Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G0279 Salvia bowleyana HOM05D005681 ORTHO05D007274 4.0e-157 558.1 301 100.0
MSTRG.25900 Avicennia marina HOM05D005681 ORTHO05D007274 5.6e-127 458.0 301 76.7
SGA_v2.0_scaffold243G44291 Striga asiatica HOM05D005681 ORTHO05D007274 5.6e-127 458.0 317 75.4
Dinv30262 Davidia involucrata HOM05D005681 ORTHO05D007274 1.1e-125 453.8 301 76.7
Nitab4.5_0000052g0240 Nicotiana tabacum HOM05D005681 ORTHO05D007274 9.0e-125 450.7 304 77.3
Cc08_g09110 Coffea canephora HOM05D005681 ORTHO05D007274 7.6e-124 447.6 303 74.3
Hma1.2p1_0140F.1_g063453 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 7.6e-124 447.6 301 74.4
Hma1.2p1_0140F.1_g063456 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 7.6e-124 447.6 301 74.4
Migut.A00229 Erythranthe guttata HOM05D005681 ORTHO05D007274 1.3e-123 446.8 302 74.8
Nitab4.5_0011506g0010 Nicotiana tabacum HOM05D005681 ORTHO05D007274 2.9e-123 445.7 304 77.0
Peaxi162Scf00523g00017 Petunia axillaris HOM05D005681 ORTHO05D007274 3.5e-121 438.7 300 74.0
Sopen08g022200 Solanum pennellii HOM05D005681 ORTHO05D007274 7.9e-121 437.6 308 71.8
CAN.G21.34 Capsicum annuum HOM05D005681 ORTHO05D007274 1.3e-120 436.8 308 72.1
Solyc08g068350.3 Solanum lycopersicum HOM05D005681 ORTHO05D007274 1.3e-120 436.8 305 72.1
PGSC0003DMG400010842 Solanum tuberosum HOM05D005681 ORTHO05D007274 3.3e-119 432.2 308 74.4
TAR626G1886 Trochodendron aralioides HOM05D005681 ORTHO05D007274 4.3e-119 431.8 301 71.4
Gorai.010G110300 Gossypium raimondii HOM05D005681 ORTHO05D007274 2.2e-118 429.5 301 71.1
Gohir.A06G095700 Gossypium hirsutum HOM05D005681 ORTHO05D007274 2.4e-117 426.0 301 70.4
Dinv14236 Davidia involucrata HOM05D005681 ORTHO05D007274 5.9e-116 421.4 302 72.5
Duzib150G0332 Durio zibethinus HOM05D005681 ORTHO05D007274 5.9e-116 421.4 301 70.8
QL12p029589 Quercus lobata HOM05D005681 ORTHO05D007274 7.6e-116 421.0 299 70.6
Actinidia13315 Actinidia chinensis HOM05D005681 ORTHO05D007274 1.3e-115 420.2 302 72.2
Actinidia31229 Actinidia chinensis HOM05D005681 ORTHO05D007274 2.9e-115 419.1 302 71.2
Lsat_1_v5_gn_5_33341 Lactuca sativa HOM05D005681 ORTHO05D007274 5.0e-115 418.3 302 69.9
Manes.03G061300 Manihot esculenta HOM05D005681 ORTHO05D007274 6.5e-115 417.9 302 69.9
Ciclev10009066m.g Citrus clementina HOM05D005681 ORTHO05D007274 1.4e-114 416.8 302 68.5
PGR044G0773 Punica granatum HOM05D005681 ORTHO05D007274 1.4e-114 416.8 301 68.4
Atru.chr7.2148 Acer truncatum HOM05D005681 ORTHO05D007274 4.2e-114 415.2 301 70.1
Gohir.A05G047800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 7.2e-114 414.5 301 67.8
TWI32G1178 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 2.1e-113 412.9 302 70.2
CSS0039623 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 2.7e-113 412.5 303 69.6
THA.LOC104803765 Tarenaya hassleriana HOM05D005681 ORTHO05D007274 2.7e-113 412.5 303 69.0
