115 82.6
AUR62008802 Chenopodium quinoa HOM05D006027 ORTHO05D007604 4.1e-49 198.0 116 81.9
Sp7g26630 Schrenkiella parvula HOM05D006027 ORTHO05D007604 5.3e-49 197.6 115 79.1
Aa31LG2G21720 Aethionema arabicum HOM05D006027 ORTHO05D007604 6.9e-49 197.2 115 79.1
Carub.0007s1200 Capsella rubella HOM05D006027 ORTHO05D007604 9.0e-49 196.8 116 77.6
Thhalv10026347m.g Eutrema salsugineum HOM05D006027 ORTHO05D007604 9.0e-49 196.8 115 78.3
THA.LOC104814531 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 9.0e-49 196.8 116 78.4
C01p10860 Brassica napus HOM05D006027 ORTHO05D007604 1.2e-48 196.4 115 78.3
BraA01t00872Z Brassica rapa HOM05D006027 ORTHO05D007604 1.2e-48 196.4 115 78.3
C07p56360 Brassica napus HOM05D006027 ORTHO05D007604 1.5e-48 196.1 115 78.3
BolC7t46115H Brassica oleracea HOM05D006027 ORTHO05D007604 1.5e-48 196.1 115 78.3
BcaC06g32609 Brassica carinata HOM05D006027 ORTHO05D007604 2.0e-48 195.7 115 78.3
CARHR236440 Cardamine hirsuta HOM05D006027 ORTHO05D007604 2.0e-48 195.7 116 78.4
A01p09280 Brassica napus HOM05D006027 ORTHO05D007604 3.4e-48 194.9 114 78.1
AL7G23880 Arabidopsis lyrata HOM05D006027 ORTHO05D007604 4.5e-48 194.5 115 77.4
BcaNung04696 Brassica carinata HOM05D006027 ORTHO05D007604 4.5e-48 194.5 115 77.4
A03p58340 Brassica napus HOM05D006027 ORTHO05D007604 4.5e-48 194.5 115 77.4
AT4G28660 Arabidopsis thaliana HOM05D006027 ORTHO05D007604 7.7e-48 193.7 115 77.4
HPP92_027289 Vanilla planifolia HOM05D006027 ORTHO05D007604 7.7e-48 193.7 116 77.6
THA.LOC104820068 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 1.3e-47 193.0 116 78.4
ATR0787G157 Amborella trichopoda HOM05D006027 ORTHO05D007604 2.2e-47 192.2 115 79.1
Hund18287 Selenicereus undatus HOM05D006027 ORTHO05D007604 1.9e-46 189.1 116 78.4
Sc05g0002880 Simmondsia chinensis HOM05D006027 ORTHO05D007604 9.4e-46 186.8 102 89.2
HPP92_008468 Vanilla planifolia HOM05D006027 ORTHO05D007604 1.6e-45 186.0 116 76.7
BolC1t01050H Brassica oleracea HOM05D000022 ORTHO05D000744 7.9e-45 183.7 108 77.8
Ciclev10022322m.g Citrus clementina HOM05D006027 ORTHO05D007604 2.3e-44 182.2 103 83.5
Mapoly0042s0085 Marchantia polymorpha HOM05D006027 ORTHO05D007604 7.4e-43 177.2 112 74.1
SMO347G0509 Selaginella moellendorffii HOM05D006027 ORTHO05D007604 2.6e-40 168.7 115 70.4
Pp3c7_5450 Physcomitrium patens HOM05D006027 ORTHO05D007604 3.4e-40 168.3 116 67.2
AagrBONN_evm.TU.Sc2ySwM_340.224 Anthoceros agrestis HOM05D006027 ORTHO05D007604 2.9e-39 165.2 109 69.7
Pp3c11_18280 Physcomitrium patens HOM05D006027 ORTHO05D007604 4.2e-38 161.4 116 62.9
MCO16G336 Micromonas commoda HOM05D006027 ORTHO05D007604 6.1e-37 157.5 110 61.8
CBR_g12742 Chara braunii HOM05D006027 ORTHO05D007604 5.7e-35 151.0 110 60.9
Ah.15g092630 Amaranthus hybridus HOM05D006027 ORTHO05D007604 9.7e-35 150.2 109 69.7
PRCOL_00005949 Prasinoderma coloniale HOM05D006027 ORTHO05D007604 3.1e-33 145.2 106 60.4
CiPaw.03G271300 Carya illinoinensis HOM05D006027 ORTHO05D007604 7.0e-33 144.1 116 65.5
Cre10.g440450 Chlamydomonas reinhardtii HOM05D006027 ORTHO05D007604 9.1e-33 143.7 109 59.6
Zm00001eb141750 Zea mays HOM05D006027 ORTHO05D007604 1.9e-22 109.4 59 84.7
Zm00001eb141790 Zea mays HOM05D006027 ORTHO05D007604 1.9e-22 109.4 59 84.7
CSS0017427 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 1.4e-20 103.2 106 56.6
TAR362G0025 Trochodendron aralioides HOM05D006027 ORTHO05D007604 6.3e-18 94.4 55 83.6
Zm00001eb141760 Zea mays HOM05D006027 ORTHO05D007604 1.5e-14 83.2 49 79.6
CDE09G0356 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 1.5e-11 73.2 41 80.5
RcHm_v2.0_Chr6g0286561 Rosa chinensis HOM05D006027 ORTHO05D007604 1.4e-09 66.6 36 86.1


User provided reference genes

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