Lj1g0012145 Lotus japonicus HOM05D005681 ORTHO05D007274 4.6e-113 411.8 301 69.1
Thecc.09G041100 Theobroma cacao HOM05D005681 ORTHO05D007274 6.1e-113 411.4 301 69.4
Gorai.009G051200 Gossypium raimondii HOM05D005681 ORTHO05D007274 1.4e-112 410.2 301 67.1
Gohir.D05G049900 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.8e-112 409.8 301 67.1
CiPaw.08G024200 Carya illinoinensis HOM05D005681 ORTHO05D007274 5.1e-112 408.3 303 67.7
Glyma.04G080900 Glycine max HOM05D005681 ORTHO05D007274 6.7e-112 407.9 301 67.4
Rhsim07G0152800 Rhododendron simsii HOM05D005681 ORTHO05D007274 8.8e-112 407.5 300 70.7
Glyma.06G082600 Glycine max HOM05D005681 ORTHO05D007274 1.1e-111 407.1 301 67.8
Ca_15613_v3 Cicer arietinum L. HOM05D005681 ORTHO05D007274 3.3e-111 405.6 301 67.4
GSVIVG01035659001 Vitis vinifera HOM05D005681 ORTHO05D007274 5.7e-111 404.8 298 66.8
VMungo1309G2636 Vigna mungo HOM05D005681 ORTHO05D007274 1.3e-110 403.7 303 68.0
PSO566G0344 Papaver somniferum HOM05D005681 ORTHO05D007274 2.2e-110 402.9 302 68.5
Psat0s2259g0040 Pisum sativum HOM05D005681 ORTHO05D007274 3.7e-110 402.1 301 66.1
PSO782G3698 Papaver somniferum HOM05D005681 ORTHO05D007274 1.1e-109 400.6 302 68.5
vmacro05364 Vaccinium macrocarpon HOM05D005681 ORTHO05D007274 1.8e-109 399.8 282 72.7
arahy.Tifrunner.gnm1.ann1.M4G12U Arachis hypogaea HOM05D005681 ORTHO05D007274 2.4e-109 399.4 300 65.3
EL10Ac2g04057 Beta vulgaris HOM05D005681 ORTHO05D007274 2.4e-109 399.4 300 66.7
AL7G19000 Arabidopsis lyrata HOM05D005681 ORTHO05D007274 5.3e-109 398.3 300 68.0
Potri.006G241200 Populus trichocarpa HOM05D005681 ORTHO05D007274 5.3e-109 398.3 301 67.8
TWI34G0866 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 5.3e-109 398.3 288 68.8
arahy.Tifrunner.gnm1.ann1.Z4VD8H Arachis hypogaea HOM05D005681 ORTHO05D007274 6.9e-109 397.9 300 65.3
ClCG08G012350 Citrullus lanatus HOM05D005681 ORTHO05D007274 6.9e-109 397.9 298 68.8
AUR62009315 Chenopodium quinoa HOM05D005681 ORTHO05D007274 1.5e-108 396.7 300 66.7
MBI01_g15703_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 2.0e-108 396.4 304 70.1
Nn3g18081 Nelumbo nucifera HOM05D005681 ORTHO05D007274 2.0e-108 396.4 283 70.7
AT4G32750 Arabidopsis thaliana HOM05D005681 ORTHO05D007274 3.4e-108 395.6 301 67.8
Sc23g0005990 Simmondsia chinensis HOM05D005681 ORTHO05D007274 4.5e-108 395.2 288 67.4
Hund03415 Selenicereus undatus HOM05D005681 ORTHO05D007274 5.9e-108 394.8 301 66.4
TPR.G1346 Trifolium pratense HOM05D005681 ORTHO05D007274 5.9e-108 394.8 303 67.0
Eucgr.C02898 Eucalyptus grandis HOM05D005681 ORTHO05D007274 7.7e-108 394.4 303 66.7
Phvul.009G107000 Phaseolus vulgaris HOM05D005681 ORTHO05D007274 1.0e-107 394.0 301 67.1
Aqoxy7G01593 Aquilegia oxysepala HOM05D005681 ORTHO05D007274 2.9e-107 392.5 301 64.1
Cfa013349 Carpinus fangiana HOM05D004668 ORTHO05D006460 5.0e-107 391.7 293 66.6
MELO3C011155.2 Cucumis melo HOM05D005681 ORTHO05D007274 5.0e-107 391.7 287 69.0
Medtr3g110075 Medicago truncatula HOM05D005681 ORTHO05D007274 1.9e-106 389.8 298 65.8
BcaB03g12761 Brassica carinata HOM05D005681 ORTHO05D007274 3.2e-106 389.0 301 67.1
CARHR240740 Cardamine hirsuta HOM05D005681 ORTHO05D007274 5.5e-106 388.3 300 67.0
Carub.0007s0774 Capsella rubella HOM05D005681 ORTHO05D007274 9.4e-106 387.5 300 65.3
COL.COLO4_18685 Corchorus olitorius HOM05D005681 ORTHO05D007274 9.4e-106 387.5 322 63.7
Lalb_Chr08g0243221 Lupinus albus HOM05D005681 ORTHO05D007274 2.1e-105 386.3 301 64.8
MD15G1096600 Malus domestica HOM05D005681 ORTHO05D007274 7.9e-105 384.4 284 66.5
A08p17930 Brassica napus HOM05D005681 ORTHO05D007274 1.0e-104 384.0 302 66.9
BraA08t33745Z Brassica rapa HOM05D005681 ORTHO05D007274 1.0e-104 384.0 302 66.9
Thhalv10025880m.g Eutrema salsugineum HOM05D005681 ORTHO05D007274 2.3e-104 382.9 301 65.4
Sp7g30510 Schrenkiella parvula HOM05D005681 ORTHO05D007274 2.3e-104 382.9 300 65.0
Prupe.1G451500 Prunus persica HOM05D005681 ORTHO05D007274 3.0e-104 382.5 284 67.3
Lj7A706G35 Lonicera japonica HOM05D005681 ORTHO05D007274 5.1e-104 381.7 304 66.4
BolC3t21001H Brassica oleracea HOM05D005681 ORTHO05D007274 6.7e-104 381.3 302 66.6
Sed0017759 Sechium edule HOM05D005681 ORTHO05D007274 8.8e-104 380.9 298 66.4
C03p87050 Brassica napus HOM05D005681 ORTHO05D007274 1.5e-103 380.2 302 66.6
Ah.10g035130 Amaranthus hybridus HOM05D005681 ORTHO05D007274 9.7e-103 377.5 287 65.5
Aa31LG2G17210 Aethionema arabicum HOM05D005681 ORTHO05D007274 2.2e-102 376.3 299 63.5
Potri.018G038600 Populus trichocarpa HOM05D005681 ORTHO05D007274 3.7e-102 375.6 301 63.1
Sed0026422 Sechium edule HOM05D005681 ORTHO05D007274 1.1e-101 374.0 303 64.7
Sabra06G0188600 Salix brachista HOM05D005681 ORTHO05D007274 2.4e-101 372.9 301 63.1
RcHm_v2.0_Chr6g0305881 Rosa chinensis HOM05D005681 ORTHO05D007274 3.1e-101 372.5 285 66.3
Haze_21866 Corylus avellana HOM05D005681 ORTHO05D007274 2.0e-100 369.8 377 52.8
Sabra18G0039000 Salix brachista HOM05D005681 ORTHO05D007274 2.6e-100 369.4 301 62.8
FvH4_2g35990 Fragaria vesca HOM05D005681 ORTHO05D007274 1.0e-99 367.5 286 66.4
CSS0012406 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 2.2e-99 366.3 289 66.1
ATR0315G043 Amborella trichopoda HOM05D005681 ORTHO05D007274 2.5e-98 362.8 305 62.6
FAN20G2636 Fragaria x ananassa HOM05D005681 ORTHO05D007274 7.2e-98 361.3 286 65.7
Nn2g11688 Nelumbo nucifera HOM05D005681 ORTHO05D007274 1.0e-96 357.5 253 71.5
HanXRQChr08g0236281 Helianthus annuus HOM05D005681 ORTHO05D007274 5.2e-96 355.1 301 63.5
Cpa.g.sc78.73 Carica papaya HOM05D005681 ORTHO05D007274 3.3e-95 352.4 455 45.7
CANSAT80G1365 Cannabis sativa HOM05D005681 ORTHO05D007274 9.7e-95 350.9 301 61.1
ECA246G0085 Erigeron canadensis HOM05D005681 ORTHO05D007274 3.8e-91 339.0 267 67.8
MD08G1117000 Malus domestica HOM05D005681 ORTHO05D007274 1.1e-90 337.4 280 62.9
BcaC09g52069 Brassica carinata HOM05D005681 ORTHO05D007274 1.8e-88 330.1 292 62.0
FAN15G0799 Fragaria x ananassa HOM05D004668 ORTHO05D006460 4.0e-88 328.9 262 64.9
HPP92_006301 Vanilla planifolia HOM05D005681 ORTHO05D007274 4.0e-88 328.9 287 59.6
HPP92_006306 Vanilla planifolia HOM05D005681 ORTHO05D007274 1.2e-87 327.4 287 59.6
A01p05570 Brassica napus HOM05D005681 ORTHO05D007274 3.5e-84 315.8 299 59.2
Os02g0272400 Oryza sativa ssp. japonica HOM05D005681 ORTHO05D007274 1.5e-82 310.5 302 56.0
Gohir.D06G095800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 2.1e-81 306.6 210 72.9
CsaV3_2G031020 Cucumis sativus L. HOM05D005681 ORTHO05D007274 2.2e-78 296.6 192 74.5
Dinv30480 Davidia involucrata HOM05D005681 ORTHO05D007274 2.8e-78 296.2 266 58.6
BolC7t46377H Brassica oleracea HOM05D005681 ORTHO05D007274 6.3e-78 295.0 218 67.0
Zm00001eb203450 Zea mays HOM05D005681 ORTHO05D007274 4.1e-77 292.4 290 55.2
AUR62043614 Chenopodium quinoa HOM05D005681 ORTHO05D007274 1.2e-73 280.8 300 51.3
AUR62029668 Chenopodium quinoa HOM05D005681 ORTHO05D007274 3.6e-73 279.3 300 51.3
Duzib168G1957 Durio zibethinus HOM05D005681 ORTHO05D007274 9.8e-71 271.2 280 52.9
AagrBONN_evm.TU.Sc2ySwM_362.2150 Anthoceros agrestis HOM05D005681 ORTHO05D007274 1.7e-70 270.4 281 50.5
CDE04G0437 Ceratophyllum demersum HOM05D005681 ORTHO05D007274 1.4e-69 267.3 280 50.7
DCAR_000748 Daucus carota HOM05D005681 ORTHO05D007274 4.5e-68 262.3 166 76.5
Oeu008286.1 Olea europaea HOM05D005681 ORTHO05D007274 3.8e-67 259.2 168 76.2
Lsat_1_v5_gn_1_49740 Lactuca sativa HOM05D005681 ORTHO05D007274 6.6e-67 258.5 285 49.1
Mapoly0093s0011 Marchantia polymorpha HOM05D005681 ORTHO05D007274 1.4e-64 250.8 278 46.8
Oeu008289.1 Olea europaea HOM05D005681 ORTHO05D007274 1.4e-64 250.8 168 74.4
Pp3c7_12500 Physcomitrium patens HOM05D005681 ORTHO05D007274 5.2e-64 248.8 276 47.8
BcaNung03601 Brassica carinata HOM05D005681 ORTHO05D007274 4.6e-60 235.7 260 53.5
Pp3c2_21260 Physcomitrium patens HOM05D005681 ORTHO05D007274 3.6e-57 226.1 281 45.6
SMO347G0207 Selaginella moellendorffii HOM05D005681 ORTHO05D007274 8.0e-57 224.9 282 46.1
BraA01t00528Z Brassica rapa HOM05D005681 ORTHO05D007274 1.2e-52 211.1 167 68.3
C07p59310 Brassica napus HOM05D005681 ORTHO05D007274 4.3e-50 202.6 273 47.3
BcaNung04523 Brassica carinata HOM05D005681 ORTHO05D007274 9.5e-50 201.4 220 53.6
Oeu012191.1 Olea europaea HOM05D005681 ORTHO05D007274 3.1e-40 169.9 135 66.7
AUR62043618 Chenopodium quinoa HOM05D005681 ORTHO05D007274 1.9e-37 160.6 117 66.7
MBI01_g30752_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 1.1e-34 151.4 147 58.5
Oeu031829.2 Olea europaea HOM05D005681 ORTHO05D007274 6.9e-24 115.5 135 50.4
ATR0051G031 Amborella trichopoda HOM05D005681 ORTHO05D007274 1.3e-17 94.7 79 62.0
A03p61560 Brassica napus HOM05D005681 ORTHO05D040333 5.5e-13 79.3 248 33.9
BraA03t15198Z Brassica rapa HOM05D005681 ORTHO05D040333 3.1e-08 63.5 185 34.1


User provided reference genes

